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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | RNA splicing | The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. | ||
| Cellular component | Exon-exon junction complex | A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: protein mago nashi homolog [Cicer arietinum] gi|502132054|ref|XP_004501210.1| | 8 | ||
| – | PREDICTED: protein mago nashi homolog [Cicer arietinum] gi|502132054|ref|XP_004501210.1| | 5 | ||
| – | PREDICTED: protein mago nashi homolog [Cicer arietinum] gi|502132054|ref|XP_004501210.1| | 6 | ||
| – | Protein mago nashi like; TAIR: AT1G02140.1 mago nashi family protein; Swiss-Prot: sp|O65806|MGN_EUPLA Protein mago nashi homolog; TrEMBL-Plants: tr|I3RZM3|I3RZM3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0068100 | 8 | ||
| – | Protein mago nashi like; TAIR: AT1G02140.1 mago nashi family protein; Swiss-Prot: sp|O23676|MGN_ARATH Protein mago nashi homolog; TrEMBL-Plants: tr|I3RZM3|I3RZM3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0068100 | 8 | ||
| – | Protein mago nashi like; TAIR: AT1G02140.1 mago nashi family protein; Swiss-Prot: sp|O23676|MGN_ARATH Protein mago nashi homolog; TrEMBL-Plants: tr|I1JMP2|I1JMP2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0068100 | 11 | ||
| – | Protein mago nashi like; TAIR: AT1G02140.1 mago nashi family protein; Swiss-Prot: sp|O65806|MGN_EUPLA Protein mago nashi homolog; TrEMBL-Plants: tr|I3T8H3|I3T8H3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0551700 | 8 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd11295 | CDD | 1 | 14.29 |