Domain Predictions — View — Lotus Base

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cd01337

Source: CDD

Description

MDH_glyoxysomal_mitochondrial

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 18

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0169339.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: malate dehydrogenase, chloroplastic-like [Glycine max] gi\|356512147\|ref\|XP_003524782.1\|	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR016040 IPR022383 PF00056 PF02866 PS00068 PTHR11540 PTHR11540:SF14 SSF51735 SSF56327 TIGR01772 cd01337	18
Lj0g3v0292959.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase [Medicago truncatula] gi\|357476083\|ref\|XP_003608327.1\|	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR016040 IPR022383 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 PTHR11540:SF21 SSF51735 SSF56327 TIGR01772 cd01337	19
Lj2g3v1984320.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase, glyoxysomal [Medicago truncatula] gi\|357482443\|ref\|XP_003611508.1\|	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR016040 IPR022383 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 PTHR11540:SF27 SSF51735 SSF56327 TIGR01772 cd01337	19
Lj3g3v0428550.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase [Glycine max] gi\|5929964\|gb\|AAD56659.1\|	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR016040 IPR022383 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 SSF51735 SSF56327 TIGR01772 cd01337	18
Lj3g3v0428550.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: malate dehydrogenase, mitochondrial-like [Glycine max] gi\|356517066\|ref\|XP_003527211.1\|	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR016040 IPR022383 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 SSF51735 SSF56327 TIGR01772 cd01337	18
Lj4g3v1635340.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nodule-enhanced malate dehydrogenase [Pisum sativum] gi\|3377762\|gb\|AAC28106.1\|	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR016040 IPR022383 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 PTHR11540:SF14 SSF51735 SSF56327 TIGR01772 cd01337	19
LotjaGi2g1v0413300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase; TAIR: AT2G22780.1 peroxisomal NAD-malate dehydrogenase 1; Swiss-Prot: sp\|P37228\|MDHG_SOYBN Malate dehydrogenase, glyoxysomal; TrEMBL-Plants: tr\|A0A1J7GRW6\|A0A1J7GRW6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0413300	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR022383 IPR036291 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 PTHR11540:SF50 SSF51735 SSF56327 TIGR01772 cd01337	19
LotjaGi2g1v0413300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase; TAIR: AT2G22780.1 peroxisomal NAD-malate dehydrogenase 1; Swiss-Prot: sp\|P37228\|MDHG_SOYBN Malate dehydrogenase, glyoxysomal; TrEMBL-Plants: tr\|A0A1J7GRW6\|A0A1J7GRW6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0413300	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR022383 IPR036291 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 PTHR11540:SF50 SSF51735 SSF56327 TIGR01772 cd01337	19
LotjaGi2g1v0413300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase; TAIR: AT2G22780.1 peroxisomal NAD-malate dehydrogenase 1; Swiss-Prot: sp\|P37228\|MDHG_SOYBN Malate dehydrogenase, glyoxysomal; TrEMBL-Plants: tr\|A0A1J7GRW6\|A0A1J7GRW6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0413300	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR022383 IPR036291 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 PTHR11540:SF52 SSF51735 SSF56327 TIGR01772 cd01337	19
LotjaGi2g1v0413300.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase; TAIR: AT2G22780.1 peroxisomal NAD-malate dehydrogenase 1; Swiss-Prot: sp\|P37228\|MDHG_SOYBN Malate dehydrogenase, glyoxysomal; TrEMBL-Plants: tr\|A0A1J7GRW6\|A0A1J7GRW6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0413300	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR022383 IPR036291 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 PTHR11540:SF52 SSF51735 SSF56327 TIGR01772 cd01337	19
