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IPR029070 is a Chitinase insertion domain superfamily.
<p>This superfamily represents the chitinase insertion domain (CID) that is found in chitinases or chitinase-like proteins. It is composed of five or six anti-parallel β-strands and one α-helix and it inserts between the seventh α-helix and seventh β-strand of the TIM barrel [[cite:PUB00069791]]. The CID domain forms a wall alongside the TIM barrel substrate-binding cleft of chitinase which increases the depth of the cleft. Family 18 chitinases (also known as glycosyl hydrolase 18 family) can be classified into three subfamilies: A, B, and C. The CID domain can be found in the subfamily A, but is absent in the subfamily B [[cite:PUB00069791]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: chitotriosidase-1-like [Glycine max] gi|356556606|ref|XP_003546615.1| | 23 | ||
| – | 21 | |||
| – | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera] gi|359497026|ref|XP_003635401.1| | 29 | ||
| – | PREDICTED: chitotriosidase-1-like [Cicer arietinum] gi|502125066|ref|XP_004498784.1| | 15 | ||
| – | PREDICTED: acidic mammalian chitinase-like [Glycine max] gi|356563922|ref|XP_003550206.1| | 13 | ||
| – | PREDICTED: acidic mammalian chitinase-like [Glycine max] gi|356563922|ref|XP_003550206.1| | 11 | ||
| – | PREDICTED: acidic mammalian chitinase-like [Cicer arietinum] gi|502131776|ref|XP_004501097.1| | 21 | ||
| – | 21 | |||
| – | Chitinase domain-containing protein 1; TAIR: AT4G01040.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q66IL0|CHID1_XENTR Chitinase domain-containing protein 1; TrEMBL-Plants: tr|G7K407|G7K407_MEDTR Glycoside hydrolase family 18 protein; Found in the gene: LotjaGi1g1v0635600 | 17 | ||
| – | Chitinase domain-containing protein 1; TAIR: AT4G01040.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q922Q9|CHID1_MOUSE Chitinase domain-containing protein 1; TrEMBL-Plants: tr|K7KH31|K7KH31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0635600 | 9 | ||
| – | Chitinase domain-containing protein 1; TAIR: AT4G01040.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q68EX9|CHID1_XENLA Chitinase domain-containing protein 1; TrEMBL-Plants: tr|K7KH31|K7KH31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0635600 | 9 | ||
| – | Chitinase; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase; TrEMBL-Plants: tr|A0A1B1J8W5|A0A1B1J8W5_MEDTR Class V chitinase b protein; Found in the gene: LotjaGi4g1v0284200 | 21 | ||
| – | Receptor protein kinase, putative; TAIR: AT4G23200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 12; Swiss-Prot: sp|O65472|CRK12_ARATH Putative cysteine-rich receptor-like protein kinase 12; TrEMBL-Plants: tr|A0A072US50|A0A072US50_MEDTR Cysteine-rich RLK (Receptor-like kinase) protein; Found in the gene: LotjaGi4g1v0284300 | 36 | ||
| – | Receptor protein kinase, putative; TAIR: AT1G11330.1 S-locus lectin protein kinase family protein; Swiss-Prot: sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330; TrEMBL-Plants: tr|A0A151QSL2|A0A151QSL2_CAJCA Cysteine-rich receptor-like protein kinase 10; Found in the gene: LotjaGi4g1v0284600 | 35 | ||
| – | Chitinase, putative; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp|Q13231|CHIT1_HUMAN Chitotriosidase-1; TrEMBL-Plants: tr|A0A1J7GHK5|A0A1J7GHK5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0284700 | 21 | ||
| – | Chitinase; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp|Q9W5U2|CHIT3_DROME Probable chitinase 3; TrEMBL-Plants: tr|A0A1B1J8Z2|A0A1B1J8Z2_LOTJA Class V chitinase protein; Found in the gene: LotjaGi5g1v0054700 | 10 | ||
| – | Chitinase, putative; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp|Q13231|CHIT1_HUMAN Chitotriosidase-1; TrEMBL-Plants: tr|A0A1B1J8Z2|A0A1B1J8Z2_LOTJA Class V chitinase protein; Found in the gene: LotjaGi5g1v0054800 | 21 | ||
| – | Chitinase; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp|Q9W5U2|CHIT3_DROME Probable chitinase 3; TrEMBL-Plants: tr|A0A1B1J8Z2|A0A1B1J8Z2_LOTJA Class V chitinase protein; Found in the gene: LotjaGi5g1v0055200 | 12 | ||
| – | Chitinase; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp|Q13231|CHIT1_HUMAN Chitotriosidase-1; TrEMBL-Plants: tr|I3S8H4|I3S8H4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0206300 | 21 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd02879 | CDD | 1 | 5.26 |