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LotjaGi6g1v0037400.1

Overview

Field Value
Gene ID LotjaGi6g1v0037400
Transcript ID LotjaGi6g1v0037400.1
Lotus japonicus genome version Gifu v1.2
Description Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0037400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:7361652..7368510) extracted from Lotus japonicus Gifu genome v1.2.

TTCCGGTCGCCCTTTGTGTCAACGAAAGTGGCTAAATGATCACTATCACAAGATAACAAGCAAGATACAGAGTTGCAAGT GTTGACAAATTGGCAAGATAACAATCATGAAGCAAAGTTGAAATTGTTGACTTGATAAAGATTGTTGAGCAAGTAGATGA CTTAATGCAACAGATATGGAAAAGGATAATGGTAAAGCCACTTTTGTGGCTGATCATCACGTGAATGGAAGGGCAGCCCA GCCTATAAATAGAGCACCATAGTTCCATTCAATTCATCCCAGCTAGCATTCGAGTATTGCTTCAAAGAGAGGAAAAATTC AGAGAGATAGAGAAATTAGTTTTCTTTGCATTCTCTTGTGAGGTTCTTCTAGTATGAGTTCTCCTATTTCAAGAGAGAGT GAAATTTGATCTCTCCTTGTATTTAGAGAGAGGTGTTGTAATTTCTTCCACTTAGTGAAAAGCTTTTCTACCGGTGCCCG TGGTTTTTCCCTTATCTGTTGAGGGTTTTCCACGTAAATATTGTGTGTCAATTTCCTACTCTCTCATCTCTTATTTTAGT TGCGTGACATTATCCTGCTACTCTGGTACCCAACAGTGGTATCAGAGCTGTTGGTGTCGGTCCTTATTCCGCTGCGGTGT ACGGTTACTATTCACACGTGTGGTTGTATACTTTTGCAGTGATTGTTAACGTATACTAGATCTATTCTAGTGTGCGGTAA AAATATACAATACTGCTCACGTATACTGTGCTATTCACGGTGAAATTGTGTAAACCGGTTCCGTGAAGAAAAAAAAATGG CAGCAAAATTTGAGATCCCGAAATTCAATGGGAGTAACTTCTCCCTGTGGAAATTGAAGATAAAGGCGATCCTGAGGAAG GATAATTGCTTACCAGCAATTGATGGTAGACCTGCTGATATAACTGATGAAAAGTGGAAAGAGATGGACGACAATGCTGT AGCCAATTTGCACCTATCAGTGGCAGATTCAGTTTTGTCCAGTATTGCTGAAAAGAAAACAGCAAAGGAGATCTGGGATA CTCTTATCCAACTGTACGAGGTCAAGTCACTTCACAACAGAATTTTCTTAAAGAGGAGACTCTACACTTTTCGAATGAGT GAATCCACTTCGATGCCGGATCACATCAACAATCTGAACACAATGTTTGCTCAACTATCTGCATCAGATTTCACAATTGG GGAAAATGAACGTGCAGAGGTTCTTCTTCAGAGTTTACCAGATTCATATGATCAACTCGTCATCAATATTACAAACAATA ATATTGTTGACCGTCTATCCTTTAATGATATTGCCGGAGCTATTCTTGAAGAAGAGTCCAAGCGGAAAAATAAGGAAGAT CGTCAGGAGAGCTCAAAACAAATGGAAGCTTTGACGGTGACGAGAGGCAGATCAACAGAGCGTGGCCCCAGTGGGAGTCA GAACCATGGTAGATCAAAATCTCGAAGAAAGACAAATCTCAAATGCTACAATTGTGGCAAGAGAGGGCACTTGAAGAAAG ATTGTTGGGCCAACAAGAAGAGTGGTGAAAAATCTTCTGAAGCAAGTACATCTCAAGGATGTGTTGCTAGTACCTCTGAT