Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0040700 |
| Transcript ID | LotjaGi4g1v0040700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | HVA22-like protein; TAIR: AT1G74520.1 HVA22 homologue A; Swiss-Prot: sp|Q9S7V4|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr|I1KQX1|I1KQX1_SOYBN HVA22-like protein; Found in the gene: LotjaGi4g1v0040700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4800079..4811161) extracted from Lotus japonicus Gifu genome v1.2.
ATATGTTAAGGGTGAAATAGTAATAACTCATCACAAGTATGACTATGTCTGTCCCTTTCATCACCAACTTTCATTATTCT TCATGTTCTTTTAAAAGCCTTGGTTGGCAATTGCAGTAACAAGGTTGAAGCTGAATTCAATGGCTTCTCTGTGGTTTCTC AAATTAGCTCTCAATTGCATTGACCATTTCGCATGGTATGTGTGCATATATATATACTTCGTTTCCTTGCTTGTATTTCT CAATTTGATCACATCTTTTCACATACCTCTTCACATTACTTGTTGAGTGTTCTAACTTCTTGATTCTATTCTCACTGCAA GCTAATCAACTGTCTTTGTTTATCTTGTTTCCTTTTCTAGGCCACTTCTTGCTTTGGGGTATCCTATGTAAGTTAATTTC TCCCTTTATCTTTGATTGTGAAAAATTCCCATTAATTAGCTAATACCCTTGATCTCTTTTAGTGTTTTCTGCATGAATCT CCTTACCCATTTTTGTTTTTGTGATTATTGTTTGTGTGTTTATGACAGGTGTGCTTCCGTACAAGCAATTGAGACTGACT CCAATAAGGAAATGAGAGATTTGATCTCATATTGGATACTTCTCTCATTGTTATACCTATTTGAGTATGCTTTTATGAAA CTTCTCCAATGGTAAATTGTTTACCCTGTAATATTTCTTCTACAAAGATAAGAATTCTACATTTTTACTAGTTTATTTTC TTTTACTGTGGCTTCAAGCCTTCAAGAACCATTTCTATTGTCCTTTACTCAACCTAACTCCTGGAAACTTGATTTTGCAA ATAGAAAGCAATTTGAGATTTCTGATGAAATTGGTTAATCTTGAATTGTAACTTATGCTGCATTTGTCAAAGCACAAATT GGTCTTCATTCATGGAACTGTAACTAAGATGAATGTTATTGCTTTTACATATCTGCTGCAAATATTCAATTTTTGTTCCT AAAAAATTGAAAAAAAAATTCAATCGCTGAATACTGGATTACTGGTTAACTAGCCTATTTTTATATTGTGCTACCAGTCC AAAACCATTTCATACTGTACTTACAAAATTAGAAGATTGATTTGAAGAGTTTGAGTTGGTGTTAACAGTGAACACTTCTG TGACTGCAGATTAACAGTATTTTCATTTTTTGAAGTCTGTATTTTTATATCTGATTTTATTAAATAAAGTCTTTTGTAGC ATAACAAATGATTTCTATTTTCATTTCTTCGTTAATTTGGTGTTTATTAGGTTCGAGTTCTGGCCTTACATGAAGCTTAT GATCATCTTCTGGCTCATCATTCCAGACTTCGGACGAGCTTCGTATGTCTATAGTAACCTTATTCGCGCATACATCTTCA