Domain Predictions — View

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cd02879

Source: CDD

Description

GH18_plant_chitinase_class_V

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 9

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0362579.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: chitotriosidase-1-like [Glycine max] gi\|356556606\|ref\|XP_003546615.1\|	Domains G3DSA:3.10.50.10 G3DSA:3.20.20.80 IPR001223 IPR011583 IPR013781 IPR017853 IPR029070 NON_CYTOPLASMIC_DOMAIN PF00704 PTHR11177 PTHR11177:SF219 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00636 SSF51445 SSF54556 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TMhelix cd02879	23
Lj6g3v1078650.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: acidic mammalian chitinase-like [Cicer arietinum] gi\|502131776\|ref\|XP_004501097.1\|	Domains G3DSA:3.20.20.80 IPR001223 IPR011583 IPR013781 IPR017853 IPR029070 NON_CYTOPLASMIC_DOMAIN PF00704 PTHR11177 PTHR11177:SF219 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00636 SSF51445 SSF54556 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix cd02879	21
Lj6g3v1078660.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.20.20.80 IPR001223 IPR011583 IPR013781 IPR017853 IPR029070 NON_CYTOPLASMIC_DOMAIN PF00704 PTHR11177 PTHR11177:SF219 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00636 SSF51445 SSF54556 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix cd02879	21
LotjaGi4g1v0284200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chitinase; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp\|Q91XA9\|CHIA_MOUSE Acidic mammalian chitinase; TrEMBL-Plants: tr\|A0A1B1J8W5\|A0A1B1J8W5_MEDTR Class V chitinase b protein; Found in the gene: LotjaGi4g1v0284200	Domains G3DSA:3.10.50.10 G3DSA:3.20.20.80 IPR001223 IPR001579 IPR011583 IPR017853 IPR029070 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR11177 PTHR11177:SF339 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00636 SSF51445 SSF54556 SignalP-noTM cd02879	21
LotjaGi4g1v0284300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Receptor protein kinase, putative; TAIR: AT4G23200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 12; Swiss-Prot: sp\|O65472\|CRK12_ARATH Putative cysteine-rich receptor-like protein kinase 12; TrEMBL-Plants: tr\|A0A072US50\|A0A072US50_MEDTR Cysteine-rich RLK (Receptor-like kinase) protein; Found in the gene: LotjaGi4g1v0284300	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.510.10 G3DSA:3.10.50.10 G3DSA:3.20.20.80 G3DSA:3.30.200.20 IPR000719 IPR001223 IPR008271 IPR011009 IPR011583 IPR017441 IPR017853 IPR029070 NON_CYTOPLASMIC_DOMAIN PF00069 PF00704 PS00107 PS00108 PS50011 PTHR11177 PTHR11177:SF357 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00220 SM00636 SSF51445 SSF56112 SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE cd02879 cd14066 mobidb-lite	36
LotjaGi4g1v0284600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Receptor protein kinase, putative; TAIR: AT1G11330.1 S-locus lectin protein kinase family protein; Swiss-Prot: sp\|Q9SXB8\|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330; TrEMBL-Plants: tr\|A0A151QSL2\|A0A151QSL2_CAJCA Cysteine-rich receptor-like protein kinase 10; Found in the gene: LotjaGi4g1v0284600	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.510.10 G3DSA:3.10.50.10 G3DSA:3.20.20.80 G3DSA:3.30.200.20 IPR000719 IPR001223 IPR001245 IPR008271 IPR011009 IPR011583 IPR017853 IPR029070 NON_CYTOPLASMIC_DOMAIN PF00704 PF07714 PS00108 PS50011 PTHR11177 PTHR11177:SF357 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00220 SM00636 SSF51445 SSF54556 SSF56112 SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE cd02879 cd14066	35
LotjaGi4g1v0284700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chitinase, putative; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp\|Q13231\|CHIT1_HUMAN Chitotriosidase-1; TrEMBL-Plants: tr\|A0A1J7GHK5\|A0A1J7GHK5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0284700	Domains G3DSA:3.10.50.10 G3DSA:3.20.20.80 IPR001223 IPR011583 IPR017853 IPR029070 NON_CYTOPLASMIC_DOMAIN PF00704 PTHR11177 PTHR11177:SF352 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00636 SSF51445 SSF54556 SignalP-TM SignalP-noTM TMhelix cd02879	21
LotjaGi5g1v0054800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chitinase, putative; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp\|Q13231\|CHIT1_HUMAN Chitotriosidase-1; TrEMBL-Plants: tr\|A0A1B1J8Z2\|A0A1B1J8Z2_LOTJA Class V chitinase protein; Found in the gene: LotjaGi5g1v0054800	Domains G3DSA:3.10.50.10 G3DSA:3.20.20.80 IPR001223 IPR001579 IPR011583 IPR017853 IPR029070 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR11177 PTHR11177:SF348 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00636 SSF51445 SSF54556 SignalP-TM cd02879	21
LotjaGi6g1v0206300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chitinase; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp\|Q13231\|CHIT1_HUMAN Chitotriosidase-1; TrEMBL-Plants: tr\|I3S8H4\|I3S8H4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0206300	Domains G3DSA:3.10.50.10 G3DSA:3.20.20.80 IPR001223 IPR011583 IPR017853 IPR029070 NON_CYTOPLASMIC_DOMAIN PF00704 PTHR11177 PTHR11177:SF352 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00636 SSF51445 SSF54556 SignalP-TM SignalP-noTM TMhelix cd02879	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd02879	CDD	1	11.11