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PTHR11097:SF9

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000178
Cellular component Exosome (RNase complex) A ribonuclease complex that has 3-prime to 5-prime exoribonuclease activity and possibly endoribonuclease activity, producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured.
Subterm of
GO:0006396
Biological process RNA processing Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
Subterm of
Part of
GO:0006401
Biological process RNA catabolic process The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
Subterm of

Associated Lotus transcripts 9

Transcript Name Description Predicted domains Domain count
Lj0g3v0273479.1
– PREDICTED: exosome complex component RRP43-like [Glycine max] gi|356526509|ref|XP_003531860.1|
Domains
14
Lj4g3v0987840.1
– PREDICTED: exosome complex component RRP43-like [Glycine max] gi|356526509|ref|XP_003531860.1|
Domains
10
LotjaGi4g1v0121200.1
– Exosome complex component; TAIR: AT1G60080.1 3'-5'-exoribonuclease family protein; Swiss-Prot: sp|Q2KHU3|EXOS8_BOVIN Exosome complex component RRP43; TrEMBL-Plants: tr|A0A151QPU2|A0A151QPU2_CAJCA Exosome complex exonuclease RRP43; Found in the gene: LotjaGi4g1v0121200
Domains
13
LotjaGi4g1v0121200.2
– Exosome complex component; TAIR: AT1G60080.1 3'-5'-exoribonuclease family protein; Swiss-Prot: sp|Q2KHU3|EXOS8_BOVIN Exosome complex component RRP43; TrEMBL-Plants: tr|A0A151QPU2|A0A151QPU2_CAJCA Exosome complex exonuclease RRP43; Found in the gene: LotjaGi4g1v0121200
Domains
13
LotjaGi4g1v0121200.3
– Exosome complex component; TAIR: AT1G60080.1 3'-5'-exoribonuclease family protein; Swiss-Prot: sp|Q2KHU3|EXOS8_BOVIN Exosome complex component RRP43; TrEMBL-Plants: tr|A0A151QPU2|A0A151QPU2_CAJCA Exosome complex exonuclease RRP43; Found in the gene: LotjaGi4g1v0121200
Domains
13
LotjaGi6g1v0013300.1
– Exosome complex component; TAIR: AT1G60080.1 3'-5'-exoribonuclease family protein; Swiss-Prot: sp|Q96B26|EXOS8_HUMAN Exosome complex component RRP43; TrEMBL-Plants: tr|I1KWF8|I1KWF8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0013300
Domains
14
LotjaGi6g1v0013300.2
– Exosome complex component; TAIR: AT1G60080.1 3'-5'-exoribonuclease family protein; Swiss-Prot: sp|Q2KHU3|EXOS8_BOVIN Exosome complex component RRP43; TrEMBL-Plants: tr|A0A151QPU2|A0A151QPU2_CAJCA Exosome complex exonuclease RRP43; Found in the gene: LotjaGi6g1v0013300
Domains
14
LotjaGi6g1v0013300.3
– Exosome complex component; TAIR: AT1G60080.1 3'-5'-exoribonuclease family protein; Swiss-Prot: sp|Q96B26|EXOS8_HUMAN Exosome complex component RRP43; TrEMBL-Plants: tr|I1MA04|I1MA04_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0013300
Domains
14
LotjaGi6g1v0013300.4
– Exosome complex component; TAIR: AT1G60080.1 3'-5'-exoribonuclease family protein; Swiss-Prot: sp|Q96B26|EXOS8_HUMAN Exosome complex component RRP43; TrEMBL-Plants: tr|I1KWF8|I1KWF8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0013300
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd11369 CDD 1 11.11