CAAAACCACAAACAGCCATATGCAGGTTAAATAAATGGAGGAAGTTTTTTGTCAAGAAAGAAAACTTTTCACTGCTAGCA GAGAAATATGTGAAAAAGAATGGAACTGAAGCATTTGAGAAACTCATAACTAGCAAGGTATACAGCTATGTCGCAGTATA GTGTATAAATTGGTTAGAGCACAATCCCAACAAACTCAACAATTTAATTTAGGGAGCAAGTTTGTTGGTTTCTGTTCTGG GAATGAACATTGAGGGAAGGTATAGTACCTAAGGGTGGAGAGATTGTGCTAGAGAGAGAGTAAGAGAGAGAATGCTGAAT TTCATGTGTTATTTTATCAAATGAGCCAAAAGTCCCTTACAATTGATAACTACCTCCTATTTATAGAGCTTGGGTACTAC CTATTGGGCCAATTGGGCCTCCAAGATCAAGGCCCATCTGAAGTCCAGGGCCCCGCCTCAGGGCGGGATACATGCTGGGC GTTGCCCCTCTAGGGGCTCGCCCAGTCCACTAGTCCACAAGACACCGAGCTCGAGGTACGAGAGCTAAGGGTGTCTTTTA AATGCTGTTACACGTCTTATCGTACACCGGAATCTACACTGCCAACATGGCTTGAGAAAAGAGAAGTTAACTATATCGCC AACATGGCGTGAGCAAAAGGAAACTAGCATTTTCAGTTACCCAGTCCACTGACTTGACGAGCAAACCGAGCTGGCAAGTC CACAAGTCCGCAAGCGGCGAGAACGACTACTTTGTATTGGTGATAAGTTGGAGCAGGTGTATGATCGCTCGCCGGCGGGA AAGGTGGCAGGCATGGGTCATGTGCCGATCATTCAATCATTGACTGGCGGTGACCCCGGCGAGCGACTGAACTTCGTTGT TGGTGTCAATCGTCAGGCGATGGCGTTTGATCCTTATAGTGGCGAGGCTTTCCGCGCTTTCCCTTATTTTAAAACCCTTT CAAATTTCAATCTGCCTCACGTGGCTGCCCCACGTGATGTGTTGGTTACATCAATTTCCCTCTTTCTCCGGAACCGTCAC TTCACATTTCCTAACCGTCCCATCGTGCGCAGTAACTCCCCTTTGCACGCGACCCACCTCCCCAAAACCATCATGACTTC CAACCTTCCACACGCGTCCAACACGCGTCACCCTTCCAGCTTCTCCCCTTCTCCTATAAAAACCCTTCTTCCCCACTGTC ATCCCTTTCCGAGACCCCTCTCACTTCCCTAATCGCTTACCAAACTCCTTCTGCCCACTTCCGCTCCGGAGCCGTCGCTT ATCACCCTTTCCGCTACCCACTCTTCACATCCTACTCCGGTGAGTCCCCCTGTCCTTATCTTTACATCGCACACATACTG ATCTTTTCCTTTCTTTCACTTCACTGTCTTCTAAAAATGGCTTCAAACCCTACCTCCCCTAATCGCTCTTCTTCCTCCTC CGAAAGCGACCCTGACTCCACCGCTGCCGGCGGCCTCCGTTTAGAGGTTCCGGAGATCCCAGCTCACCGACTAAAAACCT ACGCCACTCTGCCCCTTCCAGTCCAAGTAGCCCCTAAACACGAGGCTATAGATCAACCTTCCATCTTCCAAGACAGCGAT CCCATTGTGCAATTCGTGAACTCCCTGGGTGGCTTGTCCAATGACGATGAGTTTAACGCCAAACTCAGGATCTGGGTTTG CAGTCCCGGGGATCGCCCCTGGCTTCACAAGCCAGACGGCGACGTAAAGAGATCCCATTTCTTCTTTGCGTACGAATACA TGTTTAGCGAGCTTGGAATCAGGCTTCCTTTCTCGCCCTTTGTCCAAACCGTCCTCCGCGACATCAACGCGGCTCCCTGT