GATGGAGAAGTCCTATACAGCGAAGCAGCAGTTAGTACCAAAGGCAAAAATCGTCTCATTGATGTTTGGATAGTAGATTC AGGAGCAACATGGCACATGACCCCACGACGAGATTGGTTTTGCACTTATGAGCCTGTCTCAGAAGGAAACGTGTTCATGG GAAACGATCATGCTTTGGAAATTGTTGGAATTGGTACTGTCAAAATAAAAATGTATGATGGTACCATTCGCACACTTCAA GAGGTACGACATGTGAAAGGGTTAGCAAAGAATTTGTTGTCTGTTGGGCAACTAGATGACCTCGGATACAAGTACGATAT TCAAGGTGGGATCTTGAAAGTGGTGAAAGGTTCGCTAGTAGTAATGAAAGCAAAGAAGGTCGCTGCAAATCTATACATGC TTTTGGGAGATACGTGGCAAATGGCAGATGCATCAGTTGCAGTTGGAAGCCAAGAAGAAACAACGATGATGTGGCACCGC AGATTAGGCCATATGTCGAAACGAGGCTTGAAAGTTCTTGCAGAACGTAATCTCATACCTGGGCTCAAGTCAGTAAGTTT ACCTTTCTGTGAGCACTGTGTGATAAGTAAGCAGCATAGACTAAAGTTTGCTAAGTCAACTGCTAGAAGCAAACACATAC TGGACTTGATTCATTCTGATGTGTGGGAGTCACCGGAAGTATCCATAGGAGGAGCAAAGTATTTTGTATCATTCATTGAT GATTACTCCAGGAGATTGTGGGTGTACCCGATCAAGAAGAAGTCAGGTGTGTATTCAGTATTCAAGGAGTTCAAAGCACA AGTAGAACTTGAAACTGGGAAAAGAATTAAGTGCTTGAGGACAGATAATGGAGGAGAATATACAGATGGTGATTTCCTAG CATTCTGCAAGCAAGAAGGTATTACGAGACAATTTACAGTTGCTCATACACCTCAGCAGAATGGAGTAGCAGAGCGGATG AATAGAACTTTTCTGGAGAAGACAAGAGCTATGCTGAGAACAGCGGAATTAGGCAAGTCCTTCTGGGCAGAAGCTGTCAA AACTGCCTGTTATGTGATAAATCGATCGCCATCAACTGCGATTGATTTAAAGACACCAATGGAGATGTGGAAGGGAAAAC CAGGTAATTATTCTTCTCTACATGTGTTTGGATGTCCTGTGTATGTAATGTTCAACTCCCAAGAAAGAACAAAGCTGGAT CCAAAATCCAGGAGATGCATATTCGTGGGATATGCTGACAATGTAAAGGGGTATCGTCTGTGGGATCCCGCTGCCCACAA GATTATTGTCAGCAGAGATGTAATCTTTGTAGAAAATGAATTACAAAAGGAGCAGAAAAATGATGGCACTACAAAGGAGA CTGCTACAGTGGAGATAGAGGAAAAGTCAGGAGGAGATGATTCTTCTGAAGCAGAGCCAGAGCACGAAGAACAAGAACCA AATGAGGTCAATGATGAAGAACCCAGGAGAACAACACGTCAAATAAGAAAATCATCATGGCACTCAGAATATGTGATGGC AAGTCATGATGCATATTGTCTTCTATCAGAAGATGGAGAACCATCAACCTTTCAGGAGGCGTTAAATGGTTCAGATGCTT CGCTATGGATGGCAGCAATGCAGGAGGAGATTGAAGCCTTACATAGAAATAATACTTGGGAACTTGTTGAACTTCCTAAA GGTCGGAAAGCCATTGGCAACAAATGGGTGTTCAAAATCAAACGAGATGGCAACGATCAGGTGGAACGCTATCGTGCAAG ACTGGTGGTCAAAGGATATGCTCAGAAAGAAGGTATTGATTTTAATGAAATATTCTCTCCAGTAGTGAGACTTACAACTA TCAGAGAAGTCTTGGCAATGTGTGCCGCATTTGATCTACATCTTGAGCAACTTGATGTAAAGACTGCGTTTCTTCATGGA GAACTTGAAGAAGAAATCTATATGCTCCAACCAGAAGGCTTTAAAGATCATGAAAAAGAAAACTTGGTTTGCAGGTTGAC