Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0379100 |
| Transcript ID | LotjaGi1g1v0379100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Two-component response regulator; TAIR: AT4G31920.1 response regulator 10; Swiss-Prot: sp|B8AEH1|ORR23_ORYSI Two-component response regulator ORR23; TrEMBL-Plants: tr|A0A0S3RCH7|A0A0S3RCH7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0379100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:86000229..86005648) extracted from Lotus japonicus Gifu genome v1.2.
TCACAAACTCTCTTCCTTATTTTATCTATGACAAATAATGTGTTACTTTGACTTCCCTCCACCCTCACTCTTCCCACACC CACAATGAGAGCATTGATATTGACAATTAATTTGATTTTTCAATACGTTAATTGATTGACATTTAATAATATGATCCACA TAATTTCTCTAGTCAATAGCAATCCATGGCCTAAATTCTTACTATTTCCTTTGTTGTTACGTTTTAGTCATCTATCACCT TAAATACATTAATGTTATGAATTTATTCCTACTTATTGTCTGATTTGATGAAAATCACAACCTGCAACTTCATGCTATGA TAAAAGGGCACAGTGGCAGCAAATCCTTTATCCAATATCCAAAATCACATTCTTTTGTTTCATTGCTTTCTGCGTCTCGA GTGCACGAATCAGATCGTAGAGCAAAACCGGGACTTTAGATTTAGTGAGTAGGTGAGTATCTCTTTTCTTCTCAAATAAT TTAGTAGAAGGAAGTAGATTACAGTCAGATTCCACCTTTTAGCTTAGTGCTTAGTGACTCAAAAAAAAAGACATCCACTT TCTTGCTTCTTCCTTTATTCTTAAGACCCTCATTTTATGTTTTCTGCTAAAAATATATTTGGTTGATGATTGCTTCAGTT TCCAGAAGAACAGAATGGAAGATCAGTTTCCCAAAGGAATGCGTGTTCTTGCCGTCGATGATGACCCTACTTGCCTCTTC GTTTTGGAAACCCTGCTCCGAAGATGTCAATATCACGGTCCGTTTCTTCTTCTTCTTCTTAACTTTTTCTGTTCAGAATG ATACTTATCTTATGTATGGCTTGGGATTGCAGTAACTACGACAAGTCAAGCAAAAACAGCATTGACGCTGTTGAGAGAAA ACAAAGGCCAGTTTGACCTGGTAATCAGTGATGTGCACATGCCAGACATGGATGGATTTAAGCTTCTTGAACTTGTTGGA CTTGAAATGGACCTTCCTGTCATAAGTAAGCAGATATGTTTTATATAATCTTCAAAACTTTAGATTTTTACCATTTCTTA ATCATGGCCCTCATTGGTTGATTATGGGTATAGACGTATAGTTATTGATCAATATAGATTCAGGGGAAATTCAGATTTTT TTCAATAATCAGTTTTCTTACTATGCTCGTGTATTTTTACTCAAGTATATTATATTTACTGCTAGCATGTTTGGTTCAAT GGCGAAATGTTCTAAGAGACAATTCTGATTAGAAGCTATGAGTCTTAGCTTTTGAGTAAACGTGCCTTCGATTATATACA AATCATGAAACCAAACATGCTGTTAATAATGTTCTTAGTCCTACCAAAGAATTTGTTCAAGTTTCAAAATTGATTTTTTA TAAGCATGAAGCTGTGACTTGCGAATAAACTCATTTAGGAAAGCTTTATTTTAAATTGTGATGTATATTGAATGATTGTT