CAACTCCACCCTAACGCCTGGGCTTTCATTCGATGTTTTGAAATCCTAAGCGCCGCCGTCGGCATCGCCCCATCCCCCAC CAGTTTCTTCTACCTTTACGACGTCGACCCCAAGTCCATCAAAAACAAAGGATGGATTTCCTTGAAGGCCCGAGCCGGCC GGAAGTGTTTGCATCCTCACAAAAGTAACGCGAAGTCCTCCTTCGCACGAAAGTACTTCCGTGTGGCGGTTCATCCCGCC TACCCAGAGGCATTCACCCTCAGAGACGGGACCGCCCTCTTTCCTCTTTATTGGACGGAGAAGCCCAACGGGATCACCGA TCCTCCAGAGGAATCCTTGTCCGCCAACGATAAAGCCTTTCTTAATCTCCTTGCCCCACTTCCCATCCTTGACTGCACAA CAGTCCTTGAGGGCGCTGACCTCTCAAGAACTCCCAAATACTTAGGTTGCCCATAGCTCACTTTTATTATTGACATTTCC TTTCTCGTCTCCTATGTTGTCACTGATCGTATTTTTTATTGTTACAGAAGATATGAATTTCACGAACGCCGAGCTCCTGA AGGCCCGCGAGAGGAGAATGGCTCGCTTTTCCCCAAAATTCAACACTGAGGGCGACGCGAAAAAACGGGGCGGTGCTGAG AACCAAGCCGAGAGCACCAAAGCTCCCAAGAGGAGAAGATTGGTCAAAGCCTCCTCCGGCGCCGGCACATCCAACCCTGG CGCTCAGCCCACCACTGCTGCTGCGCCTAAAGGCAAAAATGTCGCTGAAGCCTCCGTCGCCGCAGCTACCGAGCCAACCG CCGTACCAGCTTCTACTCCTGCCTCCGCCGGTGCGACAGCTGCTGTTGCCGCTGAGTCCTCTGTTGGCGCCACAGCCGCC TCCGCCGGCGTTAACGCCACAAAAGCTGCTGCGTCTTCCGACACTCCTATTGGAGAGAAGGAAAAAGAAAATGAAACCCC AAAGTCTCCCCCTCGCCAAGAGGCGCCTCCTAGCCCGCCCCCAACACGTGATGCGGGCTCCATGCCTTCCCCGCCTCATC AAGGGGAAAAATCCTGTCCTGGCGCTGCCACTACCTCTGAAGCGGCTCAAATTGAACAAGCCCCTGCTCCCGAGGTCGGT TCTTCAAGCTATTATAATATACTCCCCAACGCCATTGAACCCTCAGAATTCTTACTTGCTGGTCTCAACCGTGACGTCAT AGAAAAAGAAGTTTTGAGTCGGGGCCTGAATGATACCAAGGAGGAGACTCTTGCTTGCCTCCTACGCGCTGGGTGCATCT TTGCTCACACGTTTGAGAAGTTCAATGCCGCCAACGCTGAAGCTGAGCGGTTGAAGGCCGAAAGTGCTAAGCATCAAGAA GCCGCCGCTGCTTGGGAAAAGCGTTTCGACAAACTAGCGACGCAGGCAGGAAAAGACAAAGTCTATGCCGACAAGATGAT TGGCACGGCGGGGATTAAAATCGGCGAGCTGGAGGATCAGCTGGCGCTGATGAAGGAAGAAGCAGATGAGCTTGATGCAA GCCTTCAAGCTTGCAAGAAGGAGAAAGAGCAAGCTGAGAAGGACTTGATCGCCCGAGGCGAGGCACTGATTGCTAAGGAG TCAGAGTTTGCCGCTCTGTGCGCTGAGCTGGAGTTAGTGAAAAAAGCGTTGGCGGAGCAAGAGAAAAAGTCTGCGGAGTC CTTGGCCTTGGCGAAATCTGACATGGAGGCGGTGATGCAGGCTACGTCCGAGGAGATCAAGAAAGCGACCGAAACCCACG CCGAGGCCCTCGCCACGAAAGATGCTGAGATTGCTTCCCAACTAGCAAAGATCAAAAGTCTAGAGGACGAGCTGGCGACG