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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0030300 |
| Transcript ID | LotjaGi5g1v0030300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine proteinase; TAIR: AT1G47128.1 Granulin repeat cysteine protease family protein; Swiss-Prot: sp|P43297|RD21A_ARATH Cysteine proteinase RD21A; TrEMBL-Plants: tr|A0A1J7IKX0|A0A1J7IKX0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0030300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:4905234..4911357) extracted from Lotus japonicus Gifu genome v1.2.
CGCTGATATTCTTTTCCTACCTAAGCTACAATGATTATCCGTTAATTATTAATTAACCATTTAAACATTTTTAATTTAAT CCAATCTCTTACCCCTTCCGTCTTTATAAGGTCCACGTTCACTGCACCATTTTCTCCACTCCCACCTTCTTCTTCTTCCT CCTCCCAATCCCATCTCCCAAAAATGGGTTCAGCTACCATGGCGATCGTCCTCATGTTCACTCTCCTGGCGGTTTCCTCC GCCATGGACATGTCGATCATCTCATACGACAACTCCCACATGGGAAACTCCAGAACTGACGACGAGGTGAAGAACATGTA CGAGGAGTGGTTGGTGAAACACGGCAAGGTGTACAACGCGCTTGGCGAGAAGGAGAAGAGGTTTGAGATCTTCAAAGACA ACCTCAAGTTCATCGATGAGCATAACAACGCTGATCTGAACCGGAGTTACAAGCTGGGTCTGAACCGGTTCGCTGATCTG ACCAACGAGGAGTACCGGTCTAAGTACTTTGGGACCCGGGTTGACCCGAACCGGAGGATGGCGAAGTTGAGGACCAAGAG TGACCGGTACGCGCCACGTGTCGGTGACAAGCTGCCGGAGTCTGTTGATTGGAGGAAGGAAGGTGCTCTTGTTGGAGTCA AAGACCAAGGAAGCTGCGGTATGTGCTTTTTTCACTCTTGTCTTCATTCATTCACTCTTTGCCCTCTACTTTACCTTTTG AAATAAAAGAAGAAAAAATCTGGAAAGTTTAATTCTTTGCTTCTTTTATGATCATCATCGTTGATTTACTTTTTGAAATT AATCCCGTTTTATAATTATGAGCAGTACTTTTTTATGATTTTATTTTTGATCTGTTGCTTTGTTGTTGCTTGATCATCCA CATGACCTAATAATATCTGAAAAAAAGTTTTTATTTGTTTGATTTAGTATTTAAAATTTCATACAATATAAATGATCAAT CTCTAGAGGATGCAATTTATCTTTACGATGTACTAAAAAAAAGTTTAATTACTAGTGTCAAATGTCAATCAATTAGAATT CATCATGGTATAATTAAATTTAAATTTAAAAATATTTTAAATGATAAAATGAGTCATTATGATTAGATATATGTATTAAA CTCAAGTTTTTTTTTTTGAAATGGTATTAAATTCAAGTGAACAAAAAAAAATATGTATTGAACTCTTTACATACTGTCAA TAATTTAGATATCTCATGTAGTAGTGTTATTTTTTTGTCGTTGTTCTTGTTGTAAATAGTGATGAGTACCTAACTGATTT TATCGTATATTTTTAAAATAAAGTAATATGAAATATAAAATTATATACATAGGAAAGTTTAATTTTTAAAATGTTTAGTT TATCTAATACTTAGTAGTTATCATCATGGACTCATGGTGTTGATATTATATGGTTCAATCATTGAATTCACAATAAGAAG