Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PTHR18034

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 13

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v1380780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: nucleolar MIF4G domain-containing protein 1-like [Glycine max] gi\|356570325\|ref\|XP_003553340.1\|	Domains IPR003891 PF02847 PS51366 PTHR18034 PTHR18034:SF4 SM00544	6
Lj1g3v3975790.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: nucleolar MIF4G domain-containing protein 1-like [Glycine max] gi\|356570325\|ref\|XP_003553340.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.180 IPR003890 IPR003891 IPR016021 IPR016024 NON_CYTOPLASMIC_DOMAIN PF02847 PF02854 PS51366 PTHR18034 PTHR18034:SF4 SM00543 SSF48371 TMhelix TRANSMEMBRANE	16
Lj2g3v1337470.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cicer arietinum] gi\|502165076\|ref\|XP_004513404.1\|	Domains G3DSA:1.25.40.180 IPR003890 IPR016021 IPR016024 PF02854 PTHR18034 PTHR18034:SF3 SSF48371 mobidb-lite	9
Lj2g3v2351520.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	MIF4G domain-containing protein / MA3 domain-containing protein isoform 6 [Theobroma cacao] gi\|508704460\|gb\|EOX96356.1\|	Domains IPR003891 PF02847 PS51366 PTHR18034 PTHR18034:SF3 SM00544 mobidb-lite	7
Lj6g3v0927360.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max] gi\|356524175\|ref\|XP_003530707.1\|	Domains PTHR18034 PTHR18034:SF3	3
Lj6g3v0938260.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cicer arietinum] gi\|502165076\|ref\|XP_004513404.1\|	Domains Coil G3DSA:1.25.40.180 IPR003890 IPR003891 IPR016021 IPR016024 PF02847 PS51366 PTHR18034 PTHR18034:SF3 SM00543 SM00544 SSF48371 mobidb-lite	14
LotjaGi1g1v0114500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pre-mRNA-splicing factor cwc22, putative; TAIR: AT1G80930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp\|Q9HCG8\|CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog; TrEMBL-Plants: tr\|V4UB47\|V4UB47_9ROSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0114500	Domains G3DSA:1.25.40.180 IPR003891 IPR016021 IPR016024 PF02847 PS51366 PTHR18034 PTHR18034:SF5 SM00544 SSF48371 mobidb-lite	11
LotjaGi1g1v0327400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleolar MIF4G domain-containing protein 1; TAIR: AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp\|Q5C9Z4\|NOM1_HUMAN Nucleolar MIF4G domain-containing protein 1; TrEMBL-Plants: tr\|A0A0B2RQV2\|A0A0B2RQV2_GLYSO Nucleolar MIF4G domain-containing protein 1; Found in the gene: LotjaGi1g1v0327400	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.180 IPR003890 IPR003891 IPR016021 IPR016024 NON_CYTOPLASMIC_DOMAIN PF02847 PF02854 PS51366 PTHR18034 PTHR18034:SF4 SM00543 SM00544 SSF48371 TRANSMEMBRANE mobidb-lite	17
LotjaGi1g1v0327400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleolar MIF4G domain-containing protein 1; TAIR: AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp\|Q5C9Z4\|NOM1_HUMAN Nucleolar MIF4G domain-containing protein 1; TrEMBL-Plants: tr\|A0A0B2RQV2\|A0A0B2RQV2_GLYSO Nucleolar MIF4G domain-containing protein 1; Found in the gene: LotjaGi1g1v0327400	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.180 IPR003890 IPR003891 IPR016021 IPR016024 NON_CYTOPLASMIC_DOMAIN PF02847 PF02854 PS51366 PTHR18034 PTHR18034:SF4 SM00543 SM00544 SSF48371 TRANSMEMBRANE mobidb-lite	17
LotjaGi1g1v0646000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleolar MIF4G domain-containing protein 1; TAIR: AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp\|Q5C9Z4\|NOM1_HUMAN Nucleolar MIF4G domain-containing protein 1; TrEMBL-Plants: tr\|A0A1J7HJK2\|A0A1J7HJK2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0646000_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.180 IPR003890 IPR003891 IPR016021 IPR016024 NON_CYTOPLASMIC_DOMAIN PF02847 PF02854 PS51366 PTHR18034 PTHR18034:SF4 SM00543 SSF48371 TMhelix TRANSMEMBRANE	16
LotjaGi1g1v0646000_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleolar MIF4G domain-containing protein 1; TAIR: AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp\|Q5C9Z4\|NOM1_HUMAN Nucleolar MIF4G domain-containing protein 1; TrEMBL-Plants: tr\|A0A1J7HJK2\|A0A1J7HJK2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0646000_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.180 IPR003890 IPR003891 IPR016021 IPR016024 NON_CYTOPLASMIC_DOMAIN PF02847 PF02854 PS51366 PTHR18034 PTHR18034:SF4 SM00543 SSF48371 TMhelix TRANSMEMBRANE	16
LotjaGi6g1v0173400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pre-mRNA-splicing factor CWC22 like; TAIR: AT1G80930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp\|Q08C72\|CWC22_DANRE Pre-mRNA-splicing factor CWC22 homolog; TrEMBL-Plants: tr\|A0A0L9VAV7\|A0A0L9VAV7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0173400_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR18034 PTHR18034:SF7 TMhelix TRANSMEMBRANE	7
LotjaGi6g1v0182000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pre-mRNA-splicing factor CWC22; TAIR: AT1G80930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp\|Q9VJ87\|CWC22_DROME Pre-mRNA-splicing factor CWC22 homolog; TrEMBL-Plants: tr\|A0A0L9VAV7\|A0A0L9VAV7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0182000	Domains Coil G3DSA:1.25.40.180 IPR003890 IPR003891 IPR016021 IPR016024 PF02847 PS51366 PTHR18034 PTHR18034:SF5 SM00543 SM00544 SSF48371 mobidb-lite	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	7.69