GAGAAGGCCAAAGCCATTGAGGCGAGGGAACAAGCCGCTGACATCGCCCTTGACAACCGCGAGCGCGGTTTCTACCTCGC CAAAGATCAGGCCCAACATTTGTACCCGAACTTTGACTTTAGCGCCATGGGAGTAATGAAAGAAATAACCGCCGCAGGAC TGGTTGGTCCCGACGATCCTCCCCTGATTGACCAAAACCTCTGGACAGCGACTGAAGAAGAAGAGGAAGAAGAAGAACAG GAGAAAGAAAACAATGAATAATGTAATTTTAACATTACTTTAGCTTTTACTGTCACCTTGTAGTGTACTTTTCCGCCATT CGTCTATGTTTAAGCAACCCTTCGCCATAGCTTTTTATATCGCCGTTGGATATTTTGTAAATCATGTTGGAATGCTTCCG TCATACATTTTTTAGTCGCCGCCGCATCGTCATCACCATCTTGCTTTAGCTTTATAAGAAATTAGTTTGACTTGCTCGCC ACTATTTTGCGGTAGGTCGCTACCCTCATTTTTGGCGGTAGGTCGCAACCCTCTTGCGGTAGGTCGCGACCCTCTTGCGG TAGGTCGCCACCATTTTGCGGTAGGTCGCTACCCTCATTTTTGGCGGTAGGTCGCGACCCTTTAGCGGTAGGTCGCCATC CTCTTGCGGTTGGTCGCGACCCTCTTGCGGTAGGTCGCCACCCTTAGCGCGAGGTCACCACCCTTTTGGCGACTTTTGTG TGTCTAAACTGAGTCTTACAGGTCGCCACCCATAGCGTTTGGTCGCCACCCTTTGGCATGAGGTCACCACCCTAGCGGTA GGTCGCCACCCTTGGTGTGATCGTCCCTTTTCGGGACTCAAAGTGCTTTGGGTTCCAATGGCCAGTTGGATTACCAAAGC GGTGCTCAGTAGAATGGGCAATTTGTACCCCACACATCGCCAATGAATCCGGTTGTTACGTGGGCTTTTCCGGGGCTAAC TTAGTTCATCGTGAAACTTGTTTCACTTTGTAACTAAATCGCGCCATCAGGAGCTTGTCCCACCCAATAACAAACCGCTT ATGGAAGAGTCTTCCAAGTTTCACAAAACTTTAATGGTGTGCCTCAATTCACCCACTCTTTCTCTTTGATCCGATTTGCT CCTCTCTGTCTGAATCAAACCAGTGAAGACAATATAACTTCTAATACCAACTTCAAAATAAGAAAATTAGGAAATACAAC AACTGAGAAGGGAATCAAATGAAAGATGAAGGAAAAGTTTGAAGGAATTGGAAAAATTTGTTGGCCAGCGATCTTAACCA TAGCTACGCTTTACTCGCCAAACTTCCATGGCCAAAACAAAACGTGCCCACCAGGCGCCGGAGTAAAACGCGCTTACTAG ATTCCAACGCCAACGACATTCTCTCGCCGTCGAACTCCATCGCCAAAGCAAACGTGCTCGCCAGAATTTGCTCACCGCCT AATCGAGATTTTCATCCGAAGCTTCGATTTCATAACATCTATGACCAACCAACGCACTCTTCTTGCCGTACAAGTTAAGG CAATTATTGTAACACTCCCTCGCCATCCTCTGGTCCACCTTCAGCTTTCCCACCTTTCCACTGCTTAGCGGATACTTGAC CGCTAAGTGGGCTGTCGAAATTACAGCACAAAGGCGATTCAATGTATTTCGCCCAATGATGACATTGTAGGATGCTACCA CCTGGAGAACCAGATACCTTACCTTCAAAACCCTAGCACACTCGTCTTCCCCAAATATTGTGTCTAGATCAATGTATCCC CGCACCATTACTTGCTCCCCCGCGAAACCTACCAAGGTTCCCGCGTATGGAGTTAGACCATTGTTAGTTAGTCCCAACTT