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Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Cicer arietinum] gi|502154632|ref|XP_004509767.1| | 17 | ||
– | PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine max] gi|356498232|ref|XP_003517957.1| | 20 | ||
– | PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Glycine max] gi|356514404|ref|XP_003525896.1| | 17 | ||
– | PREDICTED: 5'-3' exonuclease-like [Glycine max] gi|356561357|ref|XP_003548949.1| | 6 | ||
– | PREDICTED: DNA polymerase I-like [Glycine max] gi|356500355|ref|XP_003518998.1| | 10 | ||
– | PREDICTED: DNA polymerase theta-like [Cicer arietinum] gi|502124469|ref|XP_004498542.1| | 16 | ||
– | PREDICTED: DNA repair protein REV1-like isoform X2 [Cicer arietinum] gi|502158837|ref|XP_004511297.1| | 25 | ||
– | PREDICTED: DNA repair protein REV1-like isoform X2 [Cicer arietinum] gi|502158837|ref|XP_004511297.1| | 25 | ||
– | Meiotic recombination protein DMC1 homolog [Glycine max] gi|351726994|ref|NP_001238425.1| | 20 | ||
– | PREDICTED: DNA polymerase lambda-like isoform X1 [Cicer arietinum] gi|502181313|ref|XP_004516776.1| | 32 | ||
– | Flap endonuclease GEN-like protein [Medicago truncatula] gi|357507117|ref|XP_003623847.1| | 17 | ||
– | PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like isoform X2 [Cicer arietinum] gi|502102072|ref|XP_004491958.1| | 21 | ||
– | PREDICTED: flap endonuclease GEN-like 2-like [Cicer arietinum] gi|502175270|ref|XP_004515700.1| | 21 | ||
– | PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Cicer arietinum] gi|502154632|ref|XP_004509767.1| | 17 | ||
– | PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Cicer arietinum] gi|502154632|ref|XP_004509767.1| | 16 | ||
– | DNA polymerase [Medicago truncatula] gi|357494395|ref|XP_003617486.1| | 12 | ||
– | PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like [Glycine max] gi|356556951|ref|XP_003546783.1| | 32 | ||
– | PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1 [Cicer arietinum] gi|502146616|ref|XP_004506531.1| | 16 | ||
– | PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1 [Cicer arietinum] gi|502146616|ref|XP_004506531.1| | 16 | ||
– | PREDICTED: DNA polymerase eta-like isoform X3 [Cicer arietinum] gi|502141797|ref|XP_004504643.1| | 8 | ||
– | PREDICTED: DNA polymerase eta-like isoform X3 [Cicer arietinum] gi|502141797|ref|XP_004504643.1| | 15 | ||
– | PREDICTED: DNA polymerase eta-like isoform X3 [Cicer arietinum] gi|502141797|ref|XP_004504643.1| | 15 | ||
– | PREDICTED: DNA polymerase I-like isoform X2 [Cicer arietinum] gi|502142965|ref|XP_004505167.1| | 8 | ||
– | PREDICTED: DNA polymerase I-like isoform X2 [Cicer arietinum] gi|502142965|ref|XP_004505167.1| | 11 | ||
– | PREDICTED: DNA repair protein RAD51 homolog 1-like [Cicer arietinum] gi|502150634|ref|XP_004508049.1| | 24 | ||
– | PREDICTED: exonuclease 1-like [Cicer arietinum] gi|502140539|ref|XP_004504251.1| | 24 | ||
– | PREDICTED: flap endonuclease 1-like isoform X3 [Cicer arietinum] gi|502117445|ref|XP_004495823.1| | 23 | ||
– | PREDICTED: meiotic recombination protein DMC1 homolog [Cicer arietinum] gi|502119553|ref|XP_004496658.1| | 16 | ||
– | PREDICTED: translocation protein SEC63 homolog [Glycine max] gi|356530479|ref|XP_003533808.1| | 25 | ||
– | DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7K3G7|G7K3G7_MEDTR PolI-like B DNA polymerase; Found in the gene: LotjaGi1g1v0035300_LC | 10 | ||
