Domain Predictions — View

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SSF57277

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v1686700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cysteine proteinase RD21a-like isoform X1 [Cicer arietinum] gi\|502120445\|ref\|XP_004496965.1\|	Domains IPR013128 PTHR12411 PTHR12411:SF344 SSF57277	4
Lj1g3v2139680.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: oryzain alpha chain-like [Cicer arietinum] gi\|502131381\|ref\|XP_004500967.1\|	Domains G3DSA:3.90.70.10 IPR000118 IPR000169 IPR000668 IPR013128 IPR013201 IPR025660 IPR025661 NON_CYTOPLASMIC_DOMAIN PF00112 PF00396 PF08246 PR00705 PS00139 PS00639 PS00640 PTHR12411 PTHR12411:SF387 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00277 SM00645 SM00848 SSF54001 SSF57277 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TMhelix cd02248	32
Lj5g3v0294860.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cysteine proteinase RD21a-like [Cicer arietinum] gi\|502125689\|ref\|XP_004499026.1\|	Domains G3DSA:3.90.70.10 IPR000118 IPR000169 IPR000668 IPR013128 IPR013201 IPR025660 IPR025661 NON_CYTOPLASMIC_DOMAIN PF00112 PF00396 PF08246 PR00705 PS00139 PS00639 PS00640 PTHR12411 PTHR12411:SF352 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00277 SM00645 SM00848 SSF54001 SSF57277 SignalP-noTM_EUK TMhelix cd02248	30
Lj5g3v2133770.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cysteine proteinase RD21a-like isoform X1 [Cicer arietinum] gi\|502120445\|ref\|XP_004496965.1\|	Domains G3DSA:3.90.70.10 IPR000118 IPR000169 IPR000668 IPR013128 IPR013201 IPR025660 IPR025661 NON_CYTOPLASMIC_DOMAIN PF00112 PF00396 PF08246 PR00705 PS00139 PS00639 PS00640 PTHR12411 PTHR12411:SF344 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00277 SM00645 SM00848 SSF54001 SSF57277 SignalP-TM_GRAM_NEGATIVE TMhelix cd02248	30
LotjaGi1g1v0423400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cysteine protease family protein; TAIR: AT1G09850.1 xylem bark cysteine peptidase 3; Swiss-Prot: sp\|Q9LT78\|RD21C_ARATH Probable cysteine protease RD21C; TrEMBL-Plants: tr\|A0A1J7IIQ9\|A0A1J7IIQ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0423400	Domains G3DSA:3.10.20.500 G3DSA:3.90.70.10 IPR000118 IPR000169 IPR000668 IPR013201 IPR025660 IPR025661 IPR037277 IPR038765 IPR039417 NON_CYTOPLASMIC_DOMAIN PF00112 PF00396 PF08246 PR00705 PS00139 PS00639 PS00640 PTHR12411 PTHR12411:SF659 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00277 SM00645 SM00848 SSF54001 SSF57277 SignalP-TM SignalP-noTM TMhelix cd02248	34
LotjaGi5g1v0030300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cysteine proteinase; TAIR: AT1G47128.1 Granulin repeat cysteine protease family protein; Swiss-Prot: sp\|P43297\|RD21A_ARATH Cysteine proteinase RD21A; TrEMBL-Plants: tr\|A0A1J7IKX0\|A0A1J7IKX0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0030300	Domains G3DSA:3.10.20.500 G3DSA:3.90.70.10 IPR000118 IPR000169 IPR000668 IPR013201 IPR025660 IPR025661 IPR037277 IPR038765 IPR039417 NON_CYTOPLASMIC_DOMAIN PF00112 PF00396 PF08246 PR00705 PS00139 PS00639 PS00640 PTHR12411 PTHR12411:SF523 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00277 SM00645 SM00848 SSF54001 SSF57277 SignalP-noTM TMhelix cd02248	33
LotjaGi5g1v0329500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cysteine protease, putative; TAIR: AT5G43060.1 Granulin repeat cysteine protease family protein; Swiss-Prot: sp\|Q9FMH8\|RD21B_ARATH Probable cysteine protease RD21B; TrEMBL-Plants: tr\|A0A1J7HJC8\|A0A1J7HJC8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0329500	Domains G3DSA:3.10.20.500 G3DSA:3.90.70.10 IPR000118 IPR000169 IPR000668 IPR013201 IPR025660 IPR025661 IPR037277 IPR038765 IPR039417 NON_CYTOPLASMIC_DOMAIN PF00112 PF00396 PF08246 PR00705 PS00139 PS00639 PS00640 PTHR12411 PTHR12411:SF526 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00277 SM00645 SM00848 SSF54001 SSF57277 SignalP-TM TMhelix cd02248	33
LotjaGi6g1v0322400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cysteine protease; TAIR: AT1G09850.1 xylem bark cysteine peptidase 3; Swiss-Prot: sp\|P25776\|ORYA_ORYSJ Oryzain alpha chain; TrEMBL-Plants: tr\|A0A151S6D2\|A0A151S6D2_CAJCA Cysteine proteinase RD21a; Found in the gene: LotjaGi6g1v0322400	Domains G3DSA:3.10.20.500 G3DSA:3.90.70.10 IPR000118 IPR000169 IPR000668 IPR013201 IPR025660 IPR025661 IPR037277 IPR038765 IPR039417 NON_CYTOPLASMIC_DOMAIN PF00112 PF00396 PF08246 PR00705 PS00139 PS00639 PS00640 PTHR12411 PTHR12411:SF658 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00277 SM00645 SM00848 SSF101447 SSF54001 SSF57277 SignalP-TM TMhelix cd02248 mobidb-lite	35

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	12.50