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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0349000 |
| Transcript ID | LotjaGi2g1v0349000.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC(ATP-binding) family transporter; TAIR: AT4G19210.1 RNAse l inhibitor protein 2; Swiss-Prot: sp|Q8LPJ4|AB2E_ARATH ABC transporter E family member 2; TrEMBL-Plants: tr|A0A0L9URH1|A0A0L9URH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:82582411..82588625) extracted from Lotus japonicus Gifu genome v1.2.
CCCTTCTCTTCCCTCTAAAAAACTAGCTTGTTCGTGTTAGGGTAATGGCGTCGTTGCCGACTGTTTAGCTAAGAACTCTT TTTTGTTTATAAGTTTCAAACTCCATAAAAGCCCAACATTATGATCCATGTAAACTCGGATCCATATCAATATCGGACAA AACCGACCCATATACAGAATCCGATTCCAGTTGCAGGGTGAAGCAAGCAAACCCTATATACTTGAACGTTCTCACCACAC GCCACTCTCTCTCTCTCTCTCTCATCGCCGTTCTCCGATCGATTCCGCCACCGTGGTTCAACCGCAGCGAACAATTCCCA TTTCCGCAAGTTGAAATCAAGGGTTTGAGGCGACATGTCTGATCGATTGACCCGTATTGCCATCGTGAGCAACGACAGGT GCAAGCCGAAGAAGTGTCGTCAGGAGTGTAAGAAGAGTTGCCCCGTGGTCAGAACCGGTAAGATCTGATTGTCACGCTTT CTAGGGTTCAATTCTCAATTCTGGGGTGGAGTTTTTTTGTACCCTATTGCCGATACAAGCTTCGAATTTCCAAGTGGGAG CTTAGAAATGGGTTTTTCTTTCTTGAATTTGTTTGTTCATGGAATTTACGTGGCTGAATTCTGATGGGGTGTGTTTTGAG TGACGAATTGTGTGTTTGATTACAGGTAGGTTGTGTATTGAGGTGTCTTCTGCATCGAAGATTGCTTACATATCTGAGGA ATTGTGCATTGGATGCGGTATTTGTGTTAAGGTATTGGATATGGCGTTATGGTGGTATTGTTATCTTTGATTCTAGTTGA TGGGGTTTTATTTTATGTGATGAGGTTTGTTAATTGTTATCCATTGGTGTAGAAATGTCCTTTTGAAGCTATCCAGATTA TCAACTTGCCCAAGGACTTGGACAAAGACACCACTCATAGATATGGTCCTAATACTTTTAAGCTGCATAGGTGAGTTATC ATTTAGCTGCATTTTCTTGTAAATTTGATAGTAAACTAGTGATTAGCTTCTGATGAATAGAAATATGATGATGGCAGGTT GCCAGTGCCGAGGCCAGGGCAAGTGCTTGGGTTGGTTGGGACAAATGGAATCGGCAAGTCCACTGCCCTTAAAGTGTTGG CTGGAAAATTGAAACCAAACCTGGGTCGTTTCACTGTAATAACCACAATTTGACTCTTTCGTTACAGCTTCAGTGTTTGG TGTTTTACTGTATTCATTTAATTTTTGTTTTCCTTGCAGAACCCGCCTGATTGGCAGGAAATTTTGACCTACTTTCGAGG ATCTGAATTGCAGAATTACTTCACTCGAATTCTAGAGGATGATTTGAAGGTGATGTCTGTGTTATTTGATATGTATGAAT GTAGTGATGTCGCAGTATAACTTAGCAAAGTTTATGTGTTCTTTCAACATGTGTGTTTTTCTAATTTGAATTTTATGTTT ATTTCTGTTTTTCTTACTGGACCAATTATTGTTTATGTGATTTTAAGAATCTATGAACCTTAGACTGTTAGAATTGCCTC AATCGAGAAGGGATACACTAATATTGTCAATAGAGTCAGTAAATTTATTATTCTGTTGTGCCCTTCAGATGACTAACTTA