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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2133770 |
| Transcript ID | Lj5g3v2133770.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cysteine proteinase RD21a-like isoform X1 [Cicer arietinum] gi|502120445|ref|XP_004496965.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 9 | 20 | 12 | – | – | |
| PANTHER | 11 | 429 | 419 | 1.10E-257 | ||
| PANTHER | 11 | 429 | 419 | 1.10E-257 | – | |
| Gene3D | 17 | 355 | 339 | 2.00E-125 | – | |
| Phobius | 21 | 24 | 4 | – | – | |
| Phobius | 25 | 469 | 445 | – | – | |
| SUPERFAMILY | 41 | 355 | 315 | 3.05E-115 | – | |
| Pfam | 48 | 106 | 59 | 3.60E-17 | ||
| SMART | 48 | 106 | 59 | 8.60E-26 | ||
| SMART | 139 | 355 | 217 | 1.10E-129 | ||
| Pfam | 139 | 355 | 217 | 5.40E-87 | ||
| CDD | 140 | 354 | 215 | 2.39E-109 | – | |
| PRINTS | 157 | 172 | 16 | 8.00E-11 | ||
| ProSitePatterns | 157 | 168 | 12 | – | ||
| ProSitePatterns | 297 | 307 | 11 | – | ||
| PRINTS | 299 | 309 | 11 | 8.00E-11 | ||
| PRINTS | 314 | 320 | 7 | 8.00E-11 | ||
| ProSitePatterns | 314 | 333 | 20 | – | ||
| SUPERFAMILY | 376 | 409 | 34 | 1.37E-10 | – | |
| SMART | 378 | 435 | 58 | 4.00E-26 | ||
| Pfam | 389 | 436 | 48 | 9.90E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Cysteine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. |
Expression pattern of Lj5g3v2133770.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2133770.1, powered by CORGI.
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