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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0088800 |
| Transcript ID | LotjaGi3g1v0088800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp|Q9SH30|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr|G7LF66|G7LF66_MEDTR Heavy metal P-type ATPase; Found in the gene: LotjaGi3g1v0088800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:10057142..10063451) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAAACGACGACGTTAAGATACCCTTGTTGCAACCACCACCACCACCACCACCACAAGACGCCGCCACCATTAAGAC AGTTACGTTCCGAATAACTGACATCAAGTGCGCCTCTTGTGTCAATTCCATCGAATCCGCACTTAAAACCCTCGCCGGCA TCAAAACCGTCGCGGTCTCGCCGCTCGATGGCCGCGCCGCCATCAAATTCGAACCCAACTTAATAACCGTAAGTCATACT TTTATTCATATTTTCATTTTAAATTTTGATGTTTTTTAAATTTGATGAGGTATGGATGTAATATTGTAGGTGAAAAGGAT AAAAGAGAGCATAGAGGAAACTGGATTTAAAGTTGATGAGGTTTATGACGACGAGCAAGAGATATCGGTGTGCCGAGTTA GGATTAAAGGGATGGCGTGCACGAGCTGTTCTGAGTCTATTGAGAATGCTCTCCAAATGGTTGATGGGGTGAAAAGGGCG ATAGTTGGTCTGGCTTTAGAGGAGGCGAAAGTGCACTTTGATCCTAGCGTTACCGGTGCGGACAAGATAATCGAAGCGGT AGAAGATGCAGGGTTTGGAGCTGAGCTTATTAGCTCCGGGAATGATATGAACAAGGTGCATTTACTGCTCGAAGGGGTTG ATTCGGAAGAAGATGCTAATGTTCTCGCGGCTTCTCTTGAGTTAGCTGCAGGGGTGAATCGTGTTGAGATGGATTTTTCG GAGCGTAGAGTTATAATTAGCTATGAGCCTGACGTTACCGGTCCGAGATATCTCATTGAGTGTGTTAAGGCTGCTAGTCG CGGCACCAAGATTTATGGAGCAACTTTGTATTCGCCTTCTGGACAAAGAGAAAGGGATAAAGTGAATGAAATTCGTGTGT ATAGGGACCAATTTTTGTTCAGCTGCTTGTTTTCTGTTCCGGTGTTCGTGTTTGCCATGGTGCTTCCCATGCTTCCTCCG TATGGCAACTGGTTAAATTATAGAATCCATAACATGCTTACTCTTGGGTTGTTTTTAAGATGGATCCTTTGCACGCCCGT ACAGTTCATTGTTGGCAAAAGGTACTATTTTTATTAATGACTGTTTAATTCGAGTTTGTTGTTACTGTTCTATTAGTTGA TAGCAGGAAGATGGGTTGTGTTGTATCAATTTTATAAATCGATTTTTTTATAATCATTTTACTATGGCTATTATTATTAG GTTCTATGTGGGGTCATATCATGCACTGAGGAGAAGATCTGCTAACATGGATGTGCTGGTTGCACTAGGCACTAATGCTG CTTATTTTTACTCATTGTATATTGTAATAAAAGCACTGACTTCAGATACCTTTGAAGGACAAGATTTCTTTGAGACCAGT TCCATGTTGATATCCTTTATTCTATTAGGGAAGTATTTGGAGATGGTGGCTAAAGGAAAAACATCAGATGCTTTAGGAAA GCTGACTCAACTTGTTCCTGATAAAGCTTATTTGGTAATAATTGATGCTGATGGAAATGTCATCACGGAAACAGAAATTG