ACATAGGTCATAGGTGAGATATGTTGTGATTTGTGAGTCTTTTTGGTAAATACATGTAGAAGAAGCTAGTAGTTAGCAGT TACAGTACAGATGACGTTCAAATTGATGACCGAAGTCCAAGTTCAGCTTCAGCTTCATAATTCAGTCTGTTGCATCATTG ATATGTAGAGGCCCTTTCAGTATTGATACATTCAAATACCATATCTTCATGACTAGCTATCTTAACATATCACCGTATGT ATATCTGAAATTTACTACATATATATATGCTAGTTTATATCTAACCATATCTCTAAAGTCTAAACTATGATTACCATGGA AATACCAAATTCTAAATCCTTGTAATATATAAATATAAATCTTAAGCATTGTAATCATTAGATGGTTATATGTTTTATAT TTTAGCACAAATCCAGCACTACAACTAAATCTAGCATTGTAACATCACTTTTCCTTTACTTTTGGAAGTTCAGTCTTATC GTTGCTTGATATGCTAGCTTTTGCTTTGCTTACATTTTACTGAATATTCTCTCATTAGCGCTAATCTGCTGTTTGAATTT TGTAATAATAAGATAATATACCATTTAAAAAAAGTTTTTCTTCCTGTTTGTAATTGTGCTTATTTTAATATTACATAGGC TATCATCAAGCCTCAGTATGTTGACCATATTCCAAAAGCTGTGCAAGGGAATGTGGGGGAGGTGCTAGAGCAGAAAGATG AGAGAGATGTAAAGGCAGAGCTTTGTACTGATCTGGAGCTTAACCAGGTTATAGATCGTAATGTTGGTGATCTTTCAGGT GGTGAGCTCCAAAGGTTTGCAATTGCAGTTGTTGCCATCCAGAATGCTGAGATATACATGTTTGATGAACCTTCTAGTTA TCTTGATGTGAAACAAAGGCTGAAAGCTGCCCAAGTCATTCGATCATTGCTCAGGCCTAACAGGTTAGTTCCCTTTTCTC TCAGTAGTCTCTTCTTTCAATCTTGTCTACATCTCCATTTGATTTTGTTTCCAATTCTCTTGTTTCAGCTATGTAATTGT TGTAGAGCACGATCTTAGTGTCTTGGACTACTTATCGGACTTTATTTGCTGCTTGTATGGCAAACCTGGTGCATATGGAG TGGTAACCCTTCCTTTCTCAGTCAGAGAAGGAATTAACATCTTCTTGGCTGGGTTTGTTCCAACAGAAAATCTTAGGTTC CGGGATGAATCTCTTACGTTCAAGGTATCTCAACCACCCATTTGCTGAATCTAAAGCCTAAACTCAATATTGCTGTTAAG AATGAAATGGTTCAGCACTGAAATTGATGTGGTGGTGCATGTTTAAACATGCCAAAGATAAAATTGACTCATTCCGAATA TATGTAGAACCAATTGCATTATTCAAATCATTACATGACATTTATTTCCTTCAGTGCTGCATCATATATTTGATTAAATG TCCACATTTTCTTCGCCTTACAAATGAAAATATTTTAGGGCTTGTTTGATTCTCTTTTTAGTTTTTGTATTTAGAAACTG TTTTCAGAAACAATTTTTAAATCTGTTCTTTAGAAAAAGAGAAAGAAGAAACGGTTTGAGCGATATGCTTTTCAAAATTG GAAAAGCTGTGATTTGAAAACTAAAAAAAAAACTGAAAATATCTGAGATGTTTTGTTTTTTCAGTTTTAATAACTGGAAA TAACAACTTTTTTTTAAGGCCTGTTTTCAAATACTGTCCATACCAAATGAGTTTTTTTTTTCTTTCTGTTTTTGTATTTA GAAACTGTTTTCAGAAACAATTTTAATCTGTTCTTTAGAAAAAGAGAAAGAAGAAACGGTTTGAGCGATATGCTTTTCAA AATTGGAAAAGCTGTGATTTGAAAACTAAAAACAAAAACTGAAAATATCTGAGATGTTTTGTTTTTTCAGTTTTAATAAC TGGAAATAACAACTGTTTTTTAAGGTCTGTTTTCAAATACTGTCCATACCAAATGAGTTTTTTTCTTTTACTGTTTTTAA AACCTGAAAGCTGTTCCATAAAACAGTAACCAGACAGGCCCTTAATCCTTTTTTTATCATTGCTTTATTATTTATTACTG TAAATTTCTGTACTTAATTTTGAATTCCAAAAGTTCTCAGCTTTATCGCACACACCTCATTCTTTTGTTGTGTCTAGGTT