Domain Predictions — View

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PTHR12300:SF43

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 12

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0085169.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HVA22-like protein a [Medicago truncatula] gi\|357476185\|ref\|XP_003608378.1\|	Domains CYTOPLASMIC_DOMAIN IPR004345 NON_CYTOPLASMIC_DOMAIN PTHR12300 PTHR12300:SF43 TMhelix TRANSMEMBRANE mobidb-lite	8
Lj0g3v0280139.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HVA22-like protein a [Medicago truncatula] gi\|357476187\|ref\|XP_003608379.1\|	Domains IPR004345 NON_CYTOPLASMIC_DOMAIN PTHR12300 PTHR12300:SF43 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION mobidb-lite	9
Lj0g3v0280139.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HVA22-like protein a [Medicago truncatula] gi\|357476185\|ref\|XP_003608378.1\|	Domains IPR004345 PTHR12300 PTHR12300:SF43	3
Lj4g3v0386210.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HVA22-like protein a [Medicago truncatula] gi\|357476185\|ref\|XP_003608378.1\|	Domains CYTOPLASMIC_DOMAIN IPR004345 NON_CYTOPLASMIC_DOMAIN PF03134 PF12874 PTHR12300 PTHR12300:SF43 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF57667 TMhelix TRANSMEMBRANE	14
Lj4g3v0386210.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HVA22-like protein a [Medicago truncatula] gi\|357476187\|ref\|XP_003608379.1\|	Domains CYTOPLASMIC_DOMAIN IPR004345 NON_CYTOPLASMIC_DOMAIN PF03134 PF12874 PTHR12300 PTHR12300:SF43 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF57667 TMhelix TRANSMEMBRANE	14
Lj4g3v0387230.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HVA22-like protein a [Medicago truncatula] gi\|357476185\|ref\|XP_003608378.1\|	Domains CYTOPLASMIC_DOMAIN IPR003604 IPR004345 IPR015880 NON_CYTOPLASMIC_DOMAIN PF03134 PF12874 PTHR12300 PTHR12300:SF43 SM00355 SM00451 SSF57667 TMhelix TRANSMEMBRANE	14
Lj4g3v0387230.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HVA22-like protein a [Medicago truncatula] gi\|357476187\|ref\|XP_003608379.1\|	Domains CYTOPLASMIC_DOMAIN IPR003604 IPR004345 IPR015880 NON_CYTOPLASMIC_DOMAIN PF03134 PF12874 PTHR12300 PTHR12300:SF43 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00355 SM00451 SSF57667 TMhelix TRANSMEMBRANE	18
Lj4g3v0387230.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HVA22-like protein a [Medicago truncatula] gi\|357476185\|ref\|XP_003608378.1\|	Domains CYTOPLASMIC_DOMAIN IPR003604 IPR004345 IPR015880 NON_CYTOPLASMIC_DOMAIN PF03134 PF12874 PTHR12300 PTHR12300:SF43 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00355 SM00451 SSF57667 TMhelix TRANSMEMBRANE	18
LotjaGi4g1v0040600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HVA22-like protein; TAIR: AT1G74520.1 HVA22 homologue A; Swiss-Prot: sp\|Q9S7V4\|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr\|A0A151T2F4\|A0A151T2F4_CAJCA HVA22-like protein; Found in the gene: LotjaGi4g1v0040600	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.160.60 IPR003604 IPR004345 IPR013087 IPR036236 NON_CYTOPLASMIC_DOMAIN PF03134 PF12874 PS00028 PTHR12300 PTHR12300:SF43 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00355 SM00451 SSF57667 TMhelix TRANSMEMBRANE	21
LotjaGi4g1v0040700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HVA22-like protein; TAIR: AT1G74520.1 HVA22 homologue A; Swiss-Prot: sp\|Q9S7V4\|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr\|I1KQX1\|I1KQX1_SOYBN HVA22-like protein; Found in the gene: LotjaGi4g1v0040700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.160.60 IPR003604 IPR004345 IPR013087 IPR036236 NON_CYTOPLASMIC_DOMAIN PF03134 PF12874 PTHR12300 PTHR12300:SF43 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00355 SM00451 SSF57667 TMhelix TRANSMEMBRANE	20
LotjaGi4g1v0040700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HVA22-like protein; TAIR: AT1G69700.1 HVA22 homologue C; Swiss-Prot: sp\|Q9S7V4\|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr\|A0A151T2F4\|A0A151T2F4_CAJCA HVA22-like protein; Found in the gene: LotjaGi4g1v0040700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.160.60 IPR003604 IPR004345 IPR013087 IPR036236 NON_CYTOPLASMIC_DOMAIN PF03134 PF12874 PTHR12300 PTHR12300:SF43 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00355 SM00451 SSF57667 TMhelix TRANSMEMBRANE	20
LotjaGi4g1v0040800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HVA22-like protein; TAIR: AT1G74520.1 HVA22 homologue A; Swiss-Prot: sp\|Q9S7V4\|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr\|G7JV31\|G7JV31_MEDTR TB2/DP1, HVA22 family protein; Found in the gene: LotjaGi4g1v0040800	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.160.60 IPR003604 IPR004345 IPR013087 IPR036236 NON_CYTOPLASMIC_DOMAIN PF03134 PF12874 PS00028 PTHR12300 PTHR12300:SF43 SM00355 SM00451 SSF57667 TMhelix TRANSMEMBRANE mobidb-lite	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	8.33