AAACTCAACTTATACAAAAGAATGACATAATTAAGATTGTTCCTGGGGCCAAAATTCCCATTGATGGGGTTGTTATTAAA GGGCATAGCTATGCGAATGAAAGTATGATCACTGGGGAAGCAAAACCTGTTGATAAAAGTCCAGGAGACAAGGTATTATT CATGTGCTAGGACTCATAGTTGCTAGTTTTTTTTATTAGGGATTAGAGAGAAGAACAGCAGAAATAATCCAACAAGTTAG GGACAAAAATGATAAAACATTAATGCAGGTGAGTGTTGATGTTGTAGGGGAAGAGCTCCAAGACAAATAGGAATGTCTAT CCACTGGTGAAAGTGAAACCAACATGTGAGAGAGTGGATTATTCTGTCATGTGTATATGTGCACATGCTGGATTCAGGAG GTTGATATCTTTCTTTTTCTTTTCTTGGCAAAGGGGATGTAGGAAAATGTGTGTCATCTTAATTCCTCCAAGTTCTAGTG TTTCAAATTCGTGTAAATGTGACATAATAGAGTGGTGAGAACATTTAACATTTCTCTAAATCTGCTGGACAGGTTATCAG TGGAACCATCAATGAGAATGGCTGCATAGTAGTTAAAGCCACACATGTTGGATCAGACACTGCACTTTCTCAAATTGTTC AACTAGTAGAAGCTGCTCAACTTGCCAAAGCACCAGTTCAAAAACTTGCAGACCATATTTCAAGGGTTTTTGTTCCAATA GTGAGTATTTTTCCCCTTTATTTGTACTTTTTAAGTGTTAATTGATGCATGGAATTGAATTTGGAATTGAGCCTTTGAAT TGGTGTTTAGACCGAAATAGGAATTTTAATTCTCCTGAAGTGAAATTTAACTATTACCTTCTGCATCCTGAAACTATCAC TGCTGGTAGGTCCTCCCACCCCACCTTTGGTAGCATCCTGTAACTGCTACCGACCATAGCCATTACCAAACCATGGTTAC AAGAATCCTCTAACTATCATCACTACCAGTATCCTCCAATAGTGTGTTTGGATTTCGTTGAACACAATGCCGATCCACAT TAAACCCAACATGGAAAAGTCTTGTTTCAACGCAAACGAGAAACAAACACTCACTTAGTCATCATCATCCTATAACAGAA TCCCAATTCAATTTAGAAATTTTCGTTCTATATCTTGATTTTTTATTTGTTTCAAATGTTATAATTTTCTTGATTCTTGG TCAATTCCAATTTTAATAGAATTCAACTTGAAATTAGGATTCGAAACTATGATTTTGGTTATATTGTCCAAACAGACCCT TACTTTTATAGTTTTTGTCAAGAAAATAAGGTTTTATCCAAGAGTAGTGCCTTAATGTGACTAAAGGGTTTGCTAATATA CTCCTATTTGGTTTTTAGAAGCAGTCTGCTGTTAACCTATTCCTTCGAGAGTATATTAACAAATTTCAAGTTGTAATATA TACAGAGAGACTGAACTTGTATATGGTGATTATGGAGAACAAACTACTCCAGAGATAAGCATATTTTGGATGGGAATTTT TTTTACTCAGTGATCACGAAAGGGGGTTTTTCTTTCTTTTTTGTTTCCATCTTGCATGTGGCATGCACATAATAATTTTG ATCACTCTAGTTTTGGGTTATAGGAATTATGCTCCATGTAGATGCATTTAAGACATAATGACATGTGCCATCAGTTCTGT AGTTATTTTTCTTGCCTCATCTTTGTTTATATGCTAATTTTATGAAGAGATGATAAAGGTCCTGCATTATCTTATCTCTT ATCTGCATTGCAACAATATTTTAGCATGGGAAGCTGCTTAGCTTGTATTTGCTTCCTTAGGTGGTTGTTGTGGCACTCTT AACTTGGTTGGGATGGCTCATTCCTGGAGAAGCTGGTATTTACCCTAAACATTGGATTCCAAAAGGCATGGATGCATTTG AGCTTGCTTTGCAGTTTGCTATTTCTGTGCTAGTTGTTGCATGCCCATGTGCTCTGGGCCTAGCAACACCAACTGCAGTC