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GO:0000987

View this GO term in other databases

Overview

Field Value
Namespace Molecular function
Short description Proximal promoter sequence-specific DNA binding
Full defintion Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter. The proximal promoter is in cis with and relatively close to the core promoter.
Subterm of

Relationships

The relationship of GO:0000987 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCtxnOH

Associated Lotus transcripts 28

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0256589.1
– PREDICTED: agamous-like MADS-box protein AGL80-like [Cicer arietinum] gi|502129875|ref|XP_004500454.1|
GO terms
3
Lj0g3v0271989.1
– PREDICTED: agamous-like MADS-box protein AGL80-like [Cicer arietinum] gi|502129895|ref|XP_004500461.1|
GO terms
3
Lj0g3v0294559.1
– PREDICTED: agamous-like MADS-box protein AGL16-like [Cicer arietinum] gi|502093308|ref|XP_004489898.1|
GO terms
3
Lj0g3v0294569.1
– PREDICTED: agamous-like MADS-box protein AGL16-like [Cicer arietinum] gi|502093308|ref|XP_004489898.1|
GO terms
3
Lj1g3v1913900.1
– Pheres1 [Medicago truncatula] gi|357491487|ref|XP_003616031.1|
GO terms
3
Lj1g3v2809220.1
– PREDICTED: agamous-like MADS-box protein AGL80-like [Cicer arietinum] gi|502129872|ref|XP_004500453.1|
GO terms
3
Lj1g3v3466130.1
– PREDICTED: agamous-like MADS-box protein AGL80-like [Cicer arietinum] gi|502118503|ref|XP_004496299.1|
GO terms
3
Lj1g3v3476150.1
– PREDICTED: agamous-like MADS-box protein AGL80-like [Cicer arietinum] gi|502118503|ref|XP_004496299.1|
GO terms
3
Lj4g3v1335440.1
– PREDICTED: agamous-like MADS-box protein AGL61-like [Fragaria vesca subsp]. vesca] gi|470116765|ref|XP_004294548.1|
GO terms
3
Lj5g3v2258490.1
– PREDICTED: MADS-box transcription factor PHERES 2-like [Cicer arietinum] gi|502180646|ref|XP_004516685.1|
GO terms
3
Lj6g3v0408380.1
– PREDICTED: agamous-like MADS-box protein AGL80-like [Cicer arietinum] gi|502137801|ref|XP_004503191.1|
GO terms
3
LotjaGi1g1v0163000.1
– MADS-box transcription factor family protein; TAIR: AT5G55690.1 MADS-box transcription factor family protein; Swiss-Prot: sp|Q9FIM0|AGL82_ARATH Agamous-like MADS-box protein AGL82; TrEMBL-Plants: tr|A0A151RE42|A0A151RE42_CAJCA MADS-box transcription factor PHERES 2; Found in the gene: LotjaGi1g1v0163000
GO terms
3
LotjaGi1g1v0163000.2
– MADS-box transcription factor family protein; TAIR: AT5G55690.1 MADS-box transcription factor family protein; Swiss-Prot: sp|Q9FIM0|AGL82_ARATH Agamous-like MADS-box protein AGL82; TrEMBL-Plants: tr|A0A151RE42|A0A151RE42_CAJCA MADS-box transcription factor PHERES 2; Found in the gene: LotjaGi1g1v0163000
GO terms
3
LotjaGi1g1v0386900.1
– AGAMOUS-like MADS-box protein; TAIR: AT1G31640.1 AGAMOUS-like 92; Swiss-Prot: sp|Q9C6V4|AGL92_ARATH Agamous-like MADS-box protein AGL92; TrEMBL-Plants: tr|A0A072UXE2|A0A072UXE2_MEDTR MADS-box transcription factor family protein; Found in the gene: LotjaGi1g1v0386900
GO terms
3
LotjaGi1g1v0484200.1
– AGAMOUS-like MADS-box protein; TAIR: AT5G48670.1 AGAMOUS-like 80; Swiss-Prot: sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80; TrEMBL-Plants: tr|A0A1J7GZY2|A0A1J7GZY2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0484200
GO terms
3
LotjaGi1g1v0583800.1
– MADS-box transcription factor family protein; TAIR: AT3G05860.2 MADS-box transcription factor family protein; Swiss-Prot: sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80; TrEMBL-Plants: tr|G7JY85|G7JY85_MEDTR MADS-box transcription factor family protein; Found in the gene: LotjaGi1g1v0583800