TAATTAAATTAAATAATTTTGAGAATCATCGCTAGTGGATCTCCACTACTGGAAAAGGATTTTTTCTTTTTGGACTTAAA ACTCAAATAAAAGGCATGATTCATTAAAAATTCAATTTTGAGACTCCTTTAAAATTTTCAGGTTAGTTCCTATGATTTCA TAATTCTGGCATGATTCTTAGCTGCTACTTGACATGAAATATCTTGTTTTGGACTTTTGGGTCTTTGAGTCTAACTTTAT TTAGGATGCCCAACTGTATTTCCTTGTGAAAGGTGAAGCTTTTATAGTTACAGCTCATGAAACTTGGCCAAAATAATTTT ATTGTGAAAATAATTTTTTTCCTTTGTAATTAAATCTATTATTCACAGTCCCATTTGTACTGTAATCAAAATCTTTAGTA GTTTGGATTTTGGTCATGAAAGGTGTGATTGTTGACTATTCTTGTCGTATTCCTTTAATTCAATGAGTTTCTGGGCAGAA TTGAGTCTAAAGAATCTCTAGTTTTTCACGAAATTTCCTATTATGATATAATAGATATGGTTAATTAAAATGTCTGAATT TTTTCAATGAAGGGAGCTGTTGGGCCTTCTCAGCTGTCACCGCCGTGGAATCAATTAATAAGATAGTAACCGGCGATCTA GTTTCACTATCAGTACAAGAGCTAGTAGACTGTGATAGATCATATAATGAAGGATGCAATGGTGGTCTTATGGACTACGC CTTTGACTTCATCATCAACAATGGTGGCATTGACTCCGAAGAAGATTACCCCTACAAAGGTGTTGATGGTAGATGTGACC AGTACAGGGTTAGCCCCTAACATAATCATTTGCTGATAGATTCATGTGAAAATATTGTTTCTTATCACTTATTCTTGCAT TTGTTTTTAATTGATTTGGTTGTGTTTTTTGTGTGCAGAAAAATGCTAAAGTCGTTTCAATTGATGACTATGAAGATGTT CCTACCTATGATGAGATAGCCTTGAAGAAAGCTGTTGCCAATCAGCCTATTAGTGTTGCTATTGAAGGAGGTGGCAGGGA ATTCCAGTTATATGATTCTGTAAGTTTTCTAAATTCATTTTGTTCTCTACAATCACGTAAATCCTAAAATCACTCACTCA AGAAATCTGAGTTAGTCAAGAAATCTGAGTCGTTTTACTAAAATCGGACAACTTAAATTTTGAGCTTATCTCTGTTGTCC GATCTAGATGAAACATGTGTCGTCGGATCTTGATTGAACGGCTCAGATTTCTTGACTTTGTGGATTTAGGATTCCCCGAC CGGAGGATCCGAAATCACTACATAGCATAGGAGAAGTAGAATTGTAAAAGTTAAATGTCCATCTATTTTCATTGTTGCCC TATGCATTTGATAGAGACCAAGATACCATATATTGTTTTTGAATTAAAAGTTAAAACCATGCATATTTAGAGTTGGTTTA CCAAGATTAGTGGTTGCTGTTGTATTGGGCAAGTTTTCTTATTTTGGGTGTCCAATTTCTCTTTTGTTAGGGTATATTCA CTGGGCGATGTGGGACAGCATTAGACCATGGTGTTGTTGCTGTTGGGTATGGCACAGAAAACGGTCTTGATTATTGGATT GTGAGGAATTCATGGGGTGCTAGCTGGGGAGAGGGAGGTTATATCAGGCTTGAACGTAATCTGGGAAATGCTAGATCAGG CAAGTGTGGAATTGCAATTGAGCCATCCTATCCCATCAAGAATGGTCAGAACCCGCCTAACCCGGGGCCATCACCCCCTT CACCGGTGACTCCACCGTCAGTGTGTGACAATTACTACAGTTGTGCTGAAGCCACCACTTGCTGCTGCATTTATGAATAT GGAAACTCTTGCTTTGAGTGGGGATGTTGTCCTCTCGAGGGTGCTACCTGCTGTGATGACCACTACAGTTGCTGCCCCAG