Domain Predictions — View

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PF14523

Source: Pfam

Description

Syntaxin-like protein

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0016020 View details of GO:0016020 AmiGO InterPro QuickGO	Cellular component	Membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.	Subterm of GO:0005575

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0213939.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: syntaxin-22-like [Cicer arietinum] gi\|502106946\|ref\|XP_004493107.1\|	Domains PF14523 PTHR19957 PTHR19957:SF138 mobidb-lite	5
Lj1g3v3932450.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Syntaxin-22 [Medicago truncatula] gi\|357508487\|ref\|XP_003624532.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.58.70 IPR000727 IPR006011 IPR010989 NON_CYTOPLASMIC_DOMAIN PF05739 PF14523 PS50192 PTHR19957 PTHR19957:SF138 SM00397 SM00503 SSF47661 TMhelix TRANSMEMBRANE cd15840 mobidb-lite	18
Lj2g3v1498190.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: LOW QUALITY PROTEIN: syntaxin-22-like [Cucumis sativus] gi\|449517098\|ref\|XP_004165583.1\|	Domains G3DSA:1.20.58.70 IPR010989 PF14523 PTHR19957 PTHR19957:SF120 SSF47661	6
Lj4g3v1107690.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: syntaxin-22-like [Glycine max] gi\|356496277\|ref\|XP_003516995.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.58.70 IPR000727 IPR006011 IPR006012 IPR010989 NON_CYTOPLASMIC_DOMAIN PF05739 PF14523 PS00914 PS50192 PTHR19957 PTHR19957:SF120 SM00397 SM00503 SSF47661 TMhelix TRANSMEMBRANE cd00179 cd15840 mobidb-lite	21
LotjaGi1g1v0636300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Syntaxin-like protein; TAIR: AT5G46860.1 Syntaxin/t-SNARE family protein; Swiss-Prot: sp\|P93654\|SYP22_ARATH Syntaxin-22; TrEMBL-Plants: tr\|I3S6S6\|I3S6S6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0636300	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.5.110 G3DSA:1.20.58.70 IPR000727 IPR006011 IPR010989 NON_CYTOPLASMIC_DOMAIN PF05739 PF14523 PS50192 PTHR19957 PTHR19957:SF267 SM00397 SM00503 SSF47661 TMhelix TRANSMEMBRANE cd15840 mobidb-lite	19
LotjaGi2g1v0335500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Syntaxin; TAIR: AT5G46860.1 Syntaxin/t-SNARE family protein; Swiss-Prot: sp\|P93654\|SYP22_ARATH Syntaxin-22; TrEMBL-Plants: tr\|I1J4T0\|I1J4T0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0335500	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.5.110 G3DSA:1.20.58.70 IPR000727 IPR006011 IPR006012 IPR010989 NON_CYTOPLASMIC_DOMAIN PF05739 PF14523 PS00914 PS50192 PTHR19957 PTHR19957:SF256 SM00397 SM00503 SSF47661 TMhelix TRANSMEMBRANE	19
LotjaGi4g1v0169100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Syntaxin; TAIR: AT5G46860.1 Syntaxin/t-SNARE family protein; Swiss-Prot: sp\|P93654\|SYP22_ARATH Syntaxin-22; TrEMBL-Plants: tr\|I3SK89\|I3SK89_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0169100	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.5.110 G3DSA:1.20.58.70 IPR000727 IPR006011 IPR006012 IPR010989 NON_CYTOPLASMIC_DOMAIN PF05739 PF14523 PS00914 PS50192 PTHR19957 PTHR19957:SF256 SM00397 SM00503 SSF47661 TMhelix TRANSMEMBRANE cd00179 cd15840	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd15840	CDD	1	14.29