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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0258900 |
| Transcript ID | LotjaGi6g1v0258900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phytochrome; TAIR: AT2G18790.1 phytochrome B; Swiss-Prot: sp|P42499|PHYB_SOYBN Phytochrome B; TrEMBL-Plants: tr|A1IIA2|A1IIA2_LOTJA Phytochrome; Found in the gene: LotjaGi6g1v0258900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:57180524..57188840) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGGTTTGTGACATAGATTCATTGCCTACCGCCGAAGACAATGAGGTAACCAGCACATCTTAGTTCAATAGTCGGTAA AAACAAACCACTTTCCCTTATAAAATTGTGTATTCAATTCTCGCCGATGTAAGAATTATGTCGGGGAGCGATAAGAAGCA TGTTATGTTTTGTGGTGGTGACCGGAGCCGAACTCATCGGAACTAACTTTTTGTAACAAAAGTGAGGCCATCGAGCAATC GCGGGCAAGAAAAACGCCAAATCAAAGATAGTTCCATAACACTGCTAGCTTCTGCTACTCTCCACTCTTCTCCTATCACA CTTCTTCTTCTCTGATCCTGAATTCTGATTTTCAATTTTGTGTAAAATGGCTTCAGCAAGCAGAAGAGGAGGAGGAGGAG GAGGAAGTGGTTCTGGCTCAGTAGTAGAGCGAGGAAAGGAGGAGGAGAAGTTGAAGAGAGGCGGCGGCGGCGGAGGAGGA GAATCGGTTATGATGCGGAAAGCCATCGCACAGTACACCGAAGACGCGAGGCTTCACGCCGTGTACGAGCAGTCCGGCGA GTCTTTTGACTACTCCCACTCGCTTCGTGTCACGGTGGAGTCCGTCCCGGAGCAGCAGATAACCGCTTATCTTGCTAGAA TTCAGCGCGGTGGTTACATCCAGCCGTTTGGTTGCATGATCGCCGTTGACGACCCGTCCTTCCGCCTCCTTGCTTACTCC GATAACGCCCGTGACATGCTCGGGATAACTCCGCAGTCGGTTCCTTCCATTGATGACGACTCGTCGTCTTCGTCGTTCGC GCTCGGCACCGATGTTCGTTCCTTGTTCTCTCCCTCCTCCGCGGTGCTTCTCGACAAGGCGTTCGCCGCCCGTGAGATCA GCCTCATGAACCCTCTCTGGATCCACTCTCGAACCTCCGGTAGGCCTTTCTACGGTATCCTCCACCGCGTTGATGTCGGT GTTGTTATCGATTTGGAGCCTGCTAGGTCAGACGACCCTGCGCTCTCCATCGCCGGCGCCGTACAGTCTCAGAAGCTCGC CGTTCGCGCGATCTCTCAGCTACAGTCGCTTCCCGGCGGTGATGTGAAGCTACTATGTGACGCGGTTGTGCAGAGTGTCC GGGAGCTTACTGGCTACGACAGGGTGATGGTTