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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0327400 |
Transcript ID | LotjaGi1g1v0327400.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Nucleolar MIF4G domain-containing protein 1; TAIR: AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp|Q5C9Z4|NOM1_HUMAN Nucleolar MIF4G domain-containing protein 1; TrEMBL-Plants: tr|A0A0B2RQV2|A0A0B2RQV2_GLYSO Nucleolar MIF4G domain-containing protein 1; Found in the gene: LotjaGi1g1v0327400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:78169925..78179809) extracted from Lotus japonicus Gifu genome v1.2.
ATTAAGGAAAATTTCGTAATTTCACCATATCCCAATTGGTGACAGAAGCAGAAACATTAGACCAATATTTCTCCCTTGCT TTACCCTGTGTTGCCACCGCCGTTGCTGGCAGAAGAAGGAGCCCTAACTCTCTTCCTCTCCGGCGCCACCGTCTCGCATA CCCACCGCCACTAAACCGCCAAGGCACGCACGTCGCTTCTCTTCGTTGCTTCTTCTTCAATTGTTCTGCGAATATGTTGT TATGCCTACTTGTTTATTCCTGAATTTTTTATTCTCGTGATTTTCAGCTTTAGATTCCTGTTCCAGCTGTGAACCTTGCA TTGGAAACATGGGTAACCCTCATTCTTAACAAAAAATCCGAAAAATCTTTTATTTTTAACTTTTGCATTGAATCTTAAGT GACTTCAAATTTTTGTTTCTCCTGTTTTCAGAGGAACAAGCTGCTGGGAAATCACGCCGAGAGCGAAGGAAAGAATCCCG ATTGGCCAAAAATGCATCAAAGCACCAATCTTGGCTCAACCACCAGGTAATCTTAGGTTCCGTTTGGGAAAACAGCTTAA TTAAGCGCATAAGCGCTTATGAATAAGCGCTTATTCATAAGCTATTTTAAAATAATTATTAGATTAAATTGAAAATAAGC TATATATAAGCAGAAGCTCGTTTTCATAAGCTATCCTGAGTAGCTTATGAAAATAAGCTCAAAACAAGTTGTTTGCATAA GCTCTCCCAAACATTTGCATAAGCGCGTAGTGCATGTTTTTTTAGCTTTGTTCTCTCACCAAAGCAATGACAGAAAAAAA TTGTTTTTTTTTTTGTTTTATAGAAATCTAGAGCTGCTATTAAAGGAGGGAGTAATGATTCGGAGTTGAAAACTAAAAGT GAATTAGACCAGTCAGTTAGTCCAAATACCCATGAAAAACAAGTTGTGAAGTTGGAATCTTTTTCTGGGAAACATGAGGC TGCTAAAGAATACAATGTGCCAGAGGAAATTCGTGGCTCTGTACCGAAGAAAATGAGCAAGGATGCTCAAAGAAGTTTAA GGAAGAAGAGGGCTAAGATGAGTGTGATGGATTTTTCCGTAGAGGACAATAAGGATATAGAATTGGAAAGAAAACTTTCC AAGAAGCTCAAGGTGAAGGAAGGAAAATTGAGCGGGATGGATGATGGGCTGAATGTGTTACTTGAAGGAATGTCATCGTT TGCCGATTTAATGGGAGAAGGGGAGGATTCCGATACCGATGAATTTCCTGTGAAGCGGTTGAAGAAGAAGAGCTCGTCGA GTAAGAAGCATAAGTTGTCAAAGGGAAAGATTGAAGAACAAGTATTAGATGGTGCGTCGGGGCCTTTAGAAACTTATAAT CAAGATGTAGCATCAGAAGTTCCTGACAGTGTACCTTCGAGGAAGAACCATAAGAAAAGAAAATCTCCAGATCAACAGCT GGAAGATGACGCGGAGCATGATGCCGGTGACATGTCCAAGCCTCCAGAATCCTGTGGGACAGAGGTCACATCACAGGTTG CTCCTGCTGAAGTTCTGGTGAAGAAAGCAAAAGAAAAATATATAGCACCTCACTTGAGAGCTCGCGCTGGCAATGAACCT GAAGAGCATACTCAAATTCGAAGACGTGTGCGCGGTAAGGAGCACTGGAGCAGCGACTTTGTTTTGACTTCACATATTTA ACTGCCTACCGTTAATAGTTTTTCTTCCAAATTGTTTCTGCAGGCCTTCTTAACAGGCTTTCTGAATCTAATGTTGAATC AATTACTGGAGAACTGTCCTTGATCTTTCAGGTATGCAACTCCTATAATTGTGTGACAATTGACAAATGGATTCTTGACC GATTTTGTGTTATCTAACTTATATTATCTTCTTTTGAAATGGATAAAGAAGAGGTGACAAAGATAATGTAAATGACTATA TGGAGTCTTGCACATTGTTTTTTTCATTCCTATTAACTTTGCATTTAACTTTTAGTCCAACTACTTGACTTGTGGGCTTG AGACATTTATTTACCAACTTTCTTGATAGATGCCTATGTTGGTGAAGCAGACATTTCTTTGCCAACTTTTTGATATATGC CTATGTTTGTGAAGCTTTACTTTTGAGGAGTTCTAGTAACACTCACTTCAACACTCTTTTATTTGTTCAAATTCATTAAA TTGGAAGTGGGACCCATATTTTTAGTGGGCCCACATGAATTTCAACCAATAAAAGATTGAGAGTTGGAAAGAGAGTGTTA ACATGAGTGTTGGTAGCATTATTCTTTACTTTTTGTAGACTAGTTGCTTCTGTTAAACAAAAACAGTTTGTTTCTTTTGG AATTATAACAGCAACTTCTAAGATGTAATCTCTATGCAGTCTGTTGCTCGTAGTGTTGCATCTCGGATTACGATTGAAGA GATTTTAGCATCATGTTCTAGTGGCCCCCGTGGCAATGAACAGTAAGTTTCTTTTCCTTCCTATTTTACTCCTACCTTCC TCTGTGAAGTTGCTAAGTTTGCTTAGCATCATTGTGGTGGTATGGGAAGGTCAGAAAATAAATAAAGATACAAAAACAAC AACCAAGCCTTAACAAATAACAATGATGACCAAGCCAGAACACTAATAAAGATATTCAATCAACTTTAGTTGTAGTGTCA AATAGTAAATGGTTAAGCCATTAAAAGTTGATTGTATAGTGATTTCTAGTTTAGTTATAACCTAAATACTTAGATGCAGA TTGCCGGAGGAGTTAAATTTTACAAGAATGAAAACATAGGAAAAGCAAGATGTTCAGAACATTCTTTGTCAAAACGAAAA GGGAATGGTTAAATAAAACTTATCTGAGAAAATATGTATTTAATATGATTGAATGGCTAAAGATATTGTTATGCAGGATT CTTTTTAGTTTAGAATAACTAATAACTAATAACTAATCTTGAGTGTGAGTTTTATTGTTCCTATTGTGAAGTCTAGGGAT TCAGAGTATTGCTTGTCCTGGGATATTTCATATTCTCTCTCTGAAATAACTCTGAGTATTGTGTGTTGTCCCCAATACCA ACTCCTGTGAATTATTCTGGTGTCCATCTTTCTGGCCTTTTTACGTAGTGTTCACTTCATGGGAACTGATAATTTTTTTC TTGTGAAGGTATGCTGCTGTGTTTGCTGCATTTGTTGCAGGAATGGCCTGTTTGGTTGGTATTGACTTCAGTGCAAAGTT TATGGCTTCCTTTGCTAAATGCTTTGAGGTATAGCTTGTGAACAAATAAACTAAAGTCTAGTTTATCGAAGTGTTTTTTA TTTGTTTCCTTTTTCAGTTTTAGTTTCTTCTCCAGATAAGCATTTGCTCTCAAGGCAGTGTTTGAAGACTACAGAAATTA TAATCTTCATATGTTTTTGACACAGGATGAGTACCATAAAGAAGACAATCTCTCGTTGCGGAATCTTACTCTTCTCCTAT CCTATCTATGTATATTTGGAGTCTGTTCTAGGTGGGCATAGCGTAATGCACAGAGCACTTGTATAACAACTTTTTAAAGT GATTTTTAAAATAATACCTCTTTTTAATGCTTTTCAGTGATTTAATATATGACTTTCTAATAATGCTGAGCAAGCGGTTA GCTGAGATGGATGTTTCTATCATTTTGGCGGTGTTACAATGTAAGTGTTTTGTCTTTTTAATTATGTGTTTGGTTTGTGT TCAGGTCTAATTAGAGCTTCCACTGGTGTAAATTGTAAAGGTTGTTAGAAATATAATATAAAATGTTCATGTCTTCACCC AAAGTATTCTGTCTTTTTCTACTTCGTTGATCTCATATGCATTTTGTTTTGTTGGGTTTGGATGGGGCAACTTCGACATT AAGGAGCTGAATGTTTAAATTTCTACTTTTTAAGGTGACTGTTTAGGGGGGGAGTCTTGTTAGGAGTCCCCACTATTAGT TAACTACTTAGAGTTAGTTAGTAAGTGAGAGGAATACGAGGATATAAATAATGTGAGGGGAAGGGAGTCTTGTTAGGAGT CCCCACTATTAGTTAACTACTTAGAGTTAGTTAGTAAGTGAGAGGAATACGAGGATATAAATAACGTGAGGGGAAGGGAG GTGCAAAGCTTCTTCAGAGTTCTGTTCTGTAAATTAAGAGGTTTTTCCTTACTCTTTTCAATAAAATGCCAGGTTCCTTT ATGAATGCATTAGATAGAATGTAAGGGTAATATCTACTGAGGAAAAGCTTTAGGATCTGGCCTAACAGCATGCTTCAGCT AGAAGCTATTCCACCAGCCTAAACTCTAACTTAGTTCAGTCTGCTATGGGAGCTGTCATATCAATCTTAACAATGCAAAA AACTAACTAAAGAAGCAATTATTAACTGAAGCAAACTAATAAACTTTAAGATGAAGTGTGCCGAGTACACATCTCTCACT CCCGTATTTAGTTAGACCTTTGTTTATGTCTTAGTTCTCAAAACTTGCTTATAAGAGCTTTAGTATGAATATCTGCCGTT TTTCATGTGTTGGAACATGAGAATCACTGGTTCGTTTGTTTCAGCTTGTTCTTAGAAGATCATTTTTTTTCAACTTTTCA CTTGTTTGTTTTAGGTTTTAAAAATATTCATTATTCCAAAAAAGCTGAAATAAGATTATTTGAAAAAGCTACTTTCACTA GCTTATCAAGCAGAGCTATTGCGATAAATGAGACAGAAAATAAAAATTGAAGTAAAATGTTTCTTATTAGTAACCAAACA CAAATAAGCTTGTTTTTCATAAAAATCTCTTTTTTAAGACAGCTAAAAATCATTTTTTAATAATCTTAAACAAGCGCACT CATACTATAAACGTGAAGTCTCAAATAGGGCAATCTTGTAAAATAACACTTAACACACTTTTACTAGAAGGAAAAATATC TATGAACATACTTTTTCTGAACACTTTTTAATGTTTGAATTTTGAAACCACACTCTTAACAGAAAAATACACAAATAGGA