GTCAAATGCATCACCATAGATAATATCAGCCGAACTACCCTGATCCAGGAGTACCCTTCTAACGTTAAAACTGTTCATCC TTAACTGCACCACAATCGGGTCGTCCTTATGAGGCTTTATCCCCTCAAAGTCCGCCATCGAGATTGTTATGTCAGGGTGT TCGAATCCAAAAGCGACCTCATGAACGGAATTAACGGCACGAACATGGCGCTTACGCGCTGCACGAGTGTCGCCACCGCC GCCAAATCCCCCGGCGATGGTGTTGATGGTCCCGACGGGCGGTCCTGAGTGTTGAGCGAACGTGTCATCAGCCCCTTTTG TGGCGATAGCCGCTGATTCTTGCTTTTTCTTGCCCTTAGCGTCCGCTCGCTCCTCCTCCCGCTTGTGCGCTTTGTTTTGA TCGCCACCATTGCGCCACTGGCCTTGACGATTTCCTTGATATCCCGCCCGAATCAACTTATCAATCTCCCGCTGCAAAGT CCAACAGTCATCCATATCATGCCCGGCGGATCGGTGGAACTCGCACCACTTCTTGGGATTGGCGTCCCGTGGCTGATACT TTGGGGCCTCCGGCTCATCCACTAGATTTGCGTCGCTTGCCCCTCGGAGCATATCCGATACATCTGTGTTCATCACCATA TCAGTTTCCTCCTGCTGGCGATGAGACCTAGATTGCCAAGGCCGACGTTGTTCATAATCATCGCGCCGTGGATACAACTG TTCCTTCGTCGGTTTGAATACCGACTTCCCCTCACCTGGCCTCTGCTGTTTGCCGTCCCCCTTATCCTCGCCGCTCCTAT CTTTTTTCACGCGCTTGGGCGACGTGTCGCCCTTTTCCAACTTCGCGCGCTTTCTTTTGAAAGCGTCGTCCTCCTCGTCC AGAATATAAGTGCTGGCACGAGCACGCATCTCTCCCATCGAGCGCGCCGGCTTACGTGTCAATTTGCTGTTCAACCCTCC CGGCAGCAAACCGTTTTTAAATGCTAAAGCACAAGCTCGAGGCTCCTCGTCCTCTACCTTCACCGACGCCGCGCTATACC TTGCCATGTACTCTTTCAGTGACTCCCCTTCCTGCTGGCGAATATTGTATAGGTCATTGATCGTCACCGGCTGATTCTTA TTTGCCGAGAATTGCACTAGAAACTTGGATGAGAAGTCTCTGAAATTTGAAATCGATCCACGCGGCAAAGTTGTGAACCA CGCCATCGCCGTCGATTTGAACGTCGATGGAAACATCCTGCACTTCACCGCATCTGACGCCGCAATTATCACCATCTTCG TATTAAAATACAGAAGATGATCTTTCGGATCGGAATCTCCGCTGTAAGAATCCAGAACTAACGTTTTCATGTTATCCGGG ATCGCCACATTCTCAACATCTTCCGAGAACGGACGGAACTCAGCCACGGAATCTGCTTCTCTGCTTCCGTCATCTCGCTG CTCGCGATGGTAGAAATCTAACTGAGCCTGTAGATGCTCATTCCGCTGCTGGATGTTTCCAATACTGCGCATCAAATGGC GCCATTGCTCCTGTGTCACCGCCGGCTGTTGTTCCGGAGCAGGTGAATTCTCTGGTGAGCGCTCCAGAGATCCTACCTGT GAAGGCGATGGAGGAGGTGGTGGTGATGGAAGAGGAGAAGGCGACTGTACTCCTGTCGTTCGTACCGGAGAATCCAGGTC CACCCGATGAGGCCGTCGAGGCGGCGAAATCCGCTGCCGCATTGGTGAATGATGCTGCCTCCTGCGTCGAGTCTCCATCC AAACCAGAAACGATGCAAACTCGATCGGAGAACCAACACTAGTCACAGAGTCAAAATCGGAAAACCAGAGAATTGCCTAA