Domain Predictions — View

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cd03236

Source: CDD

Description

ABC_RNaseL_inhibitor_domain1

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi2g1v0349000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ABC(ATP-binding) family transporter; TAIR: AT4G19210.1 RNAse l inhibitor protein 2; Swiss-Prot: sp\|Q8LPJ4\|AB2E_ARATH ABC transporter E family member 2; TrEMBL-Plants: tr\|A0A0L9URH1\|A0A0L9URH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349000	Domains G3DSA:3.40.50.300 IPR003439 IPR003593 IPR007209 IPR013283 IPR017871 IPR017896 IPR017900 IPR027417 IPR034348 PF00005 PF00037 PF04068 PR01868 PS00198 PS00211 PS50893 PS51379 PTHR19248 PTHR19248:SF24 SM00382 SSF52540 SSF54862 cd03236 cd03237	25
LotjaGi2g1v0349000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc import ATP-binding protein ZnuC; TAIR: AT4G19210.1 RNAse l inhibitor protein 2; Swiss-Prot: sp\|Q8LPJ4\|AB2E_ARATH ABC transporter E family member 2; TrEMBL-Plants: tr\|A0A0L9URH1\|A0A0L9URH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349000	Domains G3DSA:3.40.50.300 IPR003439 IPR003593 IPR013283 IPR017871 IPR027417 IPR034348 NON_CYTOPLASMIC_DOMAIN PF00005 PR01868 PS00211 PS50893 PTHR19248 PTHR19248:SF24 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00382 SSF52540 cd03236 cd03237	22
LotjaGi2g1v0349000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ABC(ATP-binding) family transporter; TAIR: AT4G19210.1 RNAse l inhibitor protein 2; Swiss-Prot: sp\|Q8LPJ4\|AB2E_ARATH ABC transporter E family member 2; TrEMBL-Plants: tr\|A0A0L9URH1\|A0A0L9URH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349000	Domains G3DSA:3.40.50.300 IPR003439 IPR003593 IPR007209 IPR013283 IPR017871 IPR017896 IPR017900 IPR027417 IPR034348 PF00005 PF00037 PF04068 PR01868 PS00198 PS00211 PS50893 PS51379 PTHR19248 PTHR19248:SF24 SM00382 SSF52540 SSF54862 cd03236 cd03237	25
LotjaGi2g1v0349000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ABC(ATP-binding) family transporter; TAIR: AT4G19210.1 RNAse l inhibitor protein 2; Swiss-Prot: sp\|Q8LPJ4\|AB2E_ARATH ABC transporter E family member 2; TrEMBL-Plants: tr\|A0A0L9URH1\|A0A0L9URH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349000	Domains G3DSA:3.40.50.300 IPR003439 IPR003593 IPR007209 IPR013283 IPR017871 IPR017896 IPR017900 IPR027417 IPR034348 PF00005 PF00037 PF04068 PR01868 PS00198 PS00211 PS50893 PS51379 PTHR19248 PTHR19248:SF24 SM00382 SSF52540 SSF54862 cd03236 cd03237	25

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd03237	CDD	1	25.00