LotjaGi2g1v0413300.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase; TAIR: AT2G22780.1 peroxisomal NAD-malate dehydrogenase 1; Swiss-Prot: sp\|P37228\|MDHG_SOYBN Malate dehydrogenase, glyoxysomal; TrEMBL-Plants: tr\|A0A1J7GRW6\|A0A1J7GRW6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0413300	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR010097 IPR015955 IPR022383 IPR036291 PF00056 PF02866 PS00068 PTHR11540 PTHR11540:SF50 SSF51735 SSF56327 TIGR01772 cd01337	17
LotjaGi3g1v0043100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase; TAIR: AT1G53240.1 Lactate/malate dehydrogenase family protein; Swiss-Prot: sp\|Q9ZP06\|MDHM1_ARATH Malate dehydrogenase 1, mitochondrial; TrEMBL-Plants: tr\|I3T024\|I3T024_LOTJA Malate dehydrogenase; Found in the gene: LotjaGi3g1v0043100	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR022383 IPR036291 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 PTHR11540:SF58 SSF51735 SSF56327 TIGR01772 cd01337	19
LotjaGi4g1v0043100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase; TAIR: AT5G09660.1 peroxisomal NAD-malate dehydrogenase 2; Swiss-Prot: sp\|P19446\|MDHG_CITLA Malate dehydrogenase, glyoxysomal; TrEMBL-Plants: tr\|G7JTZ0\|G7JTZ0_MEDTR Glyoxysomal malate dehydrogenase; Found in the gene: LotjaGi4g1v0043100	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR022383 IPR036291 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 PTHR11540:SF52 SSF51735 SSF56327 TIGR01772 cd01337	19
LotjaGi4g1v0043100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase; TAIR: AT5G09660.1 peroxisomal NAD-malate dehydrogenase 2; Swiss-Prot: sp\|P19446\|MDHG_CITLA Malate dehydrogenase, glyoxysomal; TrEMBL-Plants: tr\|G7JTZ0\|G7JTZ0_MEDTR Glyoxysomal malate dehydrogenase; Found in the gene: LotjaGi4g1v0043100	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR022383 IPR036291 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 PTHR11540:SF52 SSF51735 SSF56327 TIGR01772 cd01337	19
LotjaGi4g1v0043100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase; TAIR: AT5G09660.1 peroxisomal NAD-malate dehydrogenase 2; Swiss-Prot: sp\|P19446\|MDHG_CITLA Malate dehydrogenase, glyoxysomal; TrEMBL-Plants: tr\|G7JTZ0\|G7JTZ0_MEDTR Glyoxysomal malate dehydrogenase; Found in the gene: LotjaGi4g1v0043100	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR022383 IPR036291 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 PTHR11540:SF52 SSF51735 SSF56327 TIGR01772 cd01337	19
LotjaGi4g1v0043100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase; TAIR: AT5G09660.1 peroxisomal NAD-malate dehydrogenase 2; Swiss-Prot: sp\|P19446\|MDHG_CITLA Malate dehydrogenase, glyoxysomal; TrEMBL-Plants: tr\|G7JTZ0\|G7JTZ0_MEDTR Glyoxysomal malate dehydrogenase; Found in the gene: LotjaGi4g1v0043100	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR001557 IPR010097 IPR015955 IPR022383 IPR036291 PF00056 PF02866 PIRSF000102 PS00068 PTHR11540 PTHR11540:SF52 SSF51735 SSF56327 TIGR01772 cd01337	19
LotjaGi4g1v0249500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase; TAIR: AT3G47520.1 malate dehydrogenase; Swiss-Prot: sp\|Q9SN86\|MDHP_ARATH Malate dehydrogenase, chloroplastic; TrEMBL-Plants: tr\|I3SFA8\|I3SFA8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0249500	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR010097 IPR015955 IPR022383 IPR036291 PF00056 PF02866 PS00068 PTHR11540 PTHR11540:SF56 SSF51735 SSF56327 TIGR01772 cd01337	17
LotjaGi4g1v0249500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Malate dehydrogenase; TAIR: AT3G47520.1 malate dehydrogenase; Swiss-Prot: sp\|Q9SN86\|MDHP_ARATH Malate dehydrogenase, chloroplastic; TrEMBL-Plants: tr\|I3SFA8\|I3SFA8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0249500	Domains G3DSA:3.40.50.720 G3DSA:3.90.110.10 IPR001236 IPR001252 IPR010097 IPR015955 IPR022383 IPR036291 PF00056 PF02866 PS00068 PTHR11540 PTHR11540:SF56 SSF51735 SSF56327 TIGR01772 cd01337	17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd01337	CDD	1	5.56