– | ATP-dependent RNA helicase; TAIR: AT5G61140.2 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9FNQ1|DEXHE_ARATH DExH-box ATP-dependent RNA helicase DExH14; TrEMBL-Plants: tr|K7KW51|K7KW51_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0188900 | 35 | ||
– | ATP-dependent RNA helicase; TAIR: AT5G61140.2 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9FNQ1|DEXHE_ARATH DExH-box ATP-dependent RNA helicase DExH14; TrEMBL-Plants: tr|A0A0B2Q999|A0A0B2Q999_GLYSO Activating signal cointegrator 1 complex subunit 3; Found in the gene: LotjaGi1g1v0188900 | 35 | ||
– | DNA helicase; TAIR: AT4G32700.2 MUS308 and mammalian DNA polymerase-like protein; Swiss-Prot: sp|Q588V7|TEB_ARATH Helicase and polymerase-containing protein TEBICHI; TrEMBL-Plants: tr|K7M6P7|K7M6P7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0198600 | 33 | ||
– | 5'-3' exonuclease; TAIR: AT1G34380.2 5'-3' exonuclease family protein; Swiss-Prot: sp|O67550|EX53_AQUAE 5'-3' exonuclease; TrEMBL-Plants: tr|K7MHK5|K7MHK5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0098200 | 16 | ||
– | DNA-directed RNA polymerase; TAIR: AT1G68990.1 male gametophyte defective 3; Swiss-Prot: sp|Q93Y94|RPOT1_NICSY DNA-directed RNA polymerase 1, mitochondrial; TrEMBL-Plants: tr|A0A0L9TN70|A0A0L9TN70_PHAAN DNA-directed RNA polymerase; Found in the gene: LotjaGi2g1v0289500 | 19 | ||
– | DNA polymerase lambda; TAIR: AT1G10520.1 DNA polymerase lambda (POLL); Swiss-Prot: sp|Q9FNY4|DPOLL_ARATH DNA polymerase lambda; TrEMBL-Plants: tr|I1JCZ1|I1JCZ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0314500 | 30 | ||
– | DNA polymerase lambda-like protein; TAIR: AT1G10520.1 DNA polymerase lambda (POLL); Swiss-Prot: sp|Q9FNY4|DPOLL_ARATH DNA polymerase lambda; TrEMBL-Plants: tr|A0A072TY09|A0A072TY09_MEDTR DNA polymerase lambda-like protein; Found in the gene: LotjaGi2g1v0314500 | 36 | ||
– | DNA polymerase lambda-like protein; TAIR: AT1G10520.1 DNA polymerase lambda (POLL); Swiss-Prot: sp|Q9FNY4|DPOLL_ARATH DNA polymerase lambda; TrEMBL-Plants: tr|A0A072TY09|A0A072TY09_MEDTR DNA polymerase lambda-like protein; Found in the gene: LotjaGi2g1v0314500 | 36 | ||
– | DNA polymerase lambda; TAIR: AT1G10520.1 DNA polymerase lambda (POLL); Swiss-Prot: sp|Q9FNY4|DPOLL_ARATH DNA polymerase lambda; TrEMBL-Plants: tr|I1JCZ1|I1JCZ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0314500 | 37 | ||
– | DNA repair endonuclease UVH1-like protein; TAIR: AT5G41150.1 Restriction endonuclease, type II-like superfamily protein; Swiss-Prot: sp|Q9LKI5|XPF_ARATH DNA repair endonuclease UVH1; TrEMBL-Plants: tr|K7LMX6|K7LMX6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0418900 | 12 | ||
– | DNA polymerase IV; TAIR: AT5G44750.1 DNA-directed DNA polymerase; Swiss-Prot: sp|A3EWL3|REV1_ARATH DNA repair protein REV1; TrEMBL-Plants: tr|A0A0R0LQ66|A0A0R0LQ66_SOYBN DNA repair protein REV1; Found in the gene: LotjaGi2g1v0461300 | 29 | ||
– | DNA polymerase IV; TAIR: AT5G44750.1 DNA-directed DNA polymerase; Swiss-Prot: sp|A3EWL3|REV1_ARATH DNA repair protein REV1; TrEMBL-Plants: tr|A0A0R0LQ66|A0A0R0LQ66_SOYBN DNA repair protein REV1; Found in the gene: LotjaGi2g1v0461300 | 29 | ||
– | DNA polymerase IV; TAIR: AT5G44750.1 DNA-directed DNA polymerase; Swiss-Prot: sp|A3EWL3|REV1_ARATH DNA repair protein REV1; TrEMBL-Plants: tr|A0A0R0LQ66|A0A0R0LQ66_SOYBN DNA repair protein REV1; Found in the gene: LotjaGi2g1v0461300 | 26 | ||
– | U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|A0A0L9UIS3|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500 | 37 | ||
– | U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|A0A0L9UIS3|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500 | 37 | ||
