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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0509400 |
| Transcript ID | LotjaGi3g1v0509400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ribosomal RNA large subunit methyltransferase E; TAIR: AT4G25730.1 FtsJ-like methyltransferase family protein; Swiss-Prot: sp|Q5BH88|SPB1_EMENI AdoMet-dependent rRNA methyltransferase spb1; TrEMBL-Plants: tr|G7JTV9|G7JTV9_MEDTR Putative rRNA methyltransferase; Found in the gene: LotjaGi3g1v0509400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92647621..92655438) extracted from Lotus japonicus Gifu genome v1.2.
CGAAACTTGATTGAAAAGAAACCATTATATTCATTCATTCTATTTATTCTGTTTTCTTACAGAAAAACCCTAATTGAAAC CTAGACGGTGACGAACAAGGAGCTGAGAGTTGAAACATGGGGAAAGCGAAAGCGAAGGGGAAGCACCGTTTGGACAAGTA CTATCACCTAGCCAAAGAACACGGTTACAGGTCCAGAGCTTCATGGAAGCTAATCCAGCTCAACTCCAAGTTCCGCTTCC TCGAATCCGCACACTCCGTACTCGATCTCTGCGCCGCCCCCGGTGGTTGGATGCAGGTCGCCGTCCAGCGCGTCCCCGTC GACCACCTCGTCATCGGCGTTGATCTCGCCCCTATCGCCCCTGTCCGCGGTGCCATCGCTATACAAGAGGATATCACCAA GACCGAGTGCAGGTCCCGCATCAAGAAGCTCATGAATGACAACCGCTGCGCCGCCTTCGACGTTATTCTCCACGACGGTT CGCCCAACGTCGGTGGTGCATGGGCTCAGGAAGCTACGTCGCAGAACGCTCTTGTTATTGATGCTGTCAAGTTGGCTACA CAGTTCTTAGCCCCCAAGGGCACGTTCGTCACTAAGGTTTTTGCATAGTTGCAAATCATTTTTTCTAGTTAATGTTAATT GTTCATGGTTATTGCTCATTCTGATTGTTGTTACTGTTGCTTTGTTGTTGTGTGATAGATTTTCAGGTCGCAGGATTACA GTTCTGTTGTGTATTGTTTGAAGCAGGTGATAATTGTTTTTTTTTTTGAATGAATGAATGGTACTGTATGTGTTTGTTTT TTTTTTGTGGTAGAATTTAATGTGAATGTTGGGATGTTTGTATTTGCAGTTGTTTGAAAAGGTTGAGGTGGATAAACCAG CTGCTAGTCGTTCTGAGTCTGCTGAGATATATGTTTTGGGCCTTAAGTATAAGGCCCCGGCTAAGATTGATCCGCGCCTT CTCGATGTCAAGCATCTCTTTCAGGGTTCTGCGCAACCACAGGCTAAGGTAATTTCTTTTTTCAGTTCGGGGATGTTGGG TTGGCTATGTATGTATGTATGTGTTTTTTACTCGGTTCCTCTGATTTAATCTGTTGTGGAATCATTTATGCAGGTGGTGG ATGTACTTAGAGAAAATAAGCAAAAGAGGCATCGGGATGGGTAACTATGGCACTCCTTATTTACATTACATGTTTTGTCT TATTGGTATATTATTGATTTTAGCATGCTTTCTCAAATGGTTCTAGTCTTCATCTTGAAATGGAGGATGATTGTAATTTT TCATCTGGTAGATTGGCCATGAGTAATCTTGCATAAGAATCTAATTTTTAAGATTGTTAAGGTATCCTGACTCCTAGGAA