Domain Predictions — View

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PF04068

Source: Pfam

Description

Possible Fer4-like domain in RNase L inhibitor, RLI

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0188359.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable ribosome biogenesis protein C16orf42 homolog [Glycine max] gi\|356525511\|ref\|XP_003531368.1\|	Domains IPR007177 IPR007209 IPR022968 PD016638 PF04034 PF04068 PTHR20426 PTHR20426:SF0 mobidb-lite	9
Lj2g3v1560740.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ABC transporter E family member 2-like [Cicer arietinum] gi\|502161914\|ref\|XP_004512327.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.70.20 G3DSA:3.40.50.300 IPR003439 IPR003593 IPR007209 IPR013283 IPR017871 IPR017896 IPR017900 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF00037 PF04068 PR01868 PS00198 PS00211 PS50893 PS51379 PTHR19248 SM00382 SSF52540 SSF54862 TRANSMEMBRANE	25
LotjaGi2g1v0349000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ABC(ATP-binding) family transporter; TAIR: AT4G19210.1 RNAse l inhibitor protein 2; Swiss-Prot: sp\|Q8LPJ4\|AB2E_ARATH ABC transporter E family member 2; TrEMBL-Plants: tr\|A0A0L9URH1\|A0A0L9URH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349000	Domains G3DSA:3.40.50.300 IPR003439 IPR003593 IPR007209 IPR013283 IPR017871 IPR017896 IPR017900 IPR027417 IPR034348 PF00005 PF00037 PF04068 PR01868 PS00198 PS00211 PS50893 PS51379 PTHR19248 PTHR19248:SF24 SM00382 SSF52540 SSF54862 cd03236 cd03237	25
LotjaGi2g1v0349000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ABC(ATP-binding) family transporter; TAIR: AT4G19210.1 RNAse l inhibitor protein 2; Swiss-Prot: sp\|Q8LPJ4\|AB2E_ARATH ABC transporter E family member 2; TrEMBL-Plants: tr\|A0A0L9URH1\|A0A0L9URH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349000	Domains G3DSA:3.40.50.300 IPR003439 IPR003593 IPR007209 IPR013283 IPR017871 IPR017896 IPR017900 IPR027417 IPR034348 PF00005 PF00037 PF04068 PR01868 PS00198 PS00211 PS50893 PS51379 PTHR19248 PTHR19248:SF24 SM00382 SSF52540 SSF54862 cd03236 cd03237	25
LotjaGi2g1v0349000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ABC(ATP-binding) family transporter; TAIR: AT4G19210.1 RNAse l inhibitor protein 2; Swiss-Prot: sp\|Q8LPJ4\|AB2E_ARATH ABC transporter E family member 2; TrEMBL-Plants: tr\|A0A0L9URH1\|A0A0L9URH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349000	Domains G3DSA:3.40.50.300 IPR003439 IPR003593 IPR007209 IPR013283 IPR017871 IPR017896 IPR017900 IPR027417 IPR034348 PF00005 PF00037 PF04068 PR01868 PS00198 PS00211 PS50893 PS51379 PTHR19248 PTHR19248:SF24 SM00382 SSF52540 SSF54862 cd03236 cd03237	25
LotjaGi4g1v0401100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribosome biogenesis protein TSR3-like protein; TAIR: AT5G10070.2 RNase L inhibitor protein-like protein; Swiss-Prot: sp\|Q5HZH2\|TSR3_MOUSE Ribosome biogenesis protein TSR3 homolog; TrEMBL-Plants: tr\|I1KT68\|I1KT68_SOYBN Probable ribosome biogenesis protein GLYMA_08G139500; Found in the gene: LotjaGi4g1v0401100	Domains IPR007177 IPR007209 IPR022968 MF_01116 PF04034 PF04068 PTHR20426 mobidb-lite	8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	16.67