TAGCACATGTTAGGATGCATGTTAACACACTTTGTTCTAGTGGAAATGGAAAAAGGAAGAAAAACAAAGACGCCCTTAGT GACTTAGCTTCTCTTGGACAAAAAAAACATCCAACTCCATGTGTTCAGTTCTAGCATGCATAACTAGAGCTGGGTATGCG GTCTAGCCCGCCCCGCATAGGCCCGCACGTTAGCGGGTTTGCCCGTGTAGGCCCGCAAATAAATGAGCCTGTATTTAAGT TAGCCCGCGTCCGCCCCACTGAATGCATAACCGGATCATGACACAAAGCAAAAATGCTTTGCTTTGTCAAAAAAATGGAC GGAGTGGGTACAATGCAGTGACCTACCTAGCCAGGTCTGGATCCAGATGATATCAGCAGCTGAAAGGGCGAGATTATATA TAAGTAGAGCTGGGTAAGCGGGCCAAAGTCCGCGGACCAATCTGCGTAACTGGCGATCCGCATGGCCAATAGCCTGGTGT ATGGTGGTTCACTTAAATGCGGGCCTATCTGGGCTGGCTCGTTTAGCCCGCGGTTTAAATGGGTTGAACCCGCGGTTTTG CAGGCTGGTCCGCGGGCCATATAATTACATAAAAAAATTATCTTCATAGTCCATGAACTACTTTACTTGATCTTGAATTC TTGATAGAGTGGTAAAAAAAAAAACCAACCCAAGAGACCCAAGTGAAGTGAGACACTCATCACTTACCAGACAAGTTACC TTACGTACCCTACTTCTCTTCTCTTACTCTTTTTCTCTTCTGGTTTCCGTCTCTCTCAAGTCTCCCACCGCCACCATGAA ATCTTCTTGCTTTGGATTTGTGGAATATTTTAGAGTTTGATTATGTAATGTGGAATTTGGAGAATTGTTTTGGCAATCAG TTTTTTTCTCTATTGTTTTAGGTTTTTTTGCTTGTTTTATTTTAAAATCTAATAGTGGCCCGCGGGCCAGTTCGTTTATC CGCGGACTATAACTCTTCTGCTTTTATCACTATTTTGCCATTGCTGTGTGAACAGATAATTCCATGTACAGTACCATGGC TGATGGCTGTATTTCGCTAAATAATTAGCCAAAGTAGTGAACCTTCCTGATAGACTCAAATCAGTAACAGTGGAAAAACT GAAGAAAGCAAAGAGAAATTATGAAAATTAATTATTGGATTAACTAAGAAAAAAAGAGAACAAAACTCAGGGTATTCGAG AGACCCTGAACTCTCCTCAAGTCTAGTCCAATCCTTTCCTGTTCTCTCACTCTCCCTCTCCCTCCTAATATAATTTCCCT GCCCCCGTGTCATGAGTGTGTGCGCAACACATTACAATTTATTTATAGGGCTATAACGGCTATGTTCCTGTGCATTGCGC CTATTCTTCTTAGTATACACCCTTTTAATAACTGGGCCTCTATCACATCCTTTGACTTTTTATTGTATTTGTCTTGATAG GTTGTGGGATGAAAATAAGGGCTGATGATCCAACTTCCATGAAAAATTTCATTCTTAGTGTTCAGAATACGTCAAATAAG TTGAAGCCTTCCTCTGGAGATGACCATGAAAAGAAATACAGTAAAAGAGTGAGCATGCTATGTTTATTTATCAGAAAACT GTAGTTTTTCTGCACATACATAATACAGCACTAATTACTTGGTAACACTTGTAGATGGAGTTCATGCTTGAAACCATATG TGACATCAAGAACAACAAGAGCAGGGCAAAAGAGGACCCTGCACATCATACTCGGATTAAGAAGTGGTTACAGAAGGTAC CAATATTTTACGGCTTTTTTGTTCTTGAAGTTCCTTTCTGCAAAGATATTACTTGTTACTGTTCAATTACAGCTTATTTA