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TIGR01040

Source: TIGRFAM

Description

V-ATPase_V1_B: V-type ATPase, B subunit

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0033180
Cellular component Proton-transporting V-type ATPase, V1 domain A protein complex that forms part of a proton-transporting V-type ATPase and catalyzes ATP hydrolysis. The V1 complex consists of: (1) a globular headpiece with three alternating copies of subunits A and B that form a ring, (2) a central rotational stalk composed of single copies of subunits D and F, and (3) a peripheral stalk made of subunits C, E, G and H. Subunits A and B mediate the hydrolysis of ATP at three reaction sites associated with subunit A.
Subterm of
Part of
GO:1902600
Biological process Proton transmembrane transport The directed movement of a proton across a membrane.
Subterm of

Associated Lotus transcripts 10

Transcript Name Description Predicted domains Domain count
Lj0g3v0302619.2
– PREDICTED: V-type proton ATPase subunit B 1-like [Glycine max] gi|356575458|ref|XP_003555858.1|
Domains
16
Lj5g3v2246070.1
– PREDICTED: V-type proton ATPase subunit B 1-like isoform 1 [Glycine max] gi|356536392|ref|XP_003536722.1|
Domains
17
LotjaGi1g1v0491400.1
– ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|I1NF84|I1NF84_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0491400
Domains
19
LotjaGi1g1v0491400.2
– ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|G7KSI7|G7KSI7_MEDTR Archaeal/vacuolar-type H+-ATPase subunit B; Found in the gene: LotjaGi1g1v0491400
Domains
14
LotjaGi1g1v0491400.3
– ATP synthase subunit beta; TAIR: AT4G38510.1 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|G7KSI7|G7KSI7_MEDTR Archaeal/vacuolar-type H+-ATPase subunit B; Found in the gene: LotjaGi1g1v0491400
Domains
19
LotjaGi1g1v0491400.4
– ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|G7KSI7|G7KSI7_MEDTR Archaeal/vacuolar-type H+-ATPase subunit B; Found in the gene: LotjaGi1g1v0491400
Domains
14
LotjaGi5g1v0350100.1
– ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|I1LF60|I1LF60_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0350100
Domains
19
LotjaGi5g1v0350100.2
– ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|I1LF60|I1LF60_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0350100
Domains
19
LotjaGi5g1v0350100.3
– ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|A0A072VSL4|A0A072VSL4_MEDTR Archaeal/vacuolar-type H+-ATPase subunit B; Found in the gene: LotjaGi5g1v0350100
Domains
14
LotjaGi5g1v0350100.4
– ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|A0A072VSL4|A0A072VSL4_MEDTR Archaeal/vacuolar-type H+-ATPase subunit B; Found in the gene: LotjaGi5g1v0350100
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd18112 CDD 1 10.00