GCTGAGACTCCACAGGAAACTGCCGAGGAAGCTCAAACATATGCTCGATACAAGTATCCAGCCATGAGCAAAACTCAAGG CAATTTCAGGCTTCGTGTTGCTGAGGGAGAATTTACTGATTCTCAAATTATTGTGATGCTGGGTGAGAATGGGACCGGAA AGACAACATTTATTCGTATGCTGGTATTCTTTTAGTCATATTTGTCTTTATGGAACTGTCTAATTCTTCGCATATTTATT CACCTAACTCTTTTGTATTACTCAGGCTGGTTTATTGAAGCCTGACTCTGTAGAAGGTGGTTCTGATGTGGATATGCCTG AGTTTAACGTTTCATACAAGCCTCAGAAGATTAGCCCTAAGTTCCAATCAACTGTTAGACACTTACTGCACCAAAAAATT CGTGATGCATATACCCATCCCCAGTTTGTATCAGATGTTATGAAGCCACTTCTTATCGAACAATTAATGGACCAAGAAGT TGTGAATCTTTCTGGTGGAGAGTTGCAAAGAGTTGCATTATGTCTTTGTCTCGGAAAGGTATTATATGTTTCATTCTTGA AAACAAGTCGAGATTATTGTGCACCTTAAATTCTAGCATCTGCCCCATTTTTTTCTTCCCCCCTGCATTCTTTGATACTT TCTAGTTTCCTATAGGAGGATGGTCTTTCCATATAATCAAAATGATTTTATTGCTAGTACCTTCGTTTTCTGGAACTTTT AGGATCTGTTGTGAGCTTTCTGTCTACTAAATTTTGTTTCAGACTATATAGCAATTAACATTTCCTGATTCGTTACTGTT CTACTATAGCAACCTGTAGACTGTAGTAGTCTCTACCTTTGCCAAATGACATGGCAAGAATTTTGGAACTATTGTCTCAT AATTTACATGCATGCCTCCATTCCCCCTCCCCTCTCCTAAACTAAATAGCATTTCATGTTTTCTGATCCATTGTTTCCTA CCACACAGCCTGCTGACATCTATCTGATAGATGAGCCAAGTGCATATCTTGATTCTGAACAGCGAATTCACGCTGCCAAA GTCATTAAGAGGTTTATTCTTCATGCAAAGAAAACGGCTTTTGTGGTCGAGCATGATTTCATCATGGCAACATACCTTGC TGACAGAGTTATTGTTTACGAGGGTAGACCTTCAATCGATTGTACTGCAAATTGTCCACAATCATTGTTGTCTGGGATGA ACCTTTTCTTATCAGTAAGTGTCATATCATATTTGTGAAAGTTTAGAAGTATTTTTGTGGTCTGTGCTGGTACTTATGTG ATATATCTAATGCAATTGCTGTTGCAGCATCTTGACATCACATTTAGGAGAGACCCAACCAACTTTCGTCCAAGGATCAA CAAAATTGATTCAACCAAGGACAGAGAACAAAAGTCTGCTGGGTCTTATTATTATCTTGATGACTGAGCTTACACTCACG GCAGGTTTGCCCCTTTGCATATGCTATTCTTCTTATAGTTGAATGTTTATAACCGCAACTGGAAACTGACCATTTTCTTT TCTTACAGTTGCTCTTTCGTCATTGCAAAAAGTGCATCAGTTTGAGCTTGTCACGGAATCTCTGCTTTTGTTCCCTTGAT GCTCTGACATAAGATTGTGCTTTTTTCCATTGAAGACATCTTTTTCAATGGATAGAAGAGCCTGTATGTTGGTTGGTGCA TTTGTATATGTTTCTCTAATATCTAGTGCAGTTGCTCATCACCAGTTTTGGTTTGACTTAGGTGGGTAAATCTGAACATT ATAAGAGTTTATATTGGTCATGGTTTTACTCTTGATGTCCGAAATTTACCGGAACATTCATTATATCAGATTTAGTTTAT TGCCTTCCCTGGCTCTCGTAATTTATCAGTTGAATATGTAATGGAGTATGGTTCACTCCCATTTTACTTGATTTTGATAA ATGATATTTTAAGCTTTACTATTTGCCGTCCCTGTTCATTGTCATCAAATTATTTTACAAAATCGGTTTTACTATAGTTA ATTTGAGGATTATTAGTGGGGAATTATTCAACTAGTATAAACATACATAATCCACTAATGAGTTGGTCTAGTTAAAAGCA AGCTACTGAGCTAGATTTTGTAAGGGTGAAAACATAAAAACCTGTGATTATGTGAAAGGAAGCTAAATCCATGTGATTAT GTTGAAAAAAGGTTTTTACTAAAAACATGTTCAATTCTCTGAAATTTCTTGGCCTTGAAGAGAATTGGCTTTCCCTCATA TAGAATACCAATATCAATAAGACTATGATATGTAATATCCAACATTTTGAGGTTCTTTCGTGATTCTTCCATCTATAATA AGCATAAGGACCCAAACCTGAAGAGCAAAGCAACATATCTAAAGCATTGGAGACTTTGATCCGTATCAAAAGTGAACCTA TAGGGCCAATAAATCATGTAAAATATTATATCATCTAATAGAATCTGCAGTGAAG