CAAATCTCTGTACGGTCTAAAGCAGGCGCCGAGGTGTTGGTACAAGAGATTTGATTCTTTCATCATGAGCCTTGGATACA ACAGGCTGAGTTCAGACCATTGTACGTACTACAAAAGGTTTGATGATAATGATTTCATCATTTTGCTGTTGTATGTGGAT GACATGTTGGTGGTAGGCCCCAACAAAGATCAAGTCCAAGAATTGAAGGCACAGTTGGCTAGGGAATTTGATATGAAAGA CTTGGGACCCGCAAACAAAATTTTAGAGATGCAAATTCACCGAGACAGAAAAGGCAGGAGGATTTGGCTTTCTCAGAAGA ATTATCTTCAGAAAGTCTTGCGGCGCTTCAACATGCAAGACTGTAACCAAATCTCAACCCCACTTCCTGTTAATTACAAA TTATCCTCAAGTATGATTCCTAGCAATGAAGCAGAGAGGATGGAGATGTCTCGAGTACCGTATGCATCAGCGGTGGGAAG CCTTATGTACGCTATGATTTGCACTAGGCCAGATATTGCTCAAGCAATTGGGACGGTCAGTCGGTTTATGGCAGATCCAG GCAAAGAGCACTGGAATGCTGTGAAGAGGATTCTGAGATACATCAAAGGAACCTCAGGTGCTGCGTTATGTTTTGGGGGA TCAGAATTCACTATCAGAGGCTATGTTGATTCAGACTTTGCAGGTGATCTTGATAAAAGAAAATCTACTACAGGCTATGT GTTCACACTTGCAGGAGGAGCAGTAAGCTGGTTATCCAAATTGCAGACTGTTGTAGCTTTGTCTACTACAGAAGCAGAAT ACATGGCAGCTACTCAAGCATGCAAGGAAGCTATTTGGATTCAAAGGTTGTTGGAAGAGCTCGGGCACAAGCAACAGAAG ATTATTGTGTATTGTGATAGTCAGAGCGCCTTGCACATTGCAAGGAATCCAGCCTTTCATTCCAGGACAAAGCACATAGG AGTTCAATACCATTTTGTCAGAGAGGTAGTAGAAGAAGGAAGCGTGGATATGCAGAAAATTCACACCAAAGACAACCTAG CAGATGTAATGATGAAGCCGATCAACTCTGATAAGTTTGCATGGTGTAGATCCTCCTATGGCCTATTAAAAATGTAAGCA GCATGGAACTGGCAAGGTAGAGAAATTTTGCAAACTCACAAAAGTGACTTTAAGTGGGAGATTGTCAACGAAAGTGGCTA AATGATCACTATCACAAGATAACAAGCAAGATACTGAGTTGCAAGTGTTGACAAATTGGCAAGATAACAATCATGAAGCA AAGTTGAAATTGTTGACTTGATAAAGATTGTTGAGCAAGTAGATGACTTAATGCAACAGATATGGAAAAGGATAATGGTA AAGCCACTTTTGTGGCTGATCATCACGTGAATGGAAGGGCAGCCCAGCCTATAAATAGAGCACCATAGTTCCATTCAATT CATCCCAGCTAGCATTCGAGTATTGCTTCAAAGAGAGGAAAAATTCAGAGAGATAGAGAAATGAGTTTTCTTTGCATTCT CTTGTGAGGTTCTTCTAGTATGAGTTCTCCTATTTCAAGAGAGAGTGAAATTTGTTCTCTCCTTGTATTTAGAGAGAGGT GTTGTAATTTCTTCCACTTAGTGAAAAGCTTTTCTACCGGTGCCCGTGGTTTTTCCCTTATCTGTTGAGGGTTTTCCACG TAAATATTGTGTGTCAATTTCCTACTCTCTCATATCTTATTTTAGTTGCGTGACATTATCCTGCTACTCTGGTACCCAAC ACTTTGCCACCGTCACCAGTCTCTTCCCCGCGTTCAAGACCTCCCCCAGCGTTCTCTCATCGTCGTACCGTCGCCGCGGT TACTGCCACTGTTATTAGAAGCCACCCAGATCTCGCCCTGCTCCTCTCTTCCCTTTTCTCCTTCGATCCTCTCCCTCTGT TTCGACCTCGCCACGTAGTATTTACACTCACCAATTTATATAATCTCTTAAGACATATGATTAAACCTTTTCAAAATTCA