TCACAATCAGAGGTAACTTCATGCACAATCAATCCACGTGAATGGGAGTAGAAAGTTTACAGTCCCCACAGACGGCGCCA AAATGTTCTGGGAATGAACATTGAGGGAAGGTATAGTACCTAAGGGTGGAGAGATTGTGCTAGAGAGAGAGTAAGAGAGA GAATGCTGAATTTCATGTGTTATTTTATCAAATGAGCCAAAAGTCCCTTACAATTGATAACTACCTCCTATTTATAGAGC TTGGGTACTACCTATTGGGCCAATTGGGCCTCCAAGATCAAGGCCCATCTGAAGTCCAGGGCCCCGCCTCAGGGCGGGAT ACATGCTGGGCGTTGCCCCTCTAGGGGCTCGCCCAGTCCACTTTCTATAAGAAAGTGTATGGAATTGGCTATTGAAAATT GAAGCTAACTTTCTTTTGTTTTTTTTCCTATCAAAGGACACAATAGATAATCCTGATGTAGAAGCAACGAATGCAATTAG AGCTACTTGTAAAGAAATGAAACAGGTAAATATATTATTATGATAAAGCTAATTCTCAGAGATTACAGTAGTCTCTTTAT ATAGAGCCTATAAGAAGCTTCTCTAGAAAGCTTATCTAATACAGCTGTGTAATTAGACTAACTGTCAACTATAACTAACT ATAACAGAGACTAAACTATATGTAAACATATTATCTCTAATAAGATCTACTTAAGTTTTCTTATGACATTTAGAGTACTT ATTGAAAGAGCAAATTGTGCAGACAAATGGAAAAATGCTCCAAACAGAGCACAAAGACATCAAAGATTTGGAGGTCATCG AGAAAAAAGAAATTCCGGCAGGCAAGCAAGTAAGGTTTCCAGGACAAATTTGAGTAATACTTTTAAGCTTTTACTTAATA CATAGAGATTTTGTGGATATTGTCACGGTGCATCGTCGTTGACAATCATATCTGTTGTGATCTTGTTAGTGGAGAGACAT AATTTGAGTAATAATTTTTACTTAAGGCATCAATGTATTTGACACCTCTTTCTTAAAGAAGGGGTTTTAAGTTTGAACTA TCCTCTCCCTTATATGCATGTGTTGCCATATGGAATTTTTTCAAGAATTTGTAATCTTTAAATCATATTGGGTCAGCTTG TAATAAGTTCTTAACCTATATACTAACTCTTGAGTATTGCAGGATATTCCTTCCACACCTAACCTTGCTCCAAGTCAGAA TGCTTCATCAACCATGGTGGAATCTAAAGGAATAGCAGTGAAAGTTAAAGCTGGTGAAGAGTTTCCTCAGAGTTCTATAC ATAAGGAAGTGCAGAAAGAGTGGACTTGCGCTTTATGTCAGGTATCAGCTTCGAGCAAGAAAAACTTGAATTCCCACCTA CATGGGAAGAAACACAGGGCTGCTCATGAAGCTCTAAAAGCAAAAACTCAACCTGTTCCTCAGAAGCTGAAAATTGATCT TCCCAAAGAAGAAAGGATACTGAAGAACATCATTACCAAACCTGTTCCTCAGAAGCTGAAAATTGATCTTCCCAAAGAGG AGCGGAAACAGAAGAACATCATTACCAAACCTGTTCCTCAGAAGCTGAAAATTGATCTTCCCAAAGAGGAACAGAAACAG AAGAACATCATTACCAAACCTGTTCCTCAGAAGCTGAAAATTGATCTTCCCAAAGAGGAACAGAAACAGAAGAACATCAT TACCAAACCTGTTCCTCAGAAGCTGAAAATTGATCTTCCCAAAGAGGAACAGAAACAGAAGAACATCATTACCAAACCTG TTGCTCAGAAGCTGAAAATTGATCTGCCCAAAGAGGAACGGAAACAGAAGAACATCATTACCAATCAGCTAAGTAACAAG