CDS sequence (LotjaGi2g1v0349000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGATCGATTGACCCGTATTGCCATCGTGAGCAACGACAGGTGCAAGCCGAAGAAGTGTCGTCAGGAGTGTAAGAA GAGTTGCCCCGTGGTCAGAACCGGTAGGTTGTGTATTGAGGTGTCTTCTGCATCGAAGATTGCTTACATATCTGAGGAAT TGTGCATTGGATGCGGTATTTGTGTTAAGAAATGTCCTTTTGAAGCTATCCAGATTATCAACTTGCCCAAGGACTTGGAC AAAGACACCACTCATAGATATGGTCCTAATACTTTTAAGCTGCATAGGTTGCCAGTGCCGAGGCCAGGGCAAGTGCTTGG GTTGGTTGGGACAAATGGAATCGGCAAGTCCACTGCCCTTAAAGTGTTGGCTGGAAAATTGAAACCAAACCTGGGTCGTT TCACTAACCCGCCTGATTGGCAGGAAATTTTGACCTACTTTCGAGGATCTGAATTGCAGAATTACTTCACTCGAATTCTA GAGGATGATTTGAAGGCTATCATCAAGCCTCAGTATGTTGACCATATTCCAAAAGCTGTGCAAGGGAATGTGGGGGAGGT GCTAGAGCAGAAAGATGAGAGAGATGTAAAGGCAGAGCTTTGTACTGATCTGGAGCTTAACCAGGTTATAGATCGTAATG TTGGTGATCTTTCAGGTGGTGAGCTCCAAAGGTTTGCAATTGCAGTTGTTGCCATCCAGAATGCTGAGATATACATGTTT GATGAACCTTCTAGTTATCTTGATGTGAAACAAAGGCTGAAAGCTGCCCAAGTCATTCGATCATTGCTCAGGCCTAACAG CTATGTAATTGTTGTAGAGCACGATCTTAGTGTCTTGGACTACTTATCGGACTTTATTTGCTGCTTGTATGGCAAACCTG GTGCATATGGAGTGGTAACCCTTCCTTTCTCAGTCAGAGAAGGAATTAACATCTTCTTGGCTGGGTTTGTTCCAACAGAA AATCTTAGGTTCCGGGATGAATCTCTTACGTTCAAGGTTGCTGAGACTCCACAGGAAACTGCCGAGGAAGCTCAAACATA TGCTCGATACAAGTATCCAGCCATGAGCAAAACTCAAGGCAATTTCAGGCTTCGTGTTGCTGAGGGAGAATTTACTGATT CTCAAATTATTGTGATGCTGGGTGAGAATGGGACCGGAAAGACAACATTTATTCGTATGCTGGCTGGTTTATTGAAGCCT GACTCTGTAGAAGGTGGTTCTGATGTGGATATGCCTGAGTTTAACGTTTCATACAAGCCTCAGAAGATTAGCCCTAAGTT CCAATCAACTGTTAGACACTTACTGCACCAAAAAATTCGTGATGCATATACCCATCCCCAGTTTGTATCAGATGTTATGA AGCCACTTCTTATCGAACAATTAATGGACCAAGAAGTTGTGAATCTTTCTGGTGGAGAGTTGCAAAGAGTTGCATTATGT CTTTGTCTCGGAAAGCCTGCTGACATCTATCTGATAGATGAGCCAAGTGCATATCTTGATTCTGAACAGCGAATTCACGC TGCCAAAGTCATTAAGAGGTTTATTCTTCATGCAAAGAAAACGGCTTTTGTGGTCGAGCATGATTTCATCATGGCAACAT ACCTTGCTGACAGAGTTATTGTTTACGAGGGTAGACCTTCAATCGATTGTACTGCAAATTGTCCACAATCATTGTTGTCT GGGATGAACCTTTTCTTATCACATCTTGACATCACATTTAGGAGAGACCCAACCAACTTTCGTCCAAGGATCAACAAAAT TGATTCAACCAAGGACAGAGAACAAAAGTCTGCTGGGTCTTATTATTATCTTGATGACTGA
