Domain Predictions — View

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PR00406

Source: PRINTS

Description

Cytochrome B5 reductase signature

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0016491 View details of GO:0016491 AmiGO InterPro QuickGO	Molecular function	Oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.	Subterm of GO:0003824
GO:0055114 View details of GO:0055114 AmiGO InterPro QuickGO	Biological process	Oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.	Subterm of GO:0008152

Associated Lotus transcripts 10

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0004199.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: NADH-cytochrome b5 reductase 1-like [Glycine max] gi\|356556724\|ref\|XP_003546673.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.40.30.10 G3DSA:3.40.50.80 IPR001433 IPR001709 IPR001834 IPR008333 IPR017927 IPR017938 NON_CYTOPLASMIC_DOMAIN PF00175 PF00970 PR00371 PR00406 PS51384 PTHR19370 PTHR19370:SF97 SFLDS00052 SSF52343 SSF63380 TMhelix TRANSMEMBRANE cd06183	23
Lj0g3v0006719.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RecName: Full=Nitrate reductase [NADH] gi\|730146\|sp\|P39869.1\|NIA_LOTJA	Domains G3DSA:2.40.30.10 G3DSA:2.60.40.650 G3DSA:3.10.120.10 G3DSA:3.40.50.80 G3DSA:3.90.420.10 IPR000572 IPR001199 IPR001433 IPR001709 IPR001834 IPR005066 IPR008333 IPR008335 IPR012137 IPR014756 IPR017927 IPR017938 IPR018506 IPR022407 PF00173 PF00174 PF00175 PF00970 PF03404 PIRSF000233 PR00363 PR00371 PR00406 PR00407 PS00191 PS00559 PS50255 PS51384 PTHR19370 PTHR19370:SF100 SM01117 SSF52343 SSF55856 SSF56524 SSF63380 SSF81296 cd02112 cd06183	43
Lj1g3v4012860.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NADH:cytochrome b5 reductase [Vernicia fordii] gi\|55979111\|gb\|AAV69019.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.40.30.10 G3DSA:3.40.50.80 IPR001433 IPR001834 IPR008333 IPR017927 IPR017938 NON_CYTOPLASMIC_DOMAIN PF00175 PF00970 PR00406 PS51384 PTHR19370 PTHR19370:SF97 SSF52343 SSF63380 TMhelix TRANSMEMBRANE cd06183	20
Lj1g3v4012860.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NADH:cytochrome b5 reductase [Vernicia fordii] gi\|55979111\|gb\|AAV69019.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.40.30.10 G3DSA:3.40.50.80 IPR001433 IPR001709 IPR001834 IPR008333 IPR017927 IPR017938 NON_CYTOPLASMIC_DOMAIN PF00175 PF00970 PR00371 PR00406 PS51384 PTHR19370 PTHR19370:SF111 SFLDS00052 SSF52343 SSF63380 TMhelix TRANSMEMBRANE cd06183	23
Lj4g3v1876780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: NADH-cytochrome b5 reductase-like protein-like [Cicer arietinum] gi\|502151601\|ref\|XP_004508521.1\|	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.80 IPR001433 IPR001709 IPR001834 IPR008333 IPR017927 IPR017938 PF00175 PF00970 PR00371 PR00406 PS51384 PTHR19370 PTHR19370:SF90 SFLDS00052 SSF52343 SSF63380 SignalP-TM_GRAM_POSITIVE cd06183	20