TGACTACCCTGTCTGTGACACTTATAGAGGGCTCTGTCTCAAGGTATGAGTTACTTGTCCAACTAATCTTTTATTTGGTT GCATCTTCACTTTGAACTAAGTGCGTGTTTGGATGTCAGAATTACTTTGCATAAGCTTGATTTTTGCAATATTGTTGAAG GTAAATGTGAGTTCAGAGTGAATTGATTTTTGTTTACATAATTATTATAAGAAAATTGATTTTAGTAGGGCAACTATGTG CAATCTCGTAATAAAATCTCATTATTTATTATGTTTGTTGCAGAAACTGAGATTGGTAGGTTTATCTCCGAATTGATTTT TGCACTAGAATTATTTGTGAAAGAAAATATCTAAATACCTAGGAGTTAAGTTTGATAGTGGTGAATCCACTCTATCACTT GTAAGTGCATGATTGTAAACTTTTACAATTGATTCAAACGTCAAATCAGTTATGGGGAGAAGTTATTGTGAGGTTCTACC TGGTTTCAAAATTGATTGTGAGGAAAGAGAAACTGATCGATATAGTCGACCCTACTTAGTTCGATAAGGTTTTTGTTGTT ACTTTAATGATACGGTCCCTTTTCATTCTCAGTAACATTTTCATGAATTGTTTGCACTCTTGCTTATCTGAATTTTCTAT GCATTATTTATGACAGGGCTCAAACAACCCATTTGGAGTGAAGGCATTGAAGCGAACTCCAGCTAAGCCCAACTTGGCCT TTGGAGTGAAGAAGAAGAAGATCAGCGATGCTTAAGCTGTTAAAAAGCGAATGTGTACATGATGAAGTTGAAGATAAGAA AGTCAAAGGGAGGACCAAGAACTGAAACACTATACTCTTTCCCTTTACTTGCAGCACATAATAACATGTACATCTTCGCA TTATGATACACAAACAGATACATTCTGTGCCAAATTTCAGTCATGCATTTGACTGTGTACATAGGGTTATTATTTATGTC TGTCCTGTATTTCTATTCTAATTCCAAACAATGAACATATTTTCATTATTGTACTTAATTTCCAACCTTGGTAGATTATG TGGTCATGGCTGGATTTACCCCATATTCATATGCTATTTTATAAGCATGGTTAATTTGAAATTTGTGTTGTGAAGATGTC TTGATTTAATAGCGTAAATTTGTGCAGAGAATATATGGACCAAAGTGGTAACACTAAACACATTAATAAAATATTAAGTT AGTGGATGATTGACTTTTTTTATCGGGCAACAAGATGAACAACATCTGAAGTTTTTTTTTTTGATAATCATGAACAACAT TTTAAGTAAGTAGGTAAGTTTTATCCTCTTTGTAATCCAATTTTTTTTTTTTTAAATCTAGAGTGAGAGGTATATTTTAT GCAACTTTATTTGTATGGGGAGAAAATGAAATAAGTAGATAGGTGAGAGCGGTTAGTGGTTGCAACATTTATTTTTTAAA AGCTCAACATTTCTCACTTAACTTGTTAAAATATAAACCAATTATAATGAGTGGGTTGAGGTATTTCATTAAAATAGTGT GTTGCTAACACTTCTCTTTGAATTTAAATGAATGTTTTGTTTTGGGTAATTAAAATAGGTATTTCATTTAAAGCTTGGGG TCTCCCTCCAAAATTTAAATAATGTTGATGTTAGAAATATAATATAAAATCATTTATGTTTTTTCATTGAAGAGCTTAAA CTTAGGAATAGTTAGTTGTTGACATGATATTAGAAAGCCTCCATGACTAAGTGATTTAGAGTTGAAGTATATGTGCATTT GCACGAGAAACTTACTAGTAAAAATATAAAATATTGTGCAAGGTATGTGGGCCTACCAATTATATGAGAGGCAAGTTAGA AAGATAATATAAAATCATTGTGTTTCTTCACCCAAAAGCTTAAGCTTGGGGATTGATAGACAATATAAATATCTCTCTTA CATAATTACAAGCAAACTACTGAAATTATGAGTGGTTATGTATATGCACTTATGCTTCTACCCAAATCAAGATTCAATTA