– | ATP-dependent helicase hrq1; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|G7IJ55|G7IJ55_MEDTR U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi3g1v0141500 | 28 | ||
– | ATP-dependent RNA helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|A0A0L9UIS3|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500 | 35 | ||
– | U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|G7IJ55|G7IJ55_MEDTR U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi3g1v0141500 | 21 | ||
– | Deoxycytidine kinase; TAIR: AT1G72040.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P27707|DCK_HUMAN Deoxycytidine kinase; TrEMBL-Plants: tr|U5U2L0|U5U2L0_PHAVU Deoxynucleoside kinase family; Found in the gene: LotjaGi3g1v0337100 | 15 | ||
– | Deoxycytidine kinase; TAIR: AT1G72040.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P27707|DCK_HUMAN Deoxycytidine kinase; TrEMBL-Plants: tr|U5U2L0|U5U2L0_PHAVU Deoxynucleoside kinase family; Found in the gene: LotjaGi3g1v0337100 | 15 | ||
– | DNA repair family protein; TAIR: AT2G45280.1 RAS associated with diabetes protein 51C; Swiss-Prot: sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3; TrEMBL-Plants: tr|A0A0B2RTD8|A0A0B2RTD8_GLYSO DNA repair protein RAD51 like 3; Found in the gene: LotjaGi3g1v0435300 | 15 | ||
– | DNA repair family protein; TAIR: AT2G45280.1 RAS associated with diabetes protein 51C; Swiss-Prot: sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3; TrEMBL-Plants: tr|A0A0B2RTD8|A0A0B2RTD8_GLYSO DNA repair protein RAD51 like 3; Found in the gene: LotjaGi3g1v0435300 | 15 | ||
– | DNA repair family protein; TAIR: AT2G45280.1 RAS associated with diabetes protein 51C; Swiss-Prot: sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3; TrEMBL-Plants: tr|A0A0R0KE22|A0A0R0KE22_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0435300 | 15 | ||
– | UvrABC system protein C; TAIR: AT1G12790.1 DNA ligase-like protein; Swiss-Prot: sp|F4IDW9|PTD_ARATH Protein PARTING DANCERS; TrEMBL-Plants: tr|K7LSF1|K7LSF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0543800 | 5 | ||
– | DNA polymerase IV; TAIR: AT5G44740.2 Y-family DNA polymerase H; Swiss-Prot: sp|Q8H2D5|POLH_ARATH DNA polymerase eta; TrEMBL-Plants: tr|I1KRK8|I1KRK8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0055000 | 18 | ||
– | Flap endonuclease Xni; TAIR: AT3G52050.1 5'-3' exonuclease family protein; Swiss-Prot: sp|O52225|DPO1_THEFI DNA polymerase I, thermostable; TrEMBL-Plants: tr|A0A0S3R340|A0A0S3R340_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0069300 | 19 | ||
– | DNA-directed RNA polymerase; TAIR: AT1G68990.1 male gametophyte defective 3; Swiss-Prot: sp|Q8L6J5|RPO1B_TOBAC DNA-directed RNA polymerase 1B, mitochondrial; TrEMBL-Plants: tr|A0A0S3R3N7|A0A0S3R3N7_PHAAN DNA-directed RNA polymerase; Found in the gene: LotjaGi4g1v0168100 | 26 | ||
– | DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151U285|A0A151U285_CAJCA DNA polymerase I; Found in the gene: LotjaGi4g1v0197800 | 26 | ||
– | DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151U285|A0A151U285_CAJCA DNA polymerase I; Found in the gene: LotjaGi4g1v0197800 | 26 | ||
– | DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151U285|A0A151U285_CAJCA DNA polymerase I; Found in the gene: LotjaGi4g1v0197800 | 14 | ||
– | DNA repair protein RAD51 like 1; TAIR: AT5G20850.1 RAS associated with diabetes protein 51; Swiss-Prot: sp|P94102|RAD51_ARATH DNA repair protein RAD51 homolog 1; TrEMBL-Plants: tr|A0A151SSM0|A0A151SSM0_CAJCA DNA repair protein RAD51 isogeny 1; Found in the gene: LotjaGi4g1v0319500 | 24 | ||
