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GO:0009584

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description Detection of visible light
Full defintion The series of events in which a visible light stimulus is received by a cell and converted into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm.
Subterm of

Relationships

The relationship of GO:0009584 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0009584, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCgo_curators
ISBN

· ISBN: 0198506732

, · pages

Associated Lotus transcripts 13

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0046839.1
– PREDICTED: phytochrome type A-like [Glycine max] gi|356572880|ref|XP_003554593.1|
GO terms
3
Lj4g3v2265030.1
– Phytochrome b [Lotus japonicus] gi|121309520|dbj|BAF44083.1|
GO terms
3
Lj4g3v2295880.1
– Phytochrome E, partial [Lotus japonicus] gi|477504399|dbj|BAN14709.1|
GO terms
3
Lj5g3v1533480.1
– Phytochrome A [Lotus japonicus] gi|477504379|dbj|BAN14699.1|
GO terms
3
Lj6g3v1093490.1
– PREDICTED: phytochrome E-like [Glycine max] gi|356532946|ref|XP_003535030.1|
GO terms
3
LotjaGi5g1v0235100.1
– Phytochrome; TAIR: AT1G09570.3 phytochrome A; Swiss-Prot: sp|P93673|PHYA_LATSA Phytochrome type A; TrEMBL-Plants: tr|N0DN12|N0DN12_LOTJA Phytochrome; Found in the gene: LotjaGi5g1v0235100
GO terms
3
LotjaGi5g1v0235100.2
– Phytochrome; TAIR: AT1G09570.3 phytochrome A; Swiss-Prot: sp|P93673|PHYA_LATSA Phytochrome type A; TrEMBL-Plants: tr|N0DN12|N0DN12_LOTJA Phytochrome; Found in the gene: LotjaGi5g1v0235100
GO terms
3
LotjaGi5g1v0235100.3
– Phytochrome; TAIR: AT1G09570.3 phytochrome A; Swiss-Prot: sp|P93673|PHYA_LATSA Phytochrome type A; TrEMBL-Plants: tr|N0DN12|N0DN12_LOTJA Phytochrome; Found in the gene: LotjaGi5g1v0235100
GO terms
3
LotjaGi5g1v0235100.4
– Phytochrome; TAIR: AT1G09570.3 phytochrome A; Swiss-Prot: sp|P93673|PHYA_LATSA Phytochrome type A; TrEMBL-Plants: tr|N0DN12|N0DN12_LOTJA Phytochrome; Found in the gene: LotjaGi5g1v0235100
GO terms
3
LotjaGi6g1v0210900.1
– Phytochrome; TAIR: AT4G18130.1 phytochrome E; Swiss-Prot: sp|P55004|PHYE_IPONI Phytochrome E; TrEMBL-Plants: tr|V7AY23|V7AY23_PHAVU Phytochrome; Found in the gene: LotjaGi6g1v0210900
GO terms
3
LotjaGi6g1v0210900.2
– Phytochrome; TAIR: AT4G18130.1 phytochrome E; Swiss-Prot: sp|P55004|PHYE_IPONI Phytochrome E; TrEMBL-Plants: tr|N0DK27|N0DK27_LOTJA Phytochrome E; Found in the gene: LotjaGi6g1v0210900
GO terms
3
LotjaGi6g1v0210900.3
– Phytochrome; TAIR: AT4G18130.1 phytochrome E; Swiss-Prot: sp|P55004|PHYE_IPONI Phytochrome E; TrEMBL-Plants: tr|V7AY23|V7AY23_PHAVU Phytochrome; Found in the gene: LotjaGi6g1v0210900
GO terms
3
LotjaGi6g1v0258900.1
– Phytochrome; TAIR: AT2G18790.1 phytochrome B; Swiss-Prot: sp|P42499|PHYB_SOYBN Phytochrome B; TrEMBL-Plants: tr|A1IIA2|A1IIA2_LOTJA Phytochrome; Found in the gene: LotjaGi6g1v0258900
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0018298
Biological process Protein-chromophore linkage 1 7.69