AATTGATCTCCCTGCATTTCCCTTTTGATCTCCATCACCAGCAAGCTGTAAACTGCAATCCTCAATCTTCACTTTCTGGC CTGAGCTGTTGATCCAATTGGTTTTAGGAACTTGAGGGTGATAATGGGGTGGAGTAACAGAGGGAAGCTTTGACAGAAGA TCTCCAAAACTGCAAGACATGTTGGGCAAGGAAGAAGGAACTGAAAGGGGTGGTCCTGTTGTTCCATTTTGAGGGTGGTT TCTACCCAAATTGATGGCAATCATGGAAAAGAAACTTGGTCTTTCTTTATGCAGCAATCCATTGACATGAGTTACTTGGT TATTGTCATTGTAGGTTGATTGAGCCATTTCATTGGTTTCCATCATTTGGAGATTGGATTTGGCAATGCATGGATGTTGG ATGGCTTTGTATGGTCTTTGAATGGTCAAAACACCTGGTATGTTCTGGAGGTAGATGAACTTCCTTTGTAAGCTGAGCAC TAAATCAAGATCTTCTGCAATCTGAAACAAGTTGTGATTTAGAGCATGTTTGGAAATCCTTCTAAATTTGATTTTAAAGT CAAAATCAATTCTGGGGAGAAGTGTCTGTGGGTGGCTGAGTGCCAGAATTGATTATGAGAAAAAATAAGCTGATTCTAAC ATGCTATTGATAATAAGTAGAAATTTTGCATGAAATGTGGAATATTTGGAAGGTAAAAAGGAGAAAGACCTTGTTAAATG AACCCAATTGTACTAAGCCTTCTTTAACAGCAATGACAGCAATA
CDS sequence (LotjaGi5g1v0030300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCAGCTACCATGGCGATCGTCCTCATGTTCACTCTCCTGGCGGTTTCCTCCGCCATGGACATGTCGATCATCTC ATACGACAACTCCCACATGGGAAACTCCAGAACTGACGACGAGGTGAAGAACATGTACGAGGAGTGGTTGGTGAAACACG GCAAGGTGTACAACGCGCTTGGCGAGAAGGAGAAGAGGTTTGAGATCTTCAAAGACAACCTCAAGTTCATCGATGAGCAT AACAACGCTGATCTGAACCGGAGTTACAAGCTGGGTCTGAACCGGTTCGCTGATCTGACCAACGAGGAGTACCGGTCTAA GTACTTTGGGACCCGGGTTGACCCGAACCGGAGGATGGCGAAGTTGAGGACCAAGAGTGACCGGTACGCGCCACGTGTCG GTGACAAGCTGCCGGAGTCTGTTGATTGGAGGAAGGAAGGTGCTCTTGTTGGAGTCAAAGACCAAGGAAGCTGCGGGAGC TGTTGGGCCTTCTCAGCTGTCACCGCCGTGGAATCAATTAATAAGATAGTAACCGGCGATCTAGTTTCACTATCAGTACA AGAGCTAGTAGACTGTGATAGATCATATAATGAAGGATGCAATGGTGGTCTTATGGACTACGCCTTTGACTTCATCATCA ACAATGGTGGCATTGACTCCGAAGAAGATTACCCCTACAAAGGTGTTGATGGTAGATGTGACCAGTACAGGAAAAATGCT AAAGTCGTTTCAATTGATGACTATGAAGATGTTCCTACCTATGATGAGATAGCCTTGAAGAAAGCTGTTGCCAATCAGCC TATTAGTGTTGCTATTGAAGGAGGTGGCAGGGAATTCCAGTTATATGATTCTGGTATATTCACTGGGCGATGTGGGACAG CATTAGACCATGGTGTTGTTGCTGTTGGGTATGGCACAGAAAACGGTCTTGATTATTGGATTGTGAGGAATTCATGGGGT GCTAGCTGGGGAGAGGGAGGTTATATCAGGCTTGAACGTAATCTGGGAAATGCTAGATCAGGCAAGTGTGGAATTGCAAT TGAGCCATCCTATCCCATCAAGAATGGTCAGAACCCGCCTAACCCGGGGCCATCACCCCCTTCACCGGTGACTCCACCGT CAGTGTGTGACAATTACTACAGTTGTGCTGAAGCCACCACTTGCTGCTGCATTTATGAATATGGAAACTCTTGCTTTGAG TGGGGATGTTGTCCTCTCGAGGGTGCTACCTGCTGTGATGACCACTACAGTTGCTGCCCCAGTGACTACCCTGTCTGTGA CACTTATAGAGGGCTCTGTCTCAAGGGCTCAAACAACCCATTTGGAGTGAAGGCATTGAAGCGAACTCCAGCTAAGCCCA ACTTGGCCTTTGGAGTGAAGAAGAAGAAGATCAGCGATGCTTAA