ACAGAGATTATGCAAGATTATGAAAAATTAGTTTAACTATTTGAGCTGATTAGATACCCCAACAAGAAACACCTTTTGTG TTTTTCTTCAACTATGGTATTCGTTGTTGTTAACTACGTAATGTCTTACAGCTATGAAGATGGAGTCTCGACTTTACGGA AGGTGTCTTCAGCTGCAGATTTCATTTGGTCAGCTTCTCCTTTGGAGGTCCTTGGTTCTGTTACGTCCATAACCTTCAAT GACCCAGCTGATTTACCAATTAAGAATCATGACTTAACAACTGAAGAGGTATTTTTGGGTATTTACAATTTGTTCATGCA TTTTTTTAGCAACAAGGGGGTTTGAACATTATCAATGTTATTTTTTATTAAATGGTTTGAATGCTATTGCATGGCAGGTA AAATCTCTCTGCGATGACTTGAGAGTTTTGGGGAAGCAGGACTTCAAGCATCTTCTGAAGTAATTGCATGGCTTGATCTT CACTTGTGATTTCTGACATTTTTGAAACATGATCCGTACTGAATATATTTTTTTTCTTTTTTTGTGTGGATTGTGAAGGG ATTAATTTTATATCTACTTACATGCAGGTGGCGAATTCACATTAGGAAAGCTCTTTCACCTGATAAAAAGCCGGAACCTA CTACTAAAGCAGAGATGGAAAATGAGCATATAGTGGATGAAGATGATAGAATACTTAATGAAATGGAGGAGTTGACACAT GCAGTGGACCGCAAGAAAAAACGTGAAAAAAAGCTTCTTGCAAAAAGAAGAGCTAAGGTTTCTGGTTTCTTATTTGCCAC TGAATAAGTTGGGATTCAATACATGAATAAGTTGTTATCTGTGCAATATGATTGTTAATATTTATCAGCACTTCTGCAGA CTACAGTAGTTTACATGATTTCAAAATTGTACATGTTTGGTCCTACAAGTGATGTCTGTGCATGCCTAGGTTCTTCATGA CATTTTAAGTCTAATTCTATTTCTAAATCCTTTTTTAGCAGACGAGTTCCAGCTGATTCATTGCTTTTTTAATCGTTTGA ATTTTATAGGATAAGGCCCGCAAAGCAACAGGGATGCAAACGGATGCAATAGAAGATGGTTATGTTGATCATGAGTTGTT TTCTCTTTCATCTATCAAGGTTTGCTTAATGTTTTAGTTTCTCTAGGTTTAGAATTTGGTATTATCCTGTTAAACTGGAA CGGTTGATTTTTCATTCCAAACTCATTTTCCACTTCTTTGAAAGTGCCATTTTTTGTAACGATGTATTCCAGAAAAATTA CTTTTCCTTTATAACTGGGATCTGTAGCAAGCAAATTGTCTGCCGCAGCATTCCTTCATACAGAAATCAGGAAGATATAT CTTACCTTTTGGTTTCCGTTTTTTTCCTGCTCCTTTAATGGAATACATCAAGCTGTGTAACTATGGTATCTTGTATGAAT TTTAATAATGTTTCATCTTGATAGGAGTAACTTTGTCAAGTTTGCTTTAATTTTTTTTCTCTTGGCTTTTATTTCAGGGT AAGAAGGATCTGGTCACTGTTGATACCACTGAATATGAAGGGGATGAGGGTGAAGTGGAAGACAGTGAAAATGAAGATAT CAATGAAGGCTCAGAGCATTCATCCAGTGACTTAGATTCTGATGAAGAACGCAAAAGGTGATTGATAGGTTCTTTTGATT TAGTTCAGCATGTTCAGATATTTAACCACTCATAGTCTTGTTTTTTGGTCTTGTATTTATTGCTTGTCTTGATATCTAAC CAATCCATCTGGTACACCTAAGCTTTTACTTAATAGCAAGAGTGAAGATGGCTCCTCTATTCCTTTTTTATAAGTCTTTT TTAGCAAATTCACAAAGATTAAAAAAGTTACATCTTGAATATATCTAAATTATCTATAACTTTCCAAAATTAACCTTATC