Protein sequence (LotjaGi2g1v0349000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDRLTRIAIVSNDRCKPKKCRQECKKSCPVVRTGRLCIEVSSASKIAYISEELCIGCGICVKKCPFEAIQIINLPKDLD KDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFTNPPDWQEILTYFRGSELQNYFTRIL EDDLKAIIKPQYVDHIPKAVQGNVGEVLEQKDERDVKAELCTDLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMF DEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTE NLRFRDESLTFKVAETPQETAEEAQTYARYKYPAMSKTQGNFRLRVAEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKP DSVEGGSDVDMPEFNVSYKPQKISPKFQSTVRHLLHQKIRDAYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALC LCLGKPADIYLIDEPSAYLDSEQRIHAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYEGRPSIDCTANCPQSLLS GMNLFLSHLDITFRRDPTNFRPRINKIDSTKDREQKSAGSYYYLDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 332 | 332 | 1.8E-85 | – | |
| PANTHER | 1 | 606 | 606 | 0.0 | – | |
| PANTHER | 1 | 606 | 606 | 0.0 | ||
| SUPERFAMILY | 6 | 145 | 140 | 1.26E-15 | – | |
| Pfam | 6 | 37 | 32 | 3.5E-14 | ||
| PRINTS | 24 | 39 | 16 | 5.2E-73 | ||
| ProSiteProfiles | 46 | 75 | 30 | 10.927 | ||
| Pfam | 49 | 71 | 23 | 8.8E-9 | ||
| PRINTS | 52 | 76 | 25 | 5.2E-73 | ||
| ProSitePatterns | 55 | 66 | 12 | - | ||
| ProSiteProfiles | 70 | 315 | 246 | 14.573 | ||
| CDD | 78 | 332 | 255 | 1.62021E-170 | ||
| PRINTS | 79 | 99 | 21 | 5.2E-73 | ||
| SUPERFAMILY | 101 | 291 | 191 | 8.35E-33 | ||
| Pfam | 102 | 244 | 143 | 4.9E-17 | ||
| SMART | 102 | 294 | 193 | 1.3E-7 | ||
| PRINTS | 107 | 132 | 26 | 5.2E-73 | ||
| PRINTS | 140 | 156 | 17 | 5.2E-73 | ||
| PRINTS | 156 | 182 | 27 | 5.2E-73 | ||
| ProSitePatterns | 217 | 231 | 15 | - | ||
| Gene3D | 334 | 604 | 271 | 7.4E-43 | – | |
| ProSiteProfiles | 344 | 569 | 226 | 14.553 | ||
| CDD | 350 | 599 | 250 | 3.44107E-157 | – | |
| Pfam | 370 | 497 | 128 | 1.7E-16 | ||
| SUPERFAMILY | 370 | 542 | 173 | 8.6E-33 | ||
| SMART | 373 | 547 | 175 | 5.9E-11 | ||
| ProSitePatterns | 469 | 483 | 15 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi2g1v0349000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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