AAAACACAATCAAATATTTTCTTTACCATTAAAAGATTTAAAATATCAAATTCTAGGAGATCTAATTTAACTTCTCAAAA CTTCCAAAAATATTTTCTTTAATTCCGGGCTTATTCAAGTCTTTCAAAATCAATCCAGAACTTCTTCAAGCTCCTCAAAT TCCAGCTTCTTCAAGTCACTTTCAAAAAAAAAAGCTTCAAGACTCTCAAGATCAAATTCCGGCTTCTTTAAGCCTCTCAC GGTCAAGCTCCGACTTCTTCAAGCCTTTTCCAATCAAGCTTCTTGAAGCTTTCTCCAGCCCTTTCACATCAAGCTTTTTC AAGCTTTCCCTCAGAACTATGTTACCTTGATGTCTCTCTAAAGAGAATACATGGGCCGGGGAGCGATTCCGGTCAGGCAC CCCAAATTAAAATCATATTTAAACCCTAAGAACTATGTTGCCTTGAACCCCATTGCACATGGGGGATACGTAGACACAAG CCTCAAAAGCTTGTCGGGCCAAATCTGTAAATAACTCTTTTTCTTTTTCTTAATTAAATTCAATAATAAATCTATATAAT AAATAATAAATATTTTCTTGGGGTGAAATGAACATTTTAAAAGCTAAATATATTTTACACAATTAATTAGAGGTAACCGT TTATAAACGGGATCGTAGGGTGCTAGTACCTTCCATATGGGTAATCTACCCCTGGATCCAACTCTAATTGCGAAGATCAC ATCATTTTTCCTTCTTGCTTCCATCATATATACTTTAGACACACCCCTAATCCCCAATTTACAAACAATTCAAACCTTTG CAATGTAAACGGATCGAAGACTTTATCACCACCACCACTGTGCTTCCATCAGTTAAGAAGAAGAAAGAAGGGAACAAAAC CTGAACAATTCAGAGCCACTAACGAGCAAAGAAAAACCCAGATCAAGCCAGATCGAGACCAATGGAACACGAACCAAACC ATGGCTAAACGATATGGGTTTGTCACCTCCGCCGCGAGTTGTTCAACCTCCAGCCACCACGGCACTGGAGCTCTCCCATG CGAACTTCGTTCTCTCTGTAAGGCCCGAGTTTTTAAGTTCATGCTAAGTGAATAAACTTCTTATTCACGATTAGGGTTGA TGTAATGTGAAGGGAAACCTGAACGAAAGTTTTAAATGAAATATATTTATGAAGGAGAAAGTTCAGGAAAAGTTCAAGGA TTTCATTATGATCGATAAAAGCTATAGCACGAACGTTTTACGCTTAAACCTAGGTCAGA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0037400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAGCAAAATTTGAGATCCCGAAATTCAATGGGAGTAACTTCTCCCTGTGGAAATTGAAGATAAAGGCGATCCTGAG GAAGGATAATTGCTTACCAGCAATTGATGGTAGACCTGCTGATATAACTGATGAAAAGTGGAAAGAGATGGACGACAATG CTGTAGCCAATTTGCACCTATCAGTGGCAGATTCAGTTTTGTCCAGTATTGCTGAAAAGAAAACAGCAAAGGAGATCTGG GATACTCTTATCCAACTGTACGAGGTCAAGTCACTTCACAACAGAATTTTCTTAAAGAGGAGACTCTACACTTTTCGAAT GAGTGAATCCACTTCGATGCCGGATCACATCAACAATCTGAACACAATGTTTGCTCAACTATCTGCATCAGATTTCACAA TTGGGGAAAATGAACGTGCAGAGGTTCTTCTTCAGAGTTTACCAGATTCATATGATCAACTCGTCATCAATATTACAAAC AATAATATTGTTGACCGTCTATCCTTTAATGATATTGCCGGAGCTATTCTTGAAGAAGAGTCCAAGCGGAAAAATAAGGA AGATCGTCAGGAGAGCTCAAAACAAATGGAAGCTTTGACGGTGACGAGAGGCAGATCAACAGAGCGTGGCCCCAGTGGGA