TTAAAATCTCTCTGCCCTTCTTAATTATCTCTTAATCAATTCATTATTATCTCCACCTTAATTACTAATTCCATTCTCTC AATTTGCAAAATGATATTTCCGCTTGCAACTTCTACTTCATTGTTAATATCCACTCACCCCAATTGTACAATAGTTCCTA CTTATCATTATTGATTTATCTTCAATAAAAAAACACTTAAGCTGACTACAAACTACTCTCATGTTGGTATACCAAAAATT TACTGAAAAGTGTAGAGAAGTTAAATGTGAATATTACGGGCGAACTTATAAAATATTACGTTTTATAAGTCACACCCTGG AAGCTTTTGGTGTTCCTTCATTTAAGTCACTTCAGAAAATACCTAAAGTTTCTAGAGTGTGACTTATAGAAAGTAATGTA GTGAGTAGTTACAAGTGGTTACATTAGGAGTTAAGGAAGTTAGGCTGTTAAACGAGGGAAATTATTAGAGAAGCATAGAG GAGAGAATTAATGGAGCTGGGGTATTCTCAGGTGGAAAGGAGATGCCCCTTGTAAGAGGATTCTTCCTCTTGTTTCTCTC TTCTGAATAATGCAAATCAATATTTCTCACGCCTGTTCCTACCCTATTTTCTCCACTGTTCTACTCTGTTGATCTGGAAC CTAATGGTATCCTCATATCAGATATGATGAGCAAATGGAAAATTTACTTGAGCAAGCATATGAGCGGTTTGTGGTCAGAA AGGATGGAAGTACAAAGCAGCGGAAGCGGATTAAGAAATCATATGATGCAGAGACCCAACTTTTGGAGGTATGGAGATTT CTTTCTTGTAATTGTTATTTGGGATTTACATGAAAGGGAAGAAAAACCCTTATTTCAATCATTTTCTATTCCTATTCTCT TACTTATAATTTTCTTTAATTTGTTACCTTTTTGTCCCATTGAGGTTCAAAGTTCAAACATACCCTCTCTGTCAAGTTCT TATTATGCATCTTACTGATATAAGAATTCATGTTGATATGGTTATTTTGTCTACATTCCCTGAAGTTTTTGTTGACATCA CTTCACGATTGGTATTGTTGTGGTGTGAGAAATATTTTCAGTTAATTGTTTAGATCTGTGGAAGGGTGCATTCCCTCTCT CTCTCTCTCTCTTGTGGGCATAAAGAAATCTTTTACTTGCTGATCATGGTTTTTTGGTTGTGCAGGCTGGTGAGGATGAT GGCATTATTCAGTCTAAATACGATTCTGATGAAGACCAGGATGATCAAGAAGCAAATCCCTTGGTGGTACCCCTTAATGA TGGGGCAGAGCCCACCCAAGAGGAGATTACTGATAAATGGTTTAGTCAGGATGTCTTTGCTGAAGCTGTAGAGGAAGGAG ACTTTGACAAGGACGAGAGTGAAGATGAAATGGATATTGATGAGCGTAAGGAGAAGACGGAGAAGACTGCTGTTGCAAAA AAGGTCAAAGAAAATAAAACAACAGCGTTTGCCGAGATAGATCACCCTAAATCTCAAGCATCTAAGGCAGAGGATTTTGA GGTTGTTAAGGAGCCTGCTACTGATTCCGGCAGTGATGATTCAAGCGATGATTCATCAGATGTACCCAAAGCTGAGACAT TGGCTTGTGCTAAGAAAATGCTGAGAAAAAAGCAACGAGAGCAGATACTAGATGACGCATATAATAAGTACATGTTTGAT GATGATGGATTGCCCAAGTGGTTTCTAGATGACGAAAAGAAGCACCGCCAACCAATGAAGCCGGTCACTAAAGAGGAAGT TAATGCAATGAAAGCACAATTTAAAGAAATCAATGCTCGGTCATCAAAGAAGGTGGCCGAGGCCAAAGCACGGAAGAAGC GTGTGCAGATGAGGAAGCTTGAGAAAGTACGTAAGAAGGCCAATGCTATATCAGATCAGACAGAAATATCTGATTTTTCG AAGACGAAGCAAATTGAAAAACTATATAGAAAGGCTGATCCGAAGAGGCCTAAAAAAGAATATGTCGTTGCAAAGAAAGG