TGGCAAACCTTTGATGGTATAAAATGTTTGATTTCAGTGCTTTCTGCAAATGGGGATACAAAGTTGGTGATGAAGGGGAT TTCTCACGGGGCCTGCGATTATCTGCTGAAGCCTGTGAGAATGGAGGAGCTAAAGAACATTTGGCAGCATGTGATCAGGA GGAAGAAGTTTGATCCAAAGGAGAAGACCAAAACCAGCAACCTTGATAAACCAGCTTCTGATAGTGGAAAGTTGACTAAA AAGAGGAAGGATCAAGATGAAGGTGCAGATGAGGAGCAAGAGAATGATCATGACGCTGAGGATCCATCAAACCCGAAGAA GCCTCGGGTTGTTTGGTCTGTGGAGCTGCACGGCAAGTTCGTTGCTGCTGTTAATCAGCTAGGCATTGACAGTATGTTCT TTCCTCTGCCTACAACATACAAAACAATTGTTAATAGTTTTTATCAATTTCTCCAAGACCTTAATCAAATTCTTTCTCAT TTTATATCATCAAAATATATTTGAATATCCTAGAGGTCAGAATTATCAATCTGATTTCAGAATAATTTATAATATAGACA AGTGCCACTTTGAATAAATATCATGTCAAAATTATGACTCAAAATTTGTGTCTTATTGTGAAGTTCTTCATTACTGAATG GGTGTGGACCTCATGATGTTATTGTTTTGCTGGCAGAGGCTGTGCCTAAAAAGGTTCTTGATTTGATGAATGTTGAAAAG CTTACAAGGGAGAATGTGGCCAGCCATTTACAGGCACTGTTTCTTGCTCTCTTGACTTTTAGTTTAATATAACCTAAAAC TTTTATTTCCCTGAATGTTTCTGGTTTATGAATTGGCTGCAGAAATATAGGCTTTATCTGAAAAGAATTAGCTCACTTAG CTGCATGGCAAGCCAACAGACTAGTATGATGGCGGCCTTAGGGAGTATTGATCGATCCTATTTGAAAATGGGCTCTATGA GTGGGGTTGGACATTTGCAACCAGTAAATGGTCTTGGACAGTTTCATAATAATGCTTTCAAATCCTTTTCACCTAGTGGA ATAATTAGTAGATTGAACACTGCAGCTGGTCTGGATGTGCATGGATTTCAAACTTCCGGAGTACTTCAGTTGGGTCAATC ACAATATCTAAACAATTTCAAAGATGATCAGCTTAATATCCAGCCAGCCACAGTTCCTGTTAATCCTAATCGTGTTCGAG GAATGTCAGTGACTATGGGGCTTGATCAATTGCAAGATAATATGGGTGTCATTCCTGTTCAAAACATGACCACTGATTTT GATAGGAGAACAACTACTTCACCCATTTCAAATAAACTCCCAGATCAAAGAGCAAGAATAACCACTTCTGTCTCTCACAC ACCACTTTTGGGTAGCTTAAACAATGCCTTGATGTTGGAAACTCACCCTCAAGATAAACCAGGTGGTATAGGATATGAAA ATTCATCCTCTGCAGGAGCCTTCCAACATTCAGAAATTGCTTTCTCTTTGCTGGATAAAGGTAGATATACTGATAATTGG TCAAGCGACGTGAAGTCATCTGCGATCATGACAAATTCTTACCCTCCAAGTGAGTGTTTTAGACAAACAGCTACACCTCC TTCTATCGATAACATGGCTTCTTTACCCTTGCAAGGAGTGAATTTTACAAATAAGCCTGGGCAGACAAACAGTAACGTTC CATTTCAAGGGTGGGATGACCACAATCAGAATGCTACTTACTATTCAAATGTTATTGATGGATCAATAAGCTCTCCGACT ACAGTTAATGAAGCTGTTGTTCCAGCAGGCCATACTCCTACTAACTCAACCATGCCCAAAACCTTGGACTACAATTTTTG TGATCCCTTGCAAATGAAGCGTGATGGCTTCGTGGAGTTAACTGAAGACACCCCGTTGAAGCAACATCAGGGGAATATCA TGAACCAGCAGAAGCCTCAAGAAAGTTGCTTCTCTAATAATTTTGGTTCACTGGAAGACTTGGTCTATTCAATGATGGCA