CAAAAGAAAATGGATTCCTTAATTGAACAAATAAAAATTGTGTAGTTGGTACTTAGCTAGTTTGCCAACTTTCTTATGAT AGGTTTTAATATTGGCATTTCCCACATTGATAAGTGTGCTGTTTTGTGTAGTTAAACAAGACGATCAGCTCAGAAATGAT GTTCCTACATGATTGATCATCCTTGTTTTATAAGACCCAATTATGCATTTTATTTTATGGAATTATTCGAACATATATAA TTGAAGTTCTGAGCTTTCTTTCTATGGCTCTAGGATTTTGTTGAAGCTCATTGCTTATTGAGAGACAAGGCAATGAGTTT AATTCTTATGATGTGGGTAATTTTAAAACAGACGATTTTGAATAACTTTCAAGGGTGTTGGTTTTTTCTTGACAAAATCA TCCTCTTTTTAGAGATGTTCTTATTTACTAATTTTTTGGATTTCGGATTTCCTCTGCCTAGCAGCTCTGATATTGCTTTA TGAATATTCTAGTTGTTATGTCTTTTGTCCGTTTACTTAGCACATTTATTATTGAAAAGGCAATTCATCTTTAGGATTGC TTTGATTCTCTCTGTTATTCAAAAGGCATTCATATGTCCCTCAAATTCTTAATTTAAATTTTGTTTCCAGATAAGAGCTG TTGACATTATGATTAGAGGGCTCAAATGGAGCAAGTTGCTTGATCCTGATAAGAAGGGCCAATGGTGGTTGTCTGGAGAT GTAGCTTCTGCAGCCGATAATGTTGAAGAAGTTGCTGACAGAATAGACAAAGATGTTCTTGAAACACAAAGAATGCTGGA GCTTGCTGCTGCTCAAAAGATGAACACTGATGCCAGAAGGGCAATCTTTTGTATTATAATGAGCGGGGAGGACTATCTTG ATGCATTTGAGAAGCTTCTAAGATTGGAATTACCAGGCAAGCAGGTCAGCCTCTTTTCCAGTTTAATAATGTCTTCTTCC AATTATGAGGCCTTCCATGTCGTGATATATTTTTCGTTCATGTGCTACAGGACAGAGATATAATGAGGGTTCTTGTGGAG TGTTGCTTGCAAGAGAAAGTTTTTAACAAGTATTATACAGTGCTGGCTGTGAAGTTGTGCGAGTATGACAAAAATCATAA GTTCACTCTGCAGGTAATGTTTTCTCACTACTTGTGGGATTGAGATGAGTAATTTGTCATTTGAAGTCGGTTTGTGTAAT AGTCGCCTTGTGAGTCAAAATAGTTACATTTTTATTACTTATATTGAGGGAAAATATGACAAGAGGAGTACTTATTATGA GAAATATGATGCATCATAACTATTGAATTGTAAATTTATAATTACATCTTAAGCAAGTACTTGCACGTCCAATGTTCCAA AAGGAAAGCTAGGAGGGAAGAAACTTCTAAATAAAAATTGTGACGTTACACCCTATAAATATTGTGACCCTCCTCTTAGA ATTCAGGTTAGACCTATATCCAAAAATCACTTAGAGGTGAGGGTTGCTCCACCCTTCATAAGGACTTATTTGGCCATATT TCTAGTCAATGTGAGACTTTTCAAACCTCCCAAAGAAAAAGCATCTTGCTCTATCCTGCCAAAATCTTTATGATGAATTG GAAGAGTTTTTCAGAAAATCTGGATAAAACCTTGCTCCTACAAAATGCGCCCGGTTTTTGTGTCTATTTTACTCTAGATG ATCATAATCAGATATCTGAGGTTGATAGATAAGCAGCCACTATCAAAATATCCTCTTATGTATTTCATGTATAATGTGTA TAGGTGCAATCTCAAAAGTCAATTATGATGCAAATGCCAATATGCTAGAAACAATTAAAGTGAATAATTTCAGGGTTTTT