ATGGTTGCTTCAGGAATTGGTGCTTCTCAAGGGGTGCTCATCAAGGGTGGAGATGCCCTGGAAAAGGCACACAAGGTATT TATATTTCTTTTTCTTGTTACTCCATATCTTGAGTTATAATATGTAAGTTGTGCTCGCTTTAAGAGAGTAATCCATGTAA ACCTTCGTTGAATTTTTCCTTATTATATTTGAACTGTTTGGAAGATGATACTAGATTGTAAGGTAAACAACTATAAAAAT GCCTGCAGTTATTTGTGACAACCCTTAGACTGCAAGGTAATAAACCACGTATTGTAGGGCCAACTTCTTGATTTTTCCCT TGTTTCAGCATTCTGATTTTGTTGTTGTAAAATACTAAAACCTCTACTATTAGCCTTTTCTGTCGTTTGGTGATGCAGTT CTTTCCGTTTATCCTCGACTCAGCCCGATTACTCTGATAAATAAAGTGCATATTTTCTGAAGCAAGGTCAAAAAAATTGA CAGCACTTAGACTTTTGTTCATACTTCATAGGTTCTGCTGTCATGCAATCAGGACTGCTTTAAAATCATCACCGAAGGCA TACCTTTTGGTACTTTTCATTGTATCAGTGAAATTCATGTTTCACGCATAACATAGTATAGGTTATCAAGTATTTATTTG ATGTTAGCATGCTACATATTCCCTATGTTTTCAGTATTTTTAAAATTGAAATCTTGTTCTTTGTTCCTGATGCAGGTAAC AGTTGTTGTGTTTGATAAGACAGGGACGCTAACAGTAGGGAAGCCAGTGGTAGTTAGTGCAGTGCTGTTTTCTGAATTTT CCATGGAGGAGTTATGTGACATGGCGATTGCTGTTGAGGTTTTCTTTCTTTCTTTTGTTGCATACTGTTCTCTTAGTGAT ACCTGAATGTTTCATTACTGATTTTACTCACATTAACATTCTTAGAACCCTTGCAAAAGATATTGAAGCGTATAAAACAA GAAACTGAATCTAGTTTTTTTTACCGAAGAAATTTTTGGTTTTATCTCAGGCAAGAATGTTGGCTTGGGTGGATTTCAAG TGATTTATTTTAAAATAGATGCCAAATAAATAAACATAAAAAACAAATAGCAATACCGTTTTGCCTTTCATTTAAGAGAT CTGGAAAAAATTATGAAGTGGTCCCCAGATGTTTATATTGTTTTTGTTTATAGAGATGTCAGATGAAAAACAAAAAGAAT ATTAAAGTGATATTTTTCCAAATATCTTAGCTTAATTTCTCCATGATATCTAAGGTAATTATTTCTACAAATATTTAGGG AAGTAGCGAACACCCACTAGCAAAAGCTGTTGTGACACATGCAAAGAGCCTGCGACCGAAATTTGGTTCCTGCAATGAGG AAGTCCCGGATGTGAATGATTTTGAGGTACATATGGGAGCTGGGGTAAGTGGAAAGGTTGGTGATACGACTGTTTTAGTT GGAAACAAGAGACTGATGCATGCTTGTAATGTTCCAATATCTTCCGAGGTGGAGAAGTACATCTCTGAAAATGAAATTCT GGCTAGAACATGTGTTTTAGTTTCCATTAACGGAAAGATAGCTGGAGCATTCTCTGTAACTGATCCTGTAAAGCCAGAGG CTAAACGTGTCATATCATATCTACACTCCATGGGAATCTCAAGCATCATAGTAACTGGTGATAACCGTGCTACTGCAACT GCTATTGCAAAGGAAGTCGGTATTGATAAGGTCTTTGCTGAGACAGATCCACTTGGCAAAGCTGATAGGGTGAAAGACTT GCAGGTAAGTTTTATAAGCCAATCTAGCTTATTTGAAATTCATGCAAATAGCCAGTTTTTTAGGGCATATTTACTTTCCA TTTTTCCTGCCTATTTTCATTTCCTATTTAGTTTTAATTGCAACATGCCCATTATATTTATTTTATTTCCTGTTTTCGAA GTTTTTTGTTGGAAATGGTGGAACCCGTTTGGATGCAAACAAAGAGCACTTTTGAAACTTTTTTAGTCCTTTTTAGTAGA