TGTCCAAGTTAGGACTGGCAAGGGGAAAGTCCTTGTTGATCGCAGAATGAAGAAGGATGCTAGGAAACATGGAATGAACA AGACAGGAAAAGGAGGTTCCAAAAACGGTAAAGGTAAGGCTCCGAAGGGCAAAGGATCTTCAAAGGGATCTTCAAAGGCT TCTGCACAGAAGGGAAGGAAGGGGAATAAGTGAAAATAGATTGATTTATCCGTCAAACGTTGTCTTGTTTTCCTGGCTCA ATTTTGTTCGCTCATTTTTGTTTACGTGTTATTGTGCGACTGATAATATAAATTACAGAGTTGTTTTTTTCTTCACAAGG ACAAGGAATTGATTGGGAGGCCCAGTTTTGAACAGTTTTACCCAAACATTCAATCATATTATTCTATGTAGAAGGAACAA TTACATTGGTTTTTAATTTGAATTAAATTAAAAATAAAAATTTCTGATTTTACAGAAATTATGTGTCTTGGTAAACCACA CTACCACTCGTGACGGCTTTGGCAACAAGTATAGACTAGTAACATGAATTAATTTCGTAATCTAGGAAAATTTAGCTCAT GGCATGTGTTTTGTTCTTTTTTTTTTAATGGAGCAGATTTTGCATTTAGAAGTAGAACAGCTTACTTTCCAAAAGAAATT CAAATGATGAACAACAGAATGATCAGAGTGCAGACCAATGGAAAAAATAATATCTATTAGAACTCTATTTTTCACTCATT TCCTAATTATACTATCTTTTAAGAAAGTCTGGGAAATAATAATAATTTGTTGCATTAAAGCCTCTAGGGTGAGTAAGTAC TACTAAGAAAGGGGAGGGGAAATATAAGGGAGATCATTTGCCAGGAGCTGGGCCAACAAGTTTCATCCATCGCTGTTGTC TTTTTGTAAGTCCAGCACTGTTGATTAAGGGCAATGGTATTACAATACTATCAACTTAATTTATTTTAAACTCAAAATGG ACAAATAAGTTAGCATTACAAAAGTTCTGAATTGTTTTTTTTTTTCCCTCAGACAAATTGATCAAGGAGCTCATCCACAG TGGTGTACTTAACATCTGGATAGAGCGATGATGCTTCTACTCCAAAGGATTGCTCAATTTCAAAGTTGGTTTGATCTCCT TTCACATAGACAGCATGACTGATTGCCAGCATCACACTGTTGGGTACAGGGGACTCTGTAAAATCAAGCATATATTAAAC AGGTACTTAGAGAAGTACTTTGAAAAGAATTGGTTATACAGTAAAAAACTATATGAAACTGCAAAAGAAAAAAGAAGAAA ATTGGTTTACATAGTAAACTAATAATGTTTGTTGTACACCATTTTGGTGCAGACACCTAGAGTGAGATACGAGAAGAAAA TAAATAAGTGATAGATGTGATGTGATACGAAAATAGAGAGAGGGGAAAAAGTGGTGCTTGTGGGTGTTTACACTGTTTTT CACCTTACCAATCGGGAGTGTATAGTAAAACACTAAAACATGTTAATAGTATAGTATTTAATAATTTTCCACTACTGAAA AGTTCTAATCAGTAAAGGAAGCATTCATCTTCAACTTACTAATAACAAATAAAACAATGTTTAATAATTTCATTAACTAA CCTTTAATTTGCTTCAAGACTTGATCCTCAGGAACATAGACTCTTTCAAGAGTCTTACCAATTTTCTTCTCCCAAAGAGA AACCAGGTCATTAAATGACAAGGTGTTGGCTGGAGGTCTGATGTATAGGATCTTGTTCAAGGTTCTTGGATCACTAACAG CTCTGATGGTATAGGTGCCAATGTCATCTTCCTTGTTAAAAACACCTGTTTAACCAAGCAAAGTTTAATAATAGGTAGAT TAGTAGATAGACCTATGTACATGTAAATTTATGACGTGTTTGGTTTCACTTCTGGAAACCACATGTAACAGAAAACCATG TTGAATCACACGCTACAATGTGTAGCTTTTAAAATAACGTGTTTTGGAGTGTGTGTTATGAACATCCACACACTTGGAGG