Protein sequence (LotjaGi5g1v0030300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSATMAIVLMFTLLAVSSAMDMSIISYDNSHMGNSRTDDEVKNMYEEWLVKHGKVYNALGEKEKRFEIFKDNLKFIDEH NNADLNRSYKLGLNRFADLTNEEYRSKYFGTRVDPNRRMAKLRTKSDRYAPRVGDKLPESVDWRKEGALVGVKDQGSCGS CWAFSAVTAVESINKIVTGDLVSLSVQELVDCDRSYNEGCNGGLMDYAFDFIINNGGIDSEEDYPYKGVDGRCDQYRKNA KVVSIDDYEDVPTYDEIALKKAVANQPISVAIEGGGREFQLYDSGIFTGRCGTALDHGVVAVGYGTENGLDYWIVRNSWG ASWGEGGYIRLERNLGNARSGKCGIAIEPSYPIKNGQNPPNPGPSPPSPVTPPSVCDNYYSCAEATTCCCIYEYGNSCFE WGCCPLEGATCCDDHYSCCPSDYPVCDTYRGLCLKGSNNPFGVKALKRTPAKPNLAFGVKKKKISDA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| PANTHER | 5 | 388 | 384 | 2.7E-172 | – | |
| PANTHER | 5 | 388 | 384 | 2.7E-172 | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Gene3D | 17 | 354 | 338 | 1.1E-115 | – | |
| Phobius | 21 | 467 | 447 | - | – | |
| SUPERFAMILY | 38 | 353 | 316 | 7.12E-112 | ||
| Pfam | 46 | 104 | 59 | 9.0E-18 | ||
| SMART | 46 | 104 | 59 | 1.2E-26 | ||
| Pfam | 137 | 353 | 217 | 1.5E-79 | ||
| SMART | 137 | 353 | 217 | 1.4E-121 | ||
| CDD | 138 | 352 | 215 | 1.24264E-106 | ||
| ProSitePatterns | 155 | 166 | 12 | - | ||
| PRINTS | 155 | 170 | 16 | 3.1E-10 | ||
| ProSitePatterns | 295 | 305 | 11 | - | ||
| PRINTS | 297 | 307 | 11 | 3.1E-10 | ||
| PRINTS | 312 | 318 | 7 | 3.1E-10 | ||
| ProSitePatterns | 312 | 331 | 20 | - | ||
| Gene3D | 373 | 436 | 64 | 2.9E-12 | ||
| SUPERFAMILY | 373 | 407 | 35 | 1.96E-11 | – | |
| SMART | 376 | 433 | 58 | 3.2E-25 | ||
| Pfam | 387 | 434 | 48 | 8.3E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Cysteine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. |
Expression pattern of LotjaGi5g1v0030300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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