TAAGCTACAATACGTTCCAATGTTCTGTTTGGAAGAGTTTATTTAAGCTTATCTTATAGCATAAGCGCTTATGCAAGTGT TTGAGAGAGCTTATGTAAACAGCTTATAGTCGACCTGACCTATAAGCTGTTTGCAACTTATTTTCATAACCTGTTCAGAT TAGCTTATGAGTAAGAACTTATGCTTACGTATAACCCATTTTCAGCTTATTTCAAAACTTTTTCAAATTAGCTTATGAAT AAACGCTTATTGCCATAAGCGCTTAACTAAGTTTACCCAAACACGCCCTATGTCTGTGTCCAAACAGGCTCATAATCACA TATGAAAGCCCTTAGATCAAATATTTATGAAAAATATGTTATCATTTTCTGATTTTTGAAATTGACACTGGATGCAGGGG AAGGGAATGATTGTGGCAATGGTGGGTGATGGAATAAATGACTCGCCAGCCTTAGTTGCTGCTGATGTTGGCATGGCAAT TGGTGCCGGAACTGACGTAGCTATAGAAGCAGCTGATATAGTTCTAGTCAAAAGCAGTTTAGCAGATGTTATTACCGCCA TAGATCTATCTAGAAAAACCATGTCTCGTATCCGATTGAACTACATCTGGGCTCTTGGTTACAACATTCTAGGAATGCCA ATTGCTGCTGGTGTCTTATACCCGTTTACTGGAATCAGATTGCCACCATGGCTTGCTGGTGCATGCATGGCTGCTTCTTC TCTTAGTGTGGTTTCTTCGTCTCTTCTGCTGCAGTTCTATAAAAAACCTTTGCATGTAGAATCCATGTAA
CDS sequence (LotjaGi3g1v0088800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAACGACGACGTTAAGATACCCTTGTTGCAACCACCACCACCACCACCACCACAAGACGCCGCCACCATTAAGAC AGTTACGTTCCGAATAACTGACATCAAGTGCGCCTCTTGTGTCAATTCCATCGAATCCGCACTTAAAACCCTCGCCGGCA TCAAAACCGTCGCGGTCTCGCCGCTCGATGGCCGCGCCGCCATCAAATTCGAACCCAACTTAATAACCGTGAAAAGGATA AAAGAGAGCATAGAGGAAACTGGATTTAAAGTTGATGAGGTTTATGACGACGAGCAAGAGATATCGGTGTGCCGAGTTAG GATTAAAGGGATGGCGTGCACGAGCTGTTCTGAGTCTATTGAGAATGCTCTCCAAATGGTTGATGGGGTGAAAAGGGCGA TAGTTGGTCTGGCTTTAGAGGAGGCGAAAGTGCACTTTGATCCTAGCGTTACCGGTGCGGACAAGATAATCGAAGCGGTA GAAGATGCAGGGTTTGGAGCTGAGCTTATTAGCTCCGGGAATGATATGAACAAGGTGCATTTACTGCTCGAAGGGGTTGA TTCGGAAGAAGATGCTAATGTTCTCGCGGCTTCTCTTGAGTTAGCTGCAGGGGTGAATCGTGTTGAGATGGATTTTTCGG AGCGTAGAGTTATAATTAGCTATGAGCCTGACGTTACCGGTCCGAGATATCTCATTGAGTGTGTTAAGGCTGCTAGTCGC GGCACCAAGATTTATGGAGCAACTTTGTATTCGCCTTCTGGACAAAGAGAAAGGGATAAAGTGAATGAAATTCGTGTGTA TAGGGACCAATTTTTGTTCAGCTGCTTGTTTTCTGTTCCGGTGTTCGTGTTTGCCATGGTGCTTCCCATGCTTCCTCCGT ATGGCAACTGGTTAAATTATAGAATCCATAACATGCTTACTCTTGGGTTGTTTTTAAGATGGATCCTTTGCACGCCCGTA CAGTTCATTGTTGGCAAAAGGTTCTATGTGGGGTCATATCATGCACTGAGGAGAAGATCTGCTAACATGGATGTGCTGGT TGCACTAGGCACTAATGCTGCTTATTTTTACTCATTGTATATTGTAATAAAAGCACTGACTTCAGATACCTTTGAAGGAC