GTGTGTCATAAACATCCACACATGCTGAAAATATATTATGCAAAACTGTTAGGATGTAAGAGAAGGGAAAATTAGTTAGG GGCTTCTATAGTAGTCAGTGGTTGTGTGAATCAGATTAGAGAAGACATTCTGCATAATTGTAAGTTTGAGAGTTAAAGGA GAGATCCTCTGAGAAGGGGAAACCCTTGGGGAGAATTCATTCTCCATTTCTGTATGTGATTTTCAATAATACAATTCCAT TCTTTCAATCAATATTTCATCTTCAATTTCTGGTTCCTATAAAAAACTGTGATCTTACATTTGGGGTTTCCATCCCCTAG GATAACTACTTTATCCCTTGGGGGAGTTGTGACTCCAGGCTGTGACAAAGTGGACAGGAAGTAACTAGCAAAAAAGTTGC AGGACACAATGGTGTGGGGAATTCCTTCCGCCTCAATGGCTCTGCGAACATTGACCTTCACCTGGTATGTGCTCTTTGCC GGATCCACGGCATGAGTCCGGTCCACATCATTCCCAAACTCTGAAGGAAAGAATCTCT
CDS sequence (LotjaGi3g1v0509400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAAGCGAAAGCGAAGGGGAAGCACCGTTTGGACAAGTACTATCACCTAGCCAAAGAACACGGTTACAGGTCCAG AGCTTCATGGAAGCTAATCCAGCTCAACTCCAAGTTCCGCTTCCTCGAATCCGCACACTCCGTACTCGATCTCTGCGCCG CCCCCGGTGGTTGGATGCAGGTCGCCGTCCAGCGCGTCCCCGTCGACCACCTCGTCATCGGCGTTGATCTCGCCCCTATC GCCCCTGTCCGCGGTGCCATCGCTATACAAGAGGATATCACCAAGACCGAGTGCAGGTCCCGCATCAAGAAGCTCATGAA TGACAACCGCTGCGCCGCCTTCGACGTTATTCTCCACGACGGTTCGCCCAACGTCGGTGGTGCATGGGCTCAGGAAGCTA CGTCGCAGAACGCTCTTGTTATTGATGCTGTCAAGTTGGCTACACAGTTCTTAGCCCCCAAGGGCACGTTCGTCACTAAG ATTTTCAGGTCGCAGGATTACAGTTCTGTTGTGTATTGTTTGAAGCAGTTGTTTGAAAAGGTTGAGGTGGATAAACCAGC TGCTAGTCGTTCTGAGTCTGCTGAGATATATGTTTTGGGCCTTAAGTATAAGGCCCCGGCTAAGATTGATCCGCGCCTTC TCGATGTCAAGCATCTCTTTCAGGGTTCTGCGCAACCACAGGCTAAGGTGGTGGATGTACTTAGAGAAAATAAGCAAAAG AGGCATCGGGATGGCTATGAAGATGGAGTCTCGACTTTACGGAAGGTGTCTTCAGCTGCAGATTTCATTTGGTCAGCTTC TCCTTTGGAGGTCCTTGGTTCTGTTACGTCCATAACCTTCAATGACCCAGCTGATTTACCAATTAAGAATCATGACTTAA CAACTGAAGAGGTAAAATCTCTCTGCGATGACTTGAGAGTTTTGGGGAAGCAGGACTTCAAGCATCTTCTGAAGTGGCGA ATTCACATTAGGAAAGCTCTTTCACCTGATAAAAAGCCGGAACCTACTACTAAAGCAGAGATGGAAAATGAGCATATAGT GGATGAAGATGATAGAATACTTAATGAAATGGAGGAGTTGACACATGCAGTGGACCGCAAGAAAAAACGTGAAAAAAAGC TTCTTGCAAAAAGAAGAGCTAAGGATAAGGCCCGCAAAGCAACAGGGATGCAAACGGATGCAATAGAAGATGGTTATGTT GATCATGAGTTGTTTTCTCTTTCATCTATCAAGGGTAAGAAGGATCTGGTCACTGTTGATACCACTGAATATGAAGGGGA