TAGGGTATATTATTGGTTGATTAGAAGTTAGAAGTTTTTTCTTTAACTTTTTTTGTTCATACTTTTAGTTTATCATTTTA GTTTTTGATGATAAATTTTCAAAATCGGTTTACTACTTTTTACATGTCGGATCATTCCTCTACTCTCTGAAATGCTTACT CTTTTATAAAGATGAACCTAAAAAATAGAATTTCTCGGAGATGTAATGCCAGAGAAATTGTATATGGATATATTGGCTTT CAACTACAGGAGCATGTTCTCCTGTCTTGCTTCCTATTATTACATATTTGTAACAATCCTTGATTTGAAGGGGAATCTGA TTCAAAGTTACTTTACTTAAATTGATTTTATCATGATAATACTTCTATGCTGTATCACTTTTAAGAAGAAAAAAAATTCT GTGCCTTTTGATTTGCAGTTTTGCCTGTGGGACCACTTTAAGCGGCTGGAGACAATGCCACTTCTGAGGTCAATGCACCT TTCAAAGTTCGTGGCTGAAATGGTTGCCTCTTTCACTCTCTCCCTTGCAGCTTTGAAGACTGTGGATCTGAGTGATATCA CCCTGTTAACACCAAAAAGGATAATGCATTTCCGCATTCTGTTTGAGGCCATTTTCGAGTATCCTGAGAGCTTGGTATGG AATATATTCACTCGTGCAGCAGTGACCCCTGAACTTGAAGGTCTTCGTCAAGGCATTGAGTTTTTCATTAAGGAGTACAT TGTGAAAACTAATAAAGCTCTAACTCAAAAATTTAAGTTGGCAAGAAGAGCTCTTAATAATATGGAAGGGATTCTGATGT GAGTGTGAATTTTAAATAACACCCAATTTTGTAGCTTATAGCAGTGTCAAAATTTATTTAAATCATTCTTCTGGATATCC TTTTGAATCAGCATTGTGTTCAAATAGTGATAGTCAAATATGCATAGCAGCAAGAATATGTAATATTACTTCGGTAAAGG CCTTAATTTTATAAAGCTGAGGTAAATGCATTGGTGATGTTTCTAGTCAGAAGTTTTGAGCAGAACATTTTAAAAATTTT GAGTGAAAATTACATTGATGAGTTGCATTTTTTAAGTACTTTAAATGGAAAATGAAGAGCATCATACAATGCAACGGTTT CATATATGAAAGTAGAGTTGAAAGTTTGTCGTTTAAAATTTTTGGCGACTGGTGTTGCAGTCTTGTACAGAACCAAACTA TCCACTTCCTTTCATTTTCTTGGTACCTAATAATAATTATAAGGC
CDS sequence (LotjaGi1g1v0327400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAACAAGCTGCTGGGAAATCACGCCGAGAGCGAAGGAAAGAATCCCGATTGGCCAAAAATGCATCAAAGCACCA ATCTTGGCTCAACCACCAGAAATCTAGAGCTGCTATTAAAGGAGGGAGTAATGATTCGGAGTTGAAAACTAAAAGTGAAT TAGACCAGTCAGTTAGTCCAAATACCCATGAAAAACAAGTTGTGAAGTTGGAATCTTTTTCTGGGAAACATGAGGCTGCT AAAGAATACAATGTGCCAGAGGAAATTCGTGGCTCTGTACCGAAGAAAATGAGCAAGGATGCTCAAAGAAGTTTAAGGAA GAAGAGGGCTAAGATGAGTGTGATGGATTTTTCCGTAGAGGACAATAAGGATATAGAATTGGAAAGAAAACTTTCCAAGA AGCTCAAGGTGAAGGAAGGAAAATTGAGCGGGATGGATGATGGGCTGAATGTGTTACTTGAAGGAATGTCATCGTTTGCC GATTTAATGGGAGAAGGGGAGGATTCCGATACCGATGAATTTCCTGTGAAGCGGTTGAAGAAGAAGAGCTCGTCGAGTAA