AAGATTTCTTTGAGACCAGTTCCATGTTGATATCCTTTATTCTATTAGGGAAGTATTTGGAGATGGTGGCTAAAGGAAAA ACATCAGATGCTTTAGGAAAGCTGACTCAACTTGTTCCTGATAAAGCTTATTTGGTAATAATTGATGCTGATGGAAATGT CATCACGGAAACAGAAATTGAAACTCAACTTATACAAAAGAATGACATAATTAAGATTGTTCCTGGGGCCAAAATTCCCA TTGATGGGGTTGTTATTAAAGGGCATAGCTATGCGAATGAAAGTATGATCACTGGGGAAGCAAAACCTGTTGATAAAAGT CCAGGAGACAAGGTTATCAGTGGAACCATCAATGAGAATGGCTGCATAGTAGTTAAAGCCACACATGTTGGATCAGACAC TGCACTTTCTCAAATTGTTCAACTAGTAGAAGCTGCTCAACTTGCCAAAGCACCAGTTCAAAAACTTGCAGACCATATTT CAAGGGTTTTTGTTCCAATAGTGGTTGTTGTGGCACTCTTAACTTGGTTGGGATGGCTCATTCCTGGAGAAGCTGGTATT TACCCTAAACATTGGATTCCAAAAGGCATGGATGCATTTGAGCTTGCTTTGCAGTTTGCTATTTCTGTGCTAGTTGTTGC ATGCCCATGTGCTCTGGGCCTAGCAACACCAACTGCAGTCATGGTTGCTTCAGGAATTGGTGCTTCTCAAGGGGTGCTCA TCAAGGGTGGAGATGCCCTGGAAAAGGCACACAAGGTAACAGTTGTTGTGTTTGATAAGACAGGGACGCTAACAGTAGGG AAGCCAGTGGTAGTTAGTGCAGTGCTGTTTTCTGAATTTTCCATGGAGGAGTTATGTGACATGGCGATTGCTGTTGAGGG AAGTAGCGAACACCCACTAGCAAAAGCTGTTGTGACACATGCAAAGAGCCTGCGACCGAAATTTGGTTCCTGCAATGAGG AAGTCCCGGATGTGAATGATTTTGAGGTACATATGGGAGCTGGGGTAAGTGGAAAGGTTGGTGATACGACTGTTTTAGTT GGAAACAAGAGACTGATGCATGCTTGTAATGTTCCAATATCTTCCGAGGTGGAGAAGTACATCTCTGAAAATGAAATTCT GGCTAGAACATGTGTTTTAGTTTCCATTAACGGAAAGATAGCTGGAGCATTCTCTGTAACTGATCCTGTAAAGCCAGAGG CTAAACGTGTCATATCATATCTACACTCCATGGGAATCTCAAGCATCATAGTAACTGGTGATAACCGTGCTACTGCAACT GCTATTGCAAAGGAAGTCGGTATTGATAAGGTCTTTGCTGAGACAGATCCACTTGGCAAAGCTGATAGGGTGAAAGACTT GCAGGGGAAGGGAATGATTGTGGCAATGGTGGGTGATGGAATAAATGACTCGCCAGCCTTAGTTGCTGCTGATGTTGGCA TGGCAATTGGTGCCGGAACTGACGTAGCTATAGAAGCAGCTGATATAGTTCTAGTCAAAAGCAGTTTAGCAGATGTTATT ACCGCCATAGATCTATCTAGAAAAACCATGTCTCGTATCCGATTGAACTACATCTGGGCTCTTGGTTACAACATTCTAGG AATGCCAATTGCTGCTGGTGTCTTATACCCGTTTACTGGAATCAGATTGCCACCATGGCTTGCTGGTGCATGCATGGCTG CTTCTTCTCTTAGTGTGGTTTCTTCGTCTCTTCTGCTGCAGTTCTATAAAAAACCTTTGCATGTAGAATCCATGTAA
