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TIGR00451

Description

unchar_dom_2: uncharacterized domain 2

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
Malignant T cell-amplified sequence 1-A [Medicago truncatula] gi|357464025|ref|XP_003602294.1| 13
PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine max] gi|356525850|ref|XP_003531534.1| 24
PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine max] gi|356525850|ref|XP_003531534.1| 24
Malignant T-cell-amplified sequence 1; TAIR: AT1G09150.1 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein; Swiss-Prot: sp|Q2KIE4|MCTS1_BOVIN Malignant T-cell-amplified sequence 1; TrEMBL-Plants: tr|I3SF98|I3SF98_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0290800 17
Malignant T-cell-amplified sequence 1 like; TAIR: AT1G09150.1 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein; Swiss-Prot: sp|Q86KL4|MCTS1_DICDI Malignant T-cell-amplified sequence 1 homolog; TrEMBL-Plants: tr|I3SF98|I3SF98_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0290800 16
TRNA pseudouridine synthase B; TAIR: AT3G57150.1 homologue of NAP57; Swiss-Prot: sp|Q9LD90|CBF5_ARATH H/ACA ribonucleoprotein complex subunit 4; TrEMBL-Plants: tr|V7BUX8|V7BUX8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0350500 26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 16.67