CAGGTAATAATATTTCTGTTATATAAAGAGGGTTTTCCCAAAGGTTTCTGTATGACTTCTTTTTTAACATATTTACTACA ATCAGTCTTCAGATGCTTGATGACTTTAAACCATTTGAAGTTCTGATTCAAGTACCTGGTGTTGTATCTGGTTCAAAACT TTCACTTAGGTACCATAACAGCATATTTAGATCTTTTGAATCAGGTTGATGCCACCTCAACCTTAATTTTCACGGATCTC GCACACTTTTTATTTATTTATATATTATTATGTCGCACTTGTTGTATGCCAATCTCCTTTGATTAGTAAAAGTACAATCA GTAGCCTGATGGAGAGTGTTACTCATTCACTACATGTTGTTGTCATGCAGGAGCAACATAAGATGAAACTATTGGATGCG GACCTCATTTGTGATAATTACTGTGGTGGGATATCAATGTTACAGCAAGTTTGGGACAATATATCAGCATCATGCTATCC TCGCTGATGAACTTTGTAGCATGATAAGTCTTCTACTAGTTTTCTGCAGGCTTTATCTTTTCCAGTTTTCTTTTTCCTGG GTGGTATCTAGATTTCTTCCTTTGAAGTGTTTGGTTTAGAGTTTTGTTGGAATTAGTTTGGTAGAATTGAGTTTGAAAAG TAGACCAAATCATTTTAATGTGGGCATTGATTTCATGTATGTTTGATTTTTTGTTGAATTTAATGTCGATCCACATTTGA GCCAAGGTGACAAAATCTTGTTTCTCAGTTGATGTGATGGGATGTATTTTTCTGTTTGCATCAACATAAAAAAGGCAGGA AATAATGTGGAAACTACAAAACTCAAACAAGGTGTTCACTTTATTTTCTCTTTTTATTTTTATTCTCTTTCTCTTCCTAT TTCTCTCATTTTTCTATCACACTCTTCCCATCTGTCTTCTATTTTTATCAATCACATATATTTTCGAAACCTTTTTGACA CTTTCGAAGGGCTAAAATACAGAAAATGGGGGAAGTTCTGATTGTTTCAGAATATGAACGTTGTTCCATATTTGAAGCCC CTCCAAAATGTCTAAGAAGTTTCTTAAGAAAGAGTACTTTCATTGTTTCATCAGTTCCTTGACGGGAATTAGATTTCCCA CCCCCTGTTTTAGAATTTCCACCCCATTTAAAAGTGGGGAAAAACCAATATTGCCCCTCCGTGTTTTAGTCCGAATGTAT AACATTCGGACTCCTCCGAATGTTCAAATGTCGGACTCAGTTAATAATAGAACAAAACTATCAATTCAGATTCACATTTG TAACGGGACAGAACATCAACTCTCGAAGGTCTCAAGAGAAGCGACCCAGAGGCACCCAAATCGACCCACACATCACGACC AAAAGCGACCAAGAATCATCTGTGTTTCAAAACCGACCACACTGAGGTAATTTGTTGGAATCCACGACCAAGAATCATTT GTATTTTGAATCATGTGTATTTTGATGAGTTGGTGTTGTGAATTCAAATTTAGGGTTTCAAATTTAGGTATTTCAGATTA GGTTAGGTTTCGAATCCCTTTTTATGAGTTGATTTGGTGAAATTTCATTCCTATTGTGATTTCTGGAGTATTTGGGGTTC TGAGGTGCGAATTTGGGGATATTCGTACTCCGAATCTTGAAGATTCGGAATGGTTCAGGACTTCAAGATTCGGACTGGTT CAGGACTTCAAGATTCGGACTTGAGAGATTCAGTATTGTCTCTCCTATTGCTTCTGTTATTGTTTTTCATGATAAGATGA ATGAGGTGAAGATAATTTCCATGCTTTTGGCTATCTTAGGGTAGTGGTTAAGGACATAACCAACTTGAGATTTCACATTT GAATTTCATAACATTATTTGAATGAGTAAAATACACTCACCCCCCTCAAGGTTTGCAAGAATGACACTCCACCCCATTTT TTATAAAGGCAAAATTTAATGACGAAAATGTTTTCGTCACTAATAAAAAATAATTACTAA