GAAGCATAAGTTGTCAAAGGGAAAGATTGAAGAACAAGTATTAGATGGTGCGTCGGGGCCTTTAGAAACTTATAATCAAG ATGTAGCATCAGAAGTTCCTGACAGTGTACCTTCGAGGAAGAACCATAAGAAAAGAAAATCTCCAGATCAACAGCTGGAA GATGACGCGGAGCATGATGCCGGTGACATGTCCAAGCCTCCAGAATCCTGTGGGACAGAGGTCACATCACAGGTTGCTCC TGCTGAAGTTCTGGTGAAGAAAGCAAAAGAAAAATATATAGCACCTCACTTGAGAGCTCGCGCTGGCAATGAACCTGAAG AGCATACTCAAATTCGAAGACGTGTGCGCGGCCTTCTTAACAGGCTTTCTGAATCTAATGTTGAATCAATTACTGGAGAA CTGTCCTTGATCTTTCAGTCTGTTGCTCGTAGTGTTGCATCTCGGATTACGATTGAAGAGATTTTAGCATCATGTTCTAG TGGCCCCCGTGGCAATGAACAGTATGCTGCTGTGTTTGCTGCATTTGTTGCAGGAATGGCCTGTTTGGTTGGTATTGACT TCAGTGCAAAGTTTATGGCTTCCTTTGCTAAATGCTTTGAGGATGAGTACCATAAAGAAGACAATCTCTCGTTGCGGAAT CTTACTCTTCTCCTATCCTATCTATGTATATTTGGAGTCTGTTCTAGTGATTTAATATATGACTTTCTAATAATGCTGAG CAAGCGGTTAGCTGAGATGGATGTTTCTATCATTTTGGCGGTGTTACAATGTTGTGGGATGAAAATAAGGGCTGATGATC CAACTTCCATGAAAAATTTCATTCTTAGTGTTCAGAATACGTCAAATAAGTTGAAGCCTTCCTCTGGAGATGACCATGAA AAGAAATACAGTAAAAGAATGGAGTTCATGCTTGAAACCATATGTGACATCAAGAACAACAAGAGCAGGGCAAAAGAGGA CCCTGCACATCATACTCGGATTAAGAAGTGGTTACAGAAGATAAGAGCTGTTGACATTATGATTAGAGGGCTCAAATGGA GCAAGTTGCTTGATCCTGATAAGAAGGGCCAATGGTGGTTGTCTGGAGATGTAGCTTCTGCAGCCGATAATGTTGAAGAA GTTGCTGACAGAATAGACAAAGATGTTCTTGAAACACAAAGAATGCTGGAGCTTGCTGCTGCTCAAAAGATGAACACTGA TGCCAGAAGGGCAATCTTTTGTATTATAATGAGCGGGGAGGACTATCTTGATGCATTTGAGAAGCTTCTAAGATTGGAAT TACCAGGCAAGCAGGACAGAGATATAATGAGGGTTCTTGTGGAGTGTTGCTTGCAAGAGAAAGTTTTTAACAAGTATTAT ACAGTGCTGGCTGTGAAGTTGTGCGAGTATGACAAAAATCATAAGTTCACTCTGCAGTTTTGCCTGTGGGACCACTTTAA GCGGCTGGAGACAATGCCACTTCTGAGGTCAATGCACCTTTCAAAGTTCGTGGCTGAAATGGTTGCCTCTTTCACTCTCT CCCTTGCAGCTTTGAAGACTGTGGATCTGAGTGATATCACCCTGTTAACACCAAAAAGGATAATGCATTTCCGCATTCTG TTTGAGGCCATTTTCGAGTATCCTGAGAGCTTGGTATGGAATATATTCACTCGTGCAGCAGTGACCCCTGAACTTGAAGG TCTTCGTCAAGGCATTGAGTTTTTCATTAAGGAGTACATTGTGAAAACTAATAAAGCTCTAACTCAAAAATTTAAGTTGG CAAGAAGAGCTCTTAATAATATGGAAGGGATTCTGATGTGA