TGAGGGTGAAGTGGAAGACAGTGAAAATGAAGATATCAATGAAGGCTCAGAGCATTCATCCAGTGACTTAGATTCTGATG AAGAACGCAAAAGATATGATGAGCAAATGGAAAATTTACTTGAGCAAGCATATGAGCGGTTTGTGGTCAGAAAGGATGGA AGTACAAAGCAGCGGAAGCGGATTAAGAAATCATATGATGCAGAGACCCAACTTTTGGAGGCTGGTGAGGATGATGGCAT TATTCAGTCTAAATACGATTCTGATGAAGACCAGGATGATCAAGAAGCAAATCCCTTGGTGGTACCCCTTAATGATGGGG CAGAGCCCACCCAAGAGGAGATTACTGATAAATGGTTTAGTCAGGATGTCTTTGCTGAAGCTGTAGAGGAAGGAGACTTT GACAAGGACGAGAGTGAAGATGAAATGGATATTGATGAGCGTAAGGAGAAGACGGAGAAGACTGCTGTTGCAAAAAAGGT CAAAGAAAATAAAACAACAGCGTTTGCCGAGATAGATCACCCTAAATCTCAAGCATCTAAGGCAGAGGATTTTGAGGTTG TTAAGGAGCCTGCTACTGATTCCGGCAGTGATGATTCAAGCGATGATTCATCAGATGTACCCAAAGCTGAGACATTGGCT TGTGCTAAGAAAATGCTGAGAAAAAAGCAACGAGAGCAGATACTAGATGACGCATATAATAAGTACATGTTTGATGATGA TGGATTGCCCAAGTGGTTTCTAGATGACGAAAAGAAGCACCGCCAACCAATGAAGCCGGTCACTAAAGAGGAAGTTAATG CAATGAAAGCACAATTTAAAGAAATCAATGCTCGGTCATCAAAGAAGGTGGCCGAGGCCAAAGCACGGAAGAAGCGTGTG CAGATGAGGAAGCTTGAGAAAGTACGTAAGAAGGCCAATGCTATATCAGATCAGACAGAAATATCTGATTTTTCGAAGAC GAAGCAAATTGAAAAACTATATAGAAAGGCTGATCCGAAGAGGCCTAAAAAAGAATATGTCGTTGCAAAGAAAGGTGTCC AAGTTAGGACTGGCAAGGGGAAAGTCCTTGTTGATCGCAGAATGAAGAAGGATGCTAGGAAACATGGAATGAACAAGACA GGAAAAGGAGGTTCCAAAAACGGTAAAGGTAAGGCTCCGAAGGGCAAAGGATCTTCAAAGGGATCTTCAAAGGCTTCTGC ACAGAAGGGAAGGAAGGGGAATAAGTGA
Protein sequence (LotjaGi3g1v0509400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKAKAKGKHRLDKYYHLAKEHGYRSRASWKLIQLNSKFRFLESAHSVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPI APVRGAIAIQEDITKTECRSRIKKLMNDNRCAAFDVILHDGSPNVGGAWAQEATSQNALVIDAVKLATQFLAPKGTFVTK IFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLKYKAPAKIDPRLLDVKHLFQGSAQPQAKVVDVLRENKQK RHRDGYEDGVSTLRKVSSAADFIWSASPLEVLGSVTSITFNDPADLPIKNHDLTTEEVKSLCDDLRVLGKQDFKHLLKWR IHIRKALSPDKKPEPTTKAEMENEHIVDEDDRILNEMEELTHAVDRKKKREKKLLAKRRAKDKARKATGMQTDAIEDGYV DHELFSLSSIKGKKDLVTVDTTEYEGDEGEVEDSENEDINEGSEHSSSDLDSDEERKRYDEQMENLLEQAYERFVVRKDG STKQRKRIKKSYDAETQLLEAGEDDGIIQSKYDSDEDQDDQEANPLVVPLNDGAEPTQEEITDKWFSQDVFAEAVEEGDF DKDESEDEMDIDERKEKTEKTAVAKKVKENKTTAFAEIDHPKSQASKAEDFEVVKEPATDSGSDDSSDDSSDVPKAETLA CAKKMLRKKQREQILDDAYNKYMFDDDGLPKWFLDDEKKHRQPMKPVTKEEVNAMKAQFKEINARSSKKVAEAKARKKRV QMRKLEKVRKKANAISDQTEISDFSKTKQIEKLYRKADPKRPKKEYVVAKKGVQVRTGKGKVLVDRRMKKDARKHGMNKT GKGGSKNGKGKAPKGKGSSKGSSKASAQKGRKGNK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Hamap | 1 | 802 | 802 | 19.835 | ||