Protein sequence (LotjaGi3g1v0088800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENDDVKIPLLQPPPPPPPQDAATIKTVTFRITDIKCASCVNSIESALKTLAGIKTVAVSPLDGRAAIKFEPNLITVKRI KESIEETGFKVDEVYDDEQEISVCRVRIKGMACTSCSESIENALQMVDGVKRAIVGLALEEAKVHFDPSVTGADKIIEAV EDAGFGAELISSGNDMNKVHLLLEGVDSEEDANVLAASLELAAGVNRVEMDFSERRVIISYEPDVTGPRYLIECVKAASR GTKIYGATLYSPSGQRERDKVNEIRVYRDQFLFSCLFSVPVFVFAMVLPMLPPYGNWLNYRIHNMLTLGLFLRWILCTPV QFIVGKRFYVGSYHALRRRSANMDVLVALGTNAAYFYSLYIVIKALTSDTFEGQDFFETSSMLISFILLGKYLEMVAKGK TSDALGKLTQLVPDKAYLVIIDADGNVITETEIETQLIQKNDIIKIVPGAKIPIDGVVIKGHSYANESMITGEAKPVDKS PGDKVISGTINENGCIVVKATHVGSDTALSQIVQLVEAAQLAKAPVQKLADHISRVFVPIVVVVALLTWLGWLIPGEAGI YPKHWIPKGMDAFELALQFAISVLVVACPCALGLATPTAVMVASGIGASQGVLIKGGDALEKAHKVTVVVFDKTGTLTVG KPVVVSAVLFSEFSMEELCDMAIAVEGSSEHPLAKAVVTHAKSLRPKFGSCNEEVPDVNDFEVHMGAGVSGKVGDTTVLV GNKRLMHACNVPISSEVEKYISENEILARTCVLVSINGKIAGAFSVTDPVKPEAKRVISYLHSMGISSIIVTGDNRATAT AIAKEVGIDKVFAETDPLGKADRVKDLQGKGMIVAMVGDGINDSPALVAADVGMAIGAGTDVAIEAADIVLVKSSLADVI TAIDLSRKTMSRIRLNYIWALGYNILGMPIAAGVLYPFTGIRLPPWLAGACMAASSLSVVSSSLLLQFYKKPLHVESM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 270 | 270 | - | – | |
| MobiDBLite | 1 | 20 | 20 | - | – | |
| Gene3D | 20 | 93 | 74 | 3.2E-19 | – | |
| SUPERFAMILY | 24 | 92 | 69 | 1.18E-15 | ||
| ProSiteProfiles | 27 | 93 | 67 | 18.821 | ||
| TIGRFAM | 28 | 91 | 64 | 6.0E-9 | ||
| Pfam | 29 | 90 | 62 | 1.7E-12 | ||
| CDD | 29 | 91 | 63 | 6.00296E-12 | ||
| ProSitePatterns | 32 | 60 | 29 | - | ||
| PANTHER | 44 | 957 | 914 | 0.0 | – | |
| PANTHER | 44 | 957 | 914 | 0.0 | – | |
| Gene3D | 100 | 179 | 80 | 2.5E-20 | – | |
| SUPERFAMILY | 101 | 173 | 73 | 1.3E-17 | ||
| ProSiteProfiles | 103 | 169 | 67 | 21.212 | ||
| Pfam | 105 | 165 | 61 | 8.0E-10 | ||
| CDD | 106 | 168 | 63 | 6.14211E-15 | ||
| TIGRFAM | 106 | 166 | 61 | 3.9E-10 | ||
| ProSitePatterns | 108 | 137 | 30 | - | ||
| SUPERFAMILY | 173 | 244 | 72 | 1.96E-6 | ||
| ProSiteProfiles | 178 | 244 | 67 | 9.572 | ||
| TMHMM | 270 | 292 | 23 | - | – | |
| Phobius | 271 | 290 | 20 | - | – | |
| CDD | 271 | 933 | 663 | 0.0 | – | |
| Phobius | 291 | 301 | 11 | - | – | |
| Phobius | 302 | 324 | 23 | - | – | |
| TMHMM | 302 | 324 | 23 | - | – | |
| Phobius | 325 | 344 | 20 | - | – | |
| TIGRFAM | 343 | 946 | 604 | 4.8E-190 | ||
