Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PTHR11439:SF265

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 23

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0069200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|B8YLY7\|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0069200	Domains G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00098 PF00665 PF07727 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF265 SM00343 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	25
LotjaGi1g1v0097700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TIH6\|A0A151TIH6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0097700_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF265 SSF53098	9
LotjaGi1g1v0107400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TNK0\|A0A151TNK0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0107400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF265 SSF53098	11
LotjaGi1g1v0226500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0226500_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF265 SSF53098	9
LotjaGi1g1v0255700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q9C739\|Q9C739_ARATH Copia-type polyprotein, putative; Found in the gene: LotjaGi1g1v0255700_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 NON_CYTOPLASMIC_DOMAIN PF00665 PS50994 PTHR11439 PTHR11439:SF265 SSF53098 TRANSMEMBRANE	12
LotjaGi1g1v0384600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RCT9\|A0A151RCT9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0384600_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF265 SSF53098 mobidb-lite	10
LotjaGi1g1v0521400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151REJ2\|A0A151REJ2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0521400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR036397 IPR043502 PF00665 PF07727 PS50994 PTHR11439 PTHR11439:SF265 SSF53098 SSF56672 mobidb-lite	14
LotjaGi2g1v0014800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) (ChrM); Swiss-Prot: sp\|P92520\|M820_ARATH Uncharacterized mitochondrial protein AtMg00820; TrEMBL-Plants: tr\|A5BUY4\|A5BUY4_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0014800_LC	Domains PTHR11439 PTHR11439:SF265 mobidb-lite	4
LotjaGi2g1v0092600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi2g1v0092600_LC	Domains IPR012337 PTHR11439 PTHR11439:SF265 SSF53098 mobidb-lite	5
LotjaGi2g1v0199200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151SQP0\|A0A151SQP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0199200_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR11439 PTHR11439:SF265 TRANSMEMBRANE mobidb-lite	7
LotjaGi2g1v0220000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TNK0\|A0A151TNK0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0220000_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PS50994 PTHR11439 PTHR11439:SF265 SSF53098	8
LotjaGi2g1v0275100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151SZR9\|A0A151SZR9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0275100_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF265 SSF53098 SSF56672 SSF57756 mobidb-lite	18
LotjaGi2g1v0395500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TNK0\|A0A151TNK0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0395500_LC	Domains IPR013103 PF07727 PTHR11439 PTHR11439:SF265	4
LotjaGi3g1v0072400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151U6I4\|A0A151U6I4_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0072400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00665 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF265 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53098 SSF56672 mobidb-lite	21
LotjaGi3g1v0072400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151U6I4\|A0A151U6I4_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0072400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00665 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF265 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53098 SSF56672 mobidb-lite	21
LotjaGi3g1v0242900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi3g1v0242900_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF265 SSF53098 mobidb-lite	10
LotjaGi4g1v0365200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TNK0\|A0A151TNK0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0365200_LC	Domains IPR012337 PTHR11439 PTHR11439:SF265 SSF53098	4
LotjaGi4g1v0424200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TNK0\|A0A151TNK0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0424200_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PS50994 PTHR11439 PTHR11439:SF265 SSF53098	8
LotjaGi5g1v0265600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151UBW1\|A0A151UBW1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0265600_LC	Domains G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR001878 IPR012337 IPR025724 IPR036397 IPR036875 PF00098 PF00665 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF265 SM00343 SSF53098 SSF57756 mobidb-lite	20
LotjaGi5g1v0321100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A5B194\|A5B194_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0321100_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PS50994 PTHR11439 PTHR11439:SF265 SSF53098 mobidb-lite	9
LotjaGi6g1v0037400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|B8YLY7\|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0037400	Domains G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00098 PF00665 PF07727 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF265 SM00343 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	25
LotjaGi6g1v0087400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QKV3\|A0A151QKV3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0087400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF265 SSF53098	9
LotjaGi6g1v0172100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|A0A151UDA6\|A0A151UDA6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0172100_LC	Domains IPR012337 PTHR11439 PTHR11439:SF265 SSF53098	4

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF53098	SUPERFAMILY	1	4.35