ACCAATAAGGGAGAGAGTATTGTTAACATTAGTTTGAAGGGAAATGCAGTCATGGATCATAATAAGGGGCAAGAAATGCA AAAGATCCTGTCTGAATATGTTAGAGTGAAGTATTCCAATTTAAGGTGTGAATTTTGTAATGTCCGTTGCACTAGTGAGG GTGACATGGCCTCTCACTTAAATGGGAGGAAGCACTTGGCAAATATTATGGGGGTAGATGAGTTTAGAGGTAGTTGAGTT TTCACTAATGGTACAAATGCTGGAGTAGTTTAATTGACAATAGGGAGATTGTTTGAAAGTTGAAAGGAATTTGGGGAACA GAACCTGTATCGTCTAGTATTTATTCTGGTTGTTGTTCCACCTTGTTTCAGAGGATTCATAAGTATATCCTTCTTTATGA CATCTTTTTTTAACTTCTAAGTCACTACATAGCAGGTTCTTTTGCTGGGACAGTTAATATTTTGAACACCTCATTCCCAT ATCTATACTTACAATTATGATTCTATCTACTGTTTGTTCAACA
CDS sequence (LotjaGi4g1v0040700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTCTGTGGTTTCTCAAATTAGCTCTCAATTGCATTGACCATTTCGCATGGCCACTTCTTGCTTTGGGGTATCC TATGTGTGCTTCCGTACAAGCAATTGAGACTGACTCCAATAAGGAAATGAGAGATTTGATCTCATATTGGATACTTCTCT CATTGTTATACCTATTTGAGTATGCTTTTATGAAACTTCTCCAATGGTTCGAGTTCTGGCCTTACATGAAGCTTATGATC ATCTTCTGGCTCATCATTCCAGACTTCGGACGAGCTTCGTATGTCTATAGTAACCTTATTCGCGCATACATCTTCACAAA ACCACAAACAGCCATATGCAGGTTAAATAAATGGAGGAAGTTTTTTGTCAAGAAAGAAAACTTTTCACTGCTAGCAGAGA AATATGTGAAAAAGAATGGAACTGAAGCATTTGAGAAACTCATAACTAGCAAGACAAATGGAAAAATGCTCCAAACAGAG CACAAAGACATCAAAGATTTGGAGGTCATCGAGAAAAAAGAAATTCCGGCAGGCAAGCAAGATATTCCTTCCACACCTAA CCTTGCTCCAAGTCAGAATGCTTCATCAACCATGGTGGAATCTAAAGGAATAGCAGTGAAAGTTAAAGCTGGTGAAGAGT TTCCTCAGAGTTCTATACATAAGGAAGTGCAGAAAGAGTGGACTTGCGCTTTATGTCAGGTATCAGCTTCGAGCAAGAAA AACTTGAATTCCCACCTACATGGGAAGAAACACAGGGCTGCTCATGAAGCTCTAAAAGCAAAAACTCAACCTGTTCCTCA GAAGCTGAAAATTGATCTTCCCAAAGAAGAAAGGATACTGAAGAACATCATTACCAAACCTGTTCCTCAGAAGCTGAAAA TTGATCTTCCCAAAGAGGAGCGGAAACAGAAGAACATCATTACCAAACCTGTTCCTCAGAAGCTGAAAATTGATCTTCCC AAAGAGGAACAGAAACAGAAGAACATCATTACCAAACCTGTTCCTCAGAAGCTGAAAATTGATCTTCCCAAAGAGGAACA GAAACAGAAGAACATCATTACCAAACCTGTTCCTCAGAAGCTGAAAATTGATCTTCCCAAAGAGGAACAGAAACAGAAGA ACATCATTACCAAACCTGTTGCTCAGAAGCTGAAAATTGATCTGCCCAAAGAGGAACGGAAACAGAAGAACATCATTACC AATCAGCTAAGTAACAAGACCAATAAGGGAGAGAGTATTGTTAACATTAGTTTGAAGGGAAATGCAGTCATGGATCATAA TAAGGGGCAAGAAATGCAAAAGATCCTGTCTGAATATGTTAGAGTGAAGTATTCCAATTTAAGGTGTGAATTTTGTAATG TCCGTTGCACTAGTGAGGGTGACATGGCCTCTCACTTAAATGGGAGGAAGCACTTGGCAAATATTATGGGGGTAGATGAG TTTAGAGGTAGTTGA