CDS sequence (LotjaGi1g1v0379100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGATCAGTTTCCCAAAGGAATGCGTGTTCTTGCCGTCGATGATGACCCTACTTGCCTCTTCGTTTTGGAAACCCT GCTCCGAAGATGTCAATATCACGTAACTACGACAAGTCAAGCAAAAACAGCATTGACGCTGTTGAGAGAAAACAAAGGCC AGTTTGACCTGGTAATCAGTGATGTGCACATGCCAGACATGGATGGATTTAAGCTTCTTGAACTTGTTGGACTTGAAATG GACCTTCCTGTCATAATGCTTTCTGCAAATGGGGATACAAAGTTGGTGATGAAGGGGATTTCTCACGGGGCCTGCGATTA TCTGCTGAAGCCTGTGAGAATGGAGGAGCTAAAGAACATTTGGCAGCATGTGATCAGGAGGAAGAAGTTTGATCCAAAGG AGAAGACCAAAACCAGCAACCTTGATAAACCAGCTTCTGATAGTGGAAAGTTGACTAAAAAGAGGAAGGATCAAGATGAA GGTGCAGATGAGGAGCAAGAGAATGATCATGACGCTGAGGATCCATCAAACCCGAAGAAGCCTCGGGTTGTTTGGTCTGT GGAGCTGCACGGCAAGTTCGTTGCTGCTGTTAATCAGCTAGGCATTGACAAGGCTGTGCCTAAAAAGGTTCTTGATTTGA TGAATGTTGAAAAGCTTACAAGGGAGAATGTGGCCAGCCATTTACAGGCACTGTTTCTTGCTCTCTTGACTTTTAGTTTA ATATAA
Protein sequence (LotjaGi1g1v0379100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDQFPKGMRVLAVDDDPTCLFVLETLLRRCQYHVTTTSQAKTALTLLRENKGQFDLVISDVHMPDMDGFKLLELVGLEM DLPVIMLSANGDTKLVMKGISHGACDYLLKPVRMEELKNIWQHVIRRKKFDPKEKTKTSNLDKPASDSGKLTKKRKDQDE GADEEQENDHDAEDPSNPKKPRVVWSVELHGKFVAAVNQLGIDKAVPKKVLDLMNVEKLTRENVASHLQALFLALLTFSL I
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 235 | 235 | 6.9E-139 | ||
| Gene3D | 2 | 143 | 142 | 5.1E-36 | – | |
| PANTHER | 2 | 230 | 229 | 6.8E-148 | – | |
| PANTHER | 2 | 230 | 229 | 6.8E-148 | – | |
| SUPERFAMILY | 7 | 133 | 127 | 1.31E-37 | ||
| SMART | 9 | 121 | 113 | 1.7E-32 | ||
| ProSiteProfiles | 10 | 125 | 116 | 43.489 | ||
| Pfam | 11 | 119 | 109 | 6.3E-25 | ||
| CDD | 12 | 125 | 114 | 1.35037E-27 | ||
| MobiDBLite | 132 | 180 | 49 | - | – | |
| MobiDBLite | 132 | 161 | 30 | - | – | |
| Gene3D | 176 | 236 | 61 | 1.7E-26 | – | |
| ProSiteProfiles | 177 | 236 | 60 | 10.621 | ||
| SUPERFAMILY | 178 | 234 | 57 | 9.14E-16 | ||
| TIGRFAM | 180 | 233 | 54 | 1.8E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi1g1v0379100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…