GTCAGAACCATGGTAGATCAAAATCTCGAAGAAAGACAAATCTCAAATGCTACAATTGTGGCAAGAGAGGGCACTTGAAG AAAGATTGTTGGGCCAACAAGAAGAGTGGTGAAAAATCTTCTGAAGCAAGTACATCTCAAGGATGTGTTGCTAGTACCTC TGATGATGGAGAAGTCCTATACAGCGAAGCAGCAGTTAGTACCAAAGGCAAAAATCGTCTCATTGATGTTTGGATAGTAG ATTCAGGAGCAACATGGCACATGACCCCACGACGAGATTGGTTTTGCACTTATGAGCCTGTCTCAGAAGGAAACGTGTTC ATGGGAAACGATCATGCTTTGGAAATTGTTGGAATTGGTACTGTCAAAATAAAAATGTATGATGGTACCATTCGCACACT TCAAGAGGTACGACATGTGAAAGGGTTAGCAAAGAATTTGTTGTCTGTTGGGCAACTAGATGACCTCGGATACAAGTACG ATATTCAAGGTGGGATCTTGAAAGTGGTGAAAGGTTCGCTAGTAGTAATGAAAGCAAAGAAGGTCGCTGCAAATCTATAC ATGCTTTTGGGAGATACGTGGCAAATGGCAGATGCATCAGTTGCAGTTGGAAGCCAAGAAGAAACAACGATGATGTGGCA CCGCAGATTAGGCCATATGTCGAAACGAGGCTTGAAAGTTCTTGCAGAACGTAATCTCATACCTGGGCTCAAGTCAGTAA GTTTACCTTTCTGTGAGCACTGTGTGATAAGTAAGCAGCATAGACTAAAGTTTGCTAAGTCAACTGCTAGAAGCAAACAC ATACTGGACTTGATTCATTCTGATGTGTGGGAGTCACCGGAAGTATCCATAGGAGGAGCAAAGTATTTTGTATCATTCAT TGATGATTACTCCAGGAGATTGTGGGTGTACCCGATCAAGAAGAAGTCAGGTGTGTATTCAGTATTCAAGGAGTTCAAAG CACAAGTAGAACTTGAAACTGGGAAAAGAATTAAGTGCTTGAGGACAGATAATGGAGGAGAATATACAGATGGTGATTTC CTAGCATTCTGCAAGCAAGAAGGTATTACGAGACAATTTACAGTTGCTCATACACCTCAGCAGAATGGAGTAGCAGAGCG GATGAATAGAACTTTTCTGGAGAAGACAAGAGCTATGCTGAGAACAGCGGAATTAGGCAAGTCCTTCTGGGCAGAAGCTG TCAAAACTGCCTGTTATGTGATAAATCGATCGCCATCAACTGCGATTGATTTAAAGACACCAATGGAGATGTGGAAGGGA AAACCAGGTAATTATTCTTCTCTACATGTGTTTGGATGTCCTGTGTATGTAATGTTCAACTCCCAAGAAAGAACAAAGCT GGATCCAAAATCCAGGAGATGCATATTCGTGGGATATGCTGACAATGTAAAGGGGTATCGTCTGTGGGATCCCGCTGCCC ACAAGATTATTGTCAGCAGAGATGTAATCTTTGTAGAAAATGAATTACAAAAGGAGCAGAAAAATGATGGCACTACAAAG GAGACTGCTACAGTGGAGATAGAGGAAAAGTCAGGAGGAGATGATTCTTCTGAAGCAGAGCCAGAGCACGAAGAACAAGA ACCAAATGAGGTCAATGATGAAGAACCCAGGAGAACAACACGTCAAATAAGAAAATCATCATGGCACTCAGAATATGTGA TGGCAAGTCATGATGCATATTGTCTTCTATCAGAAGATGGAGAACCATCAACCTTTCAGGAGGCGTTAAATGGTTCAGAT GCTTCGCTATGGATGGCAGCAATGCAGGAGGAGATTGAAGCCTTACATAGAAATAATACTTGGGAACTTGTTGAACTTCC TAAAGGTCGGAAAGCCATTGGCAACAAATGGGTGTTCAAAATCAAACGAGATGGCAACGATCAGGTGGAACGCTATCGTG CAAGACTGGTGGTCAAAGGATATGCTCAGAAAGAAGGTATTGATTTTAATGAAATATTCTCTCCAGTAGTGAGACTTACA