Protein sequence (LotjaGi4g1v0040700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLWFLKLALNCIDHFAWPLLALGYPMCASVQAIETDSNKEMRDLISYWILLSLLYLFEYAFMKLLQWFEFWPYMKLMI IFWLIIPDFGRASYVYSNLIRAYIFTKPQTAICRLNKWRKFFVKKENFSLLAEKYVKKNGTEAFEKLITSKTNGKMLQTE HKDIKDLEVIEKKEIPAGKQDIPSTPNLAPSQNASSTMVESKGIAVKVKAGEEFPQSSIHKEVQKEWTCALCQVSASSKK NLNSHLHGKKHRAAHEALKAKTQPVPQKLKIDLPKEERILKNIITKPVPQKLKIDLPKEERKQKNIITKPVPQKLKIDLP KEEQKQKNIITKPVPQKLKIDLPKEEQKQKNIITKPVPQKLKIDLPKEEQKQKNIITKPVAQKLKIDLPKEERKQKNIIT NQLSNKTNKGESIVNISLKGNAVMDHNKGQEMQKILSEYVRVKYSNLRCEFCNVRCTSEGDMASHLNGRKHLANIMGVDE FRGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| PANTHER | 3 | 476 | 474 | 1.7E-120 | – | |
| PANTHER | 3 | 476 | 474 | 1.7E-120 | ||
| Phobius | 4 | 11 | 8 | - | – | |
| TMHMM | 4 | 26 | 23 | - | – | |
| Phobius | 12 | 23 | 12 | - | – | |
| Phobius | 24 | 46 | 23 | - | – | |
| Pfam | 27 | 103 | 77 | 3.8E-18 | ||
| TMHMM | 46 | 63 | 18 | - | – | |
| Phobius | 47 | 63 | 17 | - | – | |
| Phobius | 64 | 74 | 11 | - | – | |
| Phobius | 75 | 96 | 22 | - | – | |
| TMHMM | 78 | 100 | 23 | - | – | |
| Phobius | 97 | 484 | 388 | - | – | |
| SUPERFAMILY | 213 | 262 | 50 | 6.88E-9 | ||
| Gene3D | 216 | 263 | 48 | 7.1E-8 | – | |
| SMART | 224 | 258 | 35 | 0.061 | ||
| SMART | 227 | 251 | 25 | 2.1 | ||
| Pfam | 227 | 251 | 25 | 7.6E-7 | – | |
| SUPERFAMILY | 436 | 475 | 40 | 2.12E-8 | ||
| Gene3D | 437 | 478 | 42 | 1.2E-8 | – | |
| SMART | 444 | 478 | 35 | 0.062 | ||
| SMART | 447 | 471 | 25 | 0.13 | ||
| Pfam | 448 | 471 | 24 | 3.1E-9 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi4g1v0040700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…