Protein sequence (LotjaGi1g1v0327400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEQAAGKSRRERRKESRLAKNASKHQSWLNHQKSRAAIKGGSNDSELKTKSELDQSVSPNTHEKQVVKLESFSGKHEAA KEYNVPEEIRGSVPKKMSKDAQRSLRKKRAKMSVMDFSVEDNKDIELERKLSKKLKVKEGKLSGMDDGLNVLLEGMSSFA DLMGEGEDSDTDEFPVKRLKKKSSSSKKHKLSKGKIEEQVLDGASGPLETYNQDVASEVPDSVPSRKNHKKRKSPDQQLE DDAEHDAGDMSKPPESCGTEVTSQVAPAEVLVKKAKEKYIAPHLRARAGNEPEEHTQIRRRVRGLLNRLSESNVESITGE LSLIFQSVARSVASRITIEEILASCSSGPRGNEQYAAVFAAFVAGMACLVGIDFSAKFMASFAKCFEDEYHKEDNLSLRN LTLLLSYLCIFGVCSSDLIYDFLIMLSKRLAEMDVSIILAVLQCCGMKIRADDPTSMKNFILSVQNTSNKLKPSSGDDHE KKYSKRMEFMLETICDIKNNKSRAKEDPAHHTRIKKWLQKIRAVDIMIRGLKWSKLLDPDKKGQWWLSGDVASAADNVEE VADRIDKDVLETQRMLELAAAQKMNTDARRAIFCIIMSGEDYLDAFEKLLRLELPGKQDRDIMRVLVECCLQEKVFNKYY TVLAVKLCEYDKNHKFTLQFCLWDHFKRLETMPLLRSMHLSKFVAEMVASFTLSLAALKTVDLSDITLLTPKRIMHFRIL FEAIFEYPESLVWNIFTRAAVTPELEGLRQGIEFFIKEYIVKTNKALTQKFKLARRALNNMEGILM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 354 | 354 | - | – | |
MobiDBLite | 1 | 22 | 22 | - | – | |
MobiDBLite | 1 | 111 | 111 | - | – | |
PANTHER | 3 | 781 | 779 | 4.7E-268 | – | |
PANTHER | 3 | 781 | 779 | 4.7E-268 | – | |
MobiDBLite | 23 | 40 | 18 | - | – | |
MobiDBLite | 53 | 68 | 16 | - | – | |
MobiDBLite | 69 | 100 | 32 | - | – | |
MobiDBLite | 162 | 263 | 102 | - | – | |
MobiDBLite | 233 | 251 | 19 | - | – | |
Gene3D | 266 | 542 | 277 | 6.5E-51 | ||
SUPERFAMILY | 292 | 501 | 210 | 1.61E-25 | ||
SMART | 299 | 501 | 203 | 2.3E-21 | ||
Pfam | 300 | 501 | 202 | 3.3E-17 | ||
Phobius | 355 | 380 | 26 | - | – | |
Phobius | 381 | 400 | 20 | - | – | |
Phobius | 401 | 420 | 20 | - | – | |
Phobius | 421 | 786 | 366 | - | – | |
ProSiteProfiles | 587 | 703 | 117 | 20.709 | ||
SMART | 588 | 694 | 107 | 1.9E-16 | ||
Pfam | 589 | 690 | 102 | 6.6E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0327400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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