Domain Predictions — View

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cd08640

Source: CDD

Description

DNA_pol_A_plastid_like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi4g1v0197800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp\|F4I6M1\|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|A0A151U285\|A0A151U285_CAJCA DNA polymerase I; Found in the gene: LotjaGi4g1v0197800	Domains G3DSA:1.10.150.20 G3DSA:3.30.420.10 G3DSA:3.30.70.370 IPR001098 IPR002298 IPR002562 IPR012337 IPR036397 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00476 PF01612 PR00868 PTHR10133 PTHR10133:SF53 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00482 SSF53098 SSF56672 SignalP-TM cd06139 cd08640 mobidb-lite	26
LotjaGi4g1v0197800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp\|F4I6M1\|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|A0A151U285\|A0A151U285_CAJCA DNA polymerase I; Found in the gene: LotjaGi4g1v0197800	Domains G3DSA:1.10.150.20 G3DSA:3.30.420.10 G3DSA:3.30.70.370 IPR001098 IPR002298 IPR002562 IPR012337 IPR036397 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00476 PF01612 PR00868 PTHR10133 PTHR10133:SF53 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00482 SSF53098 SSF56672 SignalP-TM cd06139 cd08640 mobidb-lite	26
LotjaGi4g1v0197800.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp\|F4I6M1\|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|A0A151U285\|A0A151U285_CAJCA DNA polymerase I; Found in the gene: LotjaGi4g1v0197800	Domains G3DSA:1.10.150.20 G3DSA:3.30.420.10 G3DSA:3.30.70.370 IPR001098 IPR002298 IPR036397 IPR043502 PF00476 PR00868 PTHR10133 PTHR10133:SF53 SM00482 SSF56672 cd08640	14
LotjaGi6g1v0163900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp\|F4I6M1\|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|G7J1V4\|G7J1V4_MEDTR PolI-like B DNA polymerase; Found in the gene: LotjaGi6g1v0163900	Domains G3DSA:1.10.150.20 G3DSA:3.30.420.10 G3DSA:3.30.70.370 IPR001098 IPR002298 IPR002562 IPR012337 IPR036397 IPR043502 PF00476 PF01612 PR00868 PTHR10133 PTHR10133:SF53 SM00482 SSF53098 SSF56672 cd06139 cd08640 mobidb-lite	20
LotjaGi6g1v0163900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp\|F4I6M1\|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|A0A0B2NWI0\|A0A0B2NWI0_GLYSO DNA polymerase I; Found in the gene: LotjaGi6g1v0163900	Domains G3DSA:1.10.150.20 G3DSA:3.30.420.10 G3DSA:3.30.70.370 IPR001098 IPR002298 IPR036397 IPR043502 PF00476 PR00868 PTHR10133 PTHR10133:SF53 SM00482 SSF56672 cd08640 mobidb-lite	15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	20.00