ACTATCAGAGAAGTCTTGGCAATGTGTGCCGCATTTGATCTACATCTTGAGCAACTTGATGTAAAGACTGCGTTTCTTCA TGGAGAACTTGAAGAAGAAATCTATATGCTCCAACCAGAAGGCTTTAAAGATCATGAAAAAGAAAACTTGGTTTGCAGGT TGACCAAATCTCTGTACGGTCTAAAGCAGGCGCCGAGGTGTTGGTACAAGAGATTTGATTCTTTCATCATGAGCCTTGGA TACAACAGGCTGAGTTCAGACCATTGTACGTACTACAAAAGGTTTGATGATAATGATTTCATCATTTTGCTGTTGTATGT GGATGACATGTTGGTGGTAGGCCCCAACAAAGATCAAGTCCAAGAATTGAAGGCACAGTTGGCTAGGGAATTTGATATGA AAGACTTGGGACCCGCAAACAAAATTTTAGAGATGCAAATTCACCGAGACAGAAAAGGCAGGAGGATTTGGCTTTCTCAG AAGAATTATCTTCAGAAAGTCTTGCGGCGCTTCAACATGCAAGACTGTAACCAAATCTCAACCCCACTTCCTGTTAATTA CAAATTATCCTCAAGTATGATTCCTAGCAATGAAGCAGAGAGGATGGAGATGTCTCGAGTACCGTATGCATCAGCGGTGG GAAGCCTTATGTACGCTATGATTTGCACTAGGCCAGATATTGCTCAAGCAATTGGGACGGTCAGTCGGTTTATGGCAGAT CCAGGCAAAGAGCACTGGAATGCTGTGAAGAGGATTCTGAGATACATCAAAGGAACCTCAGGTGCTGCGTTATGTTTTGG GGGATCAGAATTCACTATCAGAGGCTATGTTGATTCAGACTTTGCAGGTGATCTTGATAAAAGAAAATCTACTACAGGCT ATGTGTTCACACTTGCAGGAGGAGCAGTAAGCTGGTTATCCAAATTGCAGACTGTTGTAGCTTTGTCTACTACAGAAGCA GAATACATGGCAGCTACTCAAGCATGCAAGGAAGCTATTTGGATTCAAAGGTTGTTGGAAGAGCTCGGGCACAAGCAACA GAAGATTATTGTGTATTGTGATAGTCAGAGCGCCTTGCACATTGCAAGGAATCCAGCCTTTCATTCCAGGACAAAGCACA TAGGAGTTCAATACCATTTTGTCAGAGAGGTAGTAGAAGAAGGAAGCGTGGATATGCAGAAAATTCACACCAAAGACAAC CTAGCAGATGTAATGATGAAGCCGATCAACTCTGATAAGTTTGCATGGTGTAGATCCTCCTATGGCCTATTAAAAATGTA A
Download CDS Sequence

Protein sequence (LotjaGi6g1v0037400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAAKFEIPKFNGSNFSLWKLKIKAILRKDNCLPAIDGRPADITDEKWKEMDDNAVANLHLSVADSVLSSIAEKKTAKEIW DTLIQLYEVKSLHNRIFLKRRLYTFRMSESTSMPDHINNLNTMFAQLSASDFTIGENERAEVLLQSLPDSYDQLVINITN NNIVDRLSFNDIAGAILEEESKRKNKEDRQESSKQMEALTVTRGRSTERGPSGSQNHGRSKSRRKTNLKCYNCGKRGHLK KDCWANKKSGEKSSEASTSQGCVASTSDDGEVLYSEAAVSTKGKNRLIDVWIVDSGATWHMTPRRDWFCTYEPVSEGNVF MGNDHALEIVGIGTVKIKMYDGTIRTLQEVRHVKGLAKNLLSVGQLDDLGYKYDIQGGILKVVKGSLVVMKAKKVAANLY MLLGDTWQMADASVAVGSQEETTMMWHRRLGHMSKRGLKVLAERNLIPGLKSVSLPFCEHCVISKQHRLKFAKSTARSKH ILDLIHSDVWESPEVSIGGAKYFVSFIDDYSRRLWVYPIKKKSGVYSVFKEFKAQVELETGKRIKCLRTDNGGEYTDGDF LAFCKQEGITRQFTVAHTPQQNGVAERMNRTFLEKTRAMLRTAELGKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKG KPGNYSSLHVFGCPVYVMFNSQERTKLDPKSRRCIFVGYADNVKGYRLWDPAAHKIIVSRDVIFVENELQKEQKNDGTTK ETATVEIEEKSGGDDSSEAEPEHEEQEPNEVNDEEPRRTTRQIRKSSWHSEYVMASHDAYCLLSEDGEPSTFQEALNGSD ASLWMAAMQEEIEALHRNNTWELVELPKGRKAIGNKWVFKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLT TIREVLAMCAAFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKDHEKENLVCRLTKSLYGLKQAPRCWYKRFDSFIMSLG YNRLSSDHCTYYKRFDDNDFIILLLYVDDMLVVGPNKDQVQELKAQLAREFDMKDLGPANKILEMQIHRDRKGRRIWLSQ KNYLQKVLRRFNMQDCNQISTPLPVNYKLSSSMIPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAIGTVSRFMAD PGKEHWNAVKRILRYIKGTSGAALCFGGSEFTIRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEA EYMAATQACKEAIWIQRLLEELGHKQQKIIVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTKDN LADVMMKPINSDKFAWCRSSYGLLKM
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Pfam
PF14223
47 186 140 1.2E-35 –
MobiDBLite
mobidb-lite
181 225 45 - –
MobiDBLite
mobidb-lite
195 217 23 - –
Gene3D
G3DSA:4.10.60.10
200 260 61 5.3E-6 –
SUPERFAMILY
SSF57756
212 248 37 1.43E-6
IPR036875
Pfam
PF00098
229 243 15 2.6E-5
IPR001878
SMART
SM00343
229 245 17 1.3E-4
IPR001878
ProSiteProfiles
PS50158
229 243 15 10.955
IPR001878
Pfam
PF13976
398 466 69 2.9E-16
IPR025724
PANTHER
PTHR11439:SF265
454 945 492 3.1E-164 –
PANTHER
PTHR11439
454 945 492 3.1E-164 –
Gene3D
G3DSA:3.30.420.10
472 653 182 9.3E-34
IPR036397
ProSiteProfiles
PS50994
476 642 167 24.471
IPR001584
SUPERFAMILY
SSF53098
477 636 160 5.69E-43
IPR012337
Pfam
PF00665
480 593 114 2.9E-20
IPR001584
MobiDBLite
mobidb-lite
711 737 27 - –
MobiDBLite
mobidb-lite
711 766 56 - –
MobiDBLite
mobidb-lite
750 765 16 - –
SUPERFAMILY
SSF56672
817 1260 444 2.85E-27
IPR043502
Pfam
PF07727
819 1063 245 5.4E-82
IPR013103
CDD
cd09272
1154 1292 139 5.69458E-76 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of
GO:0015074
Biological process DNA integration The process in which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0037400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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