GO terms
3
LotjaGi1g1v0584000.1
– MADS-box transcription factor family protein; TAIR: AT3G05860.2 MADS-box transcription factor family protein; Swiss-Prot: sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80; TrEMBL-Plants: tr|G7JY85|G7JY85_MEDTR MADS-box transcription factor family protein; Found in the gene: LotjaGi1g1v0584000
GO terms
3
LotjaGi4g1v0092300.1
– AGAMOUS-like MADS-box protein; TAIR: AT5G48670.1 AGAMOUS-like 80; Swiss-Prot: sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80; TrEMBL-Plants: tr|A0A1J7FS39|A0A1J7FS39_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0092300
GO terms
3
LotjaGi4g1v0092400.1
– AGAMOUS-like MADS-box protein; TAIR: AT5G48670.1 AGAMOUS-like 80; Swiss-Prot: sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80; TrEMBL-Plants: tr|A0A1J7FS39|A0A1J7FS39_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0092400
GO terms
3
LotjaGi4g1v0092500.1
– AGAMOUS-like MADS-box protein; TAIR: AT5G48670.1 AGAMOUS-like 80; Swiss-Prot: sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80; TrEMBL-Plants: tr|A0A1J7FS39|A0A1J7FS39_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0092500
GO terms
3
LotjaGi4g1v0092600.1
– AGAMOUS-like MADS-box protein; TAIR: AT5G48670.1 AGAMOUS-like 80; Swiss-Prot: sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80; TrEMBL-Plants: tr|A0A1J7FS39|A0A1J7FS39_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0092600
GO terms
3
LotjaGi4g1v0092700.1
– AGAMOUS-like MADS-box protein; TAIR: AT5G48670.1 AGAMOUS-like 80; Swiss-Prot: sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80; TrEMBL-Plants: tr|A0A1J7FS39|A0A1J7FS39_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0092700
GO terms
3
LotjaGi4g1v0250100.1
– MADS-box transcription factor family protein; TAIR: AT1G18750.4 AGAMOUS-like 65; Swiss-Prot: sp|Q7X9I0|AGL65_ARATH Agamous-like MADS-box protein AGL65; TrEMBL-Plants: tr|A0A0S3R7D7|A0A0S3R7D7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0250100
GO terms
3
LotjaGi4g1v0250100.2
– MADS-box transcription factor family protein; TAIR: AT1G18750.4 AGAMOUS-like 65; Swiss-Prot: sp|Q7X9I0|AGL65_ARATH Agamous-like MADS-box protein AGL65; TrEMBL-Plants: tr|A0A0S3R7D7|A0A0S3R7D7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0250100
GO terms
3
LotjaGi4g1v0352000.1
– AGAMOUS-like MADS-box protein; TAIR: AT5G48670.1 AGAMOUS-like 80; Swiss-Prot: sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80; TrEMBL-Plants: tr|G7JY85|G7JY85_MEDTR MADS-box transcription factor family protein; Found in the gene: LotjaGi4g1v0352000
GO terms
3
LotjaGi5g1v0163000_LC.1
– AGAMOUS MADS box factor transcription factor; TAIR: AT5G55690.1 MADS-box transcription factor family protein; Swiss-Prot: sp|Q9FIM0|AGL82_ARATH Agamous-like MADS-box protein AGL82; TrEMBL-Plants: tr|A0A1J7I5B9|A0A1J7I5B9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0163000_LC
GO terms
3
LotjaGi6g1v0042500.1
– AGAMOUS-like MADS-box protein; TAIR: AT5G48670.1 AGAMOUS-like 80; Swiss-Prot: sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80; TrEMBL-Plants: tr|A0A1J7FS39|A0A1J7FS39_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0042500
GO terms
3
LotjaGi6g1v0054200.1
– AGAMOUS-like MADS-box protein; TAIR: AT5G48670.1 AGAMOUS-like 80; Swiss-Prot: sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80; TrEMBL-Plants: tr|V7D1F9|V7D1F9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0054200
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0045944
Biological process Positive regulation of transcription by RNA polymerase II 1 3.57