| PANTHER | 5 | 805 | 801 | 0.0 | – | |
| PANTHER | 5 | 805 | 801 | 0.0 | – | |
| Hamap | 8 | 204 | 197 | 28.903 | ||
| Gene3D | 20 | 210 | 191 | 3.1E-59 | – | |
| SUPERFAMILY | 23 | 204 | 182 | 2.72E-32 | ||
| Pfam | 24 | 202 | 179 | 1.0E-51 | ||
| Pfam | 237 | 385 | 149 | 3.7E-44 | ||
| Coils | 357 | 377 | 21 | - | – | |
| MobiDBLite | 361 | 389 | 29 | - | – | |
| MobiDBLite | 367 | 384 | 18 | - | – | |
| MobiDBLite | 422 | 439 | 18 | - | – | |
| MobiDBLite | 422 | 464 | 43 | - | – | |
| MobiDBLite | 440 | 464 | 25 | - | – | |
| MobiDBLite | 479 | 497 | 19 | - | – | |
| MobiDBLite | 479 | 636 | 158 | - | – | |
| MobiDBLite | 554 | 570 | 17 | - | – | |
| MobiDBLite | 571 | 632 | 62 | - | – | |
| Pfam | 606 | 796 | 191 | 1.1E-57 | ||
| MobiDBLite | 705 | 736 | 32 | - | – | |
| Coils | 708 | 728 | 21 | - | – | |
| MobiDBLite | 711 | 726 | 16 | - | – | |
| MobiDBLite | 756 | 770 | 15 | - | – | |
| MobiDBLite | 756 | 835 | 80 | - | – | |
| MobiDBLite | 819 | 835 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | RNA methylation | Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | RRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. | ||
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. | ||
| Molecular function | RRNA methyltransferase activity | Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule. | ||
| Biological process | RRNA methylation | The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule. | ||
| Biological process | Methylation | The process in which a methyl group is covalently attached to a molecule. |
Expression pattern of LotjaGi3g1v0509400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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