– | Flap endonuclease 1; TAIR: AT1G29630.2 5'-3' exonuclease family protein; Swiss-Prot: sp|Q60GC1|EXO1_ORYSJ Exonuclease 1; TrEMBL-Plants: tr|K7L667|K7L667_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0382400 | 25 | ||
– | DNA ligase-like protein; TAIR: AT3G05210.1 nucleotide repair protein; Swiss-Prot: sp|Q9MA98|ERCC1_ARATH DNA excision repair protein ERCC-1; TrEMBL-Plants: tr|K7LJM3|K7LJM3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0219300 | 11 | ||
– | DNA ligase-like protein; TAIR: AT3G05210.1 nucleotide repair protein; Swiss-Prot: sp|Q9MA98|ERCC1_ARATH DNA excision repair protein ERCC-1; TrEMBL-Plants: tr|K7LJM3|K7LJM3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0219300 | 11 | ||
– | Disrupted meiotic cDNA 1 protein; TAIR: AT3G22880.1 DNA repair (Rad51) family protein; Swiss-Prot: sp|Q96449|DMC1_SOYBN Meiotic recombination protein DMC1 homolog; TrEMBL-Plants: tr|A0A0R0HYK0|A0A0R0HYK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0309600 | 22 | ||
– | Disrupted meiotic cDNA 1 protein; TAIR: AT3G22880.2 DNA repair (Rad51) family protein; Swiss-Prot: sp|Q96449|DMC1_SOYBN Meiotic recombination protein DMC1 homolog; TrEMBL-Plants: tr|K7LL69|K7LL69_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0309600 | 22 | ||
– | Disrupted meiotic cDNA 1 protein; TAIR: AT3G22880.2 DNA repair (Rad51) family protein; Swiss-Prot: sp|Q96449|DMC1_SOYBN Meiotic recombination protein DMC1 homolog; TrEMBL-Plants: tr|A0A151U6N0|A0A151U6N0_CAJCA Meiotic recombination protein DMC1 isogeny; Found in the gene: LotjaGi5g1v0309600 | 22 | ||
– | ATP-dependent RNA helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|A0A0B2R3L5|A0A0B2R3L5_GLYSO U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi5g1v0347000_LC | 35 | ||
– | DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7J1V4|G7J1V4_MEDTR PolI-like B DNA polymerase; Found in the gene: LotjaGi6g1v0163900 | 20 | ||
– | DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0B2NWI0|A0A0B2NWI0_GLYSO DNA polymerase I; Found in the gene: LotjaGi6g1v0163900 | 15 | ||
– | DNA-directed RNA polymerase; TAIR: AT2G24120.1 DNA/RNA polymerases superfamily protein; Swiss-Prot: sp|P69243|RPO3A_TOBAC DNA-directed RNA polymerase 3A, chloroplastic; TrEMBL-Plants: tr|K7KWI1|K7KWI1_SOYBN DNA-directed RNA polymerase; Found in the gene: LotjaGi6g1v0200900 | 19 | ||
– | Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp|Q0WT48|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr|A0A151R9V4|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000 | 26 | ||
– | Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp|Q0WT48|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr|A0A151R9V4|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000 | 26 | ||
– | Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp|Q0WT48|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr|A0A151R9V4|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000 | 26 | ||
– | Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp|Q0WT48|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr|A0A151R9V4|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000 | 26 | ||
– | Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp|Q0WT48|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr|A0A151R9V4|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000 | 26 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 1.32 |