| Phobius | 345 | 363 | 19 | - | – | |
| TMHMM | 345 | 363 | 19 | - | – | |
| Phobius | 364 | 374 | 11 | - | – | |
| Phobius | 375 | 393 | 19 | - | – | |
| SUPERFAMILY | 375 | 623 | 249 | 3.01E-11 | ||
| TMHMM | 376 | 393 | 18 | - | – | |
| TIGRFAM | 383 | 914 | 532 | 2.2E-77 | ||
| Phobius | 394 | 535 | 142 | - | – | |
| Gene3D | 398 | 520 | 123 | 6.5E-42 | – | |
| Pfam | 418 | 607 | 190 | 6.9E-49 | – | |
| SUPERFAMILY | 430 | 516 | 87 | 4.18E-22 | ||
| PRINTS | 466 | 480 | 15 | 5.9E-28 | – | |
| TMHMM | 533 | 555 | 23 | - | – | |
| Phobius | 536 | 555 | 20 | - | – | |
| Phobius | 556 | 574 | 19 | - | – | |
| TMHMM | 575 | 597 | 23 | - | – | |
| Phobius | 575 | 595 | 21 | - | – | |
| Phobius | 596 | 896 | 301 | - | – | |
| Gene3D | 611 | 889 | 279 | 1.1E-92 | ||
| SFLD | 612 | 889 | 278 | 0.0 | – | |
| SFLD | 612 | 889 | 278 | 0.0 | – | |
| Pfam | 627 | 851 | 225 | 6.3E-44 | – | |
| SUPERFAMILY | 628 | 943 | 316 | 6.19E-57 | ||
| PRINTS | 630 | 644 | 15 | 5.9E-28 | – | |
| ProSitePatterns | 632 | 638 | 7 | - | ||
| Gene3D | 641 | 769 | 129 | 1.1E-92 | ||
| PRINTS | 762 | 773 | 12 | 5.9E-28 | – | |
| PRINTS | 784 | 794 | 11 | 5.9E-28 | – | |
| PRINTS | 837 | 856 | 20 | 5.9E-28 | – | |
| PRINTS | 837 | 853 | 17 | 5.3E-9 | ||
| PRINTS | 860 | 872 | 13 | 5.9E-28 | – | |
| PRINTS | 868 | 893 | 26 | 5.3E-9 | ||
| Phobius | 897 | 919 | 23 | - | – | |
| TMHMM | 897 | 916 | 20 | - | – | |
| Phobius | 920 | 924 | 5 | - | – | |
| Phobius | 925 | 949 | 25 | - | – | |
| TMHMM | 926 | 948 | 23 | - | – | |
| Phobius | 950 | 958 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Copper ion binding | Interacting selectively and non-covalently with copper (Cu) ions. | ||
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Cation-transporting ATPase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in). | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi3g1v0088800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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