LotjaGi1g1v0152000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nitrate reductase; TAIR: AT1G77760.1 nitrate reductase 1; Swiss-Prot: sp\|P39869\|NIA_LOTJA Nitrate reductase [NADH]; TrEMBL-Plants: tr\|E7ELN7\|E7ELN7_MEDTR Nitrate reductase; Found in the gene: LotjaGi1g1v0152000	Domains G3DSA:2.40.30.10 G3DSA:2.60.40.650 G3DSA:3.10.120.10 G3DSA:3.40.50.80 G3DSA:3.90.420.10 IPR000572 IPR001199 IPR001433 IPR001709 IPR001834 IPR005066 IPR008333 IPR008335 IPR012137 IPR014756 IPR017927 IPR017938 IPR018506 IPR022407 IPR036374 IPR036400 IPR039261 PF00173 PF00174 PF00175 PF00970 PF03404 PIRSF000233 PR00363 PR00371 PR00406 PR00407 PS00191 PS00559 PS50255 PS51384 PTHR19370 PTHR19370:SF195 SM01117 SSF52343 SSF55856 SSF56524 SSF63380 SSF81296 cd02112 cd06183	46
LotjaGi1g1v0650100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NADH:cytochrome b5 reductase; TAIR: AT5G17770.1 NADH:cytochrome B5 reductase 1; Swiss-Prot: sp\|Q9ZNT1\|NB5R1_ARATH NADH--cytochrome b5 reductase 1; TrEMBL-Plants: tr\|Q5PY86\|Q5PY86_VERFO NADH:cytochrome b5 reductase; Found in the gene: LotjaGi1g1v0650100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.40.30.10 G3DSA:3.40.50.80 IPR001433 IPR001709 IPR001834 IPR008333 IPR017927 IPR017938 IPR039261 NON_CYTOPLASMIC_DOMAIN PF00175 PF00970 PR00371 PR00406 PS51384 PTHR19370 PTHR19370:SF194 SSF52343 SSF63380 TMhelix TRANSMEMBRANE cd06183	23
LotjaGi1g1v0650100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NADH-cytochrome b5 reductase; TAIR: AT5G17770.1 NADH:cytochrome B5 reductase 1; Swiss-Prot: sp\|Q9ZNT1\|NB5R1_ARATH NADH--cytochrome b5 reductase 1; TrEMBL-Plants: tr\|G7L2L3\|G7L2L3_MEDTR NADH-cytochrome b5 reductase; Found in the gene: LotjaGi1g1v0650100	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.80 IPR001433 IPR001709 IPR001834 IPR008333 IPR017927 IPR017938 IPR039261 PF00175 PF00970 PR00371 PR00406 PS51384 PTHR19370 PTHR19370:SF194 SSF52343 SSF63380 cd06183	19
LotjaGi3g1v0303000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NADH-cytochrome b5 reductase; TAIR: AT5G17770.1 NADH:cytochrome B5 reductase 1; Swiss-Prot: sp\|Q9ZNT1\|NB5R1_ARATH NADH--cytochrome b5 reductase 1; TrEMBL-Plants: tr\|A0A0B2S831\|A0A0B2S831_GLYSO NADH-cytochrome b5 reductase; Found in the gene: LotjaGi3g1v0303000	Domains CYTOPLASMIC_DOMAIN G3DSA:2.40.30.10 G3DSA:3.40.50.80 IPR001433 IPR001709 IPR001834 IPR008333 IPR017927 IPR017938 IPR039261 NON_CYTOPLASMIC_DOMAIN PF00175 PF00970 PR00371 PR00406 PS51384 PTHR19370 PTHR19370:SF191 SSF52343 SSF63380 TMhelix TRANSMEMBRANE cd06183	23
LotjaGi4g1v0268900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NADH-cytochrome b5 reductase; TAIR: AT5G20080.1 FAD/NAD(P)-binding oxidoreductase; Swiss-Prot: sp\|P83291\|NB5R2_ARATH NADH-cytochrome b5 reductase-like protein; TrEMBL-Plants: tr\|A0A0L9TR48\|A0A0L9TR48_PHAAN NADH-cytochrome b5 reductase; Found in the gene: LotjaGi4g1v0268900	Domains CYTOPLASMIC_DOMAIN G3DSA:2.40.30.10 G3DSA:3.40.50.80 IPR001433 IPR001709 IPR001834 IPR008333 IPR017927 IPR017938 IPR039261 NON_CYTOPLASMIC_DOMAIN PF00175 PF00970 PR00371 PR00406 PS51384 PTHR19370 PTHR19370:SF171 SSF52343 SSF63380 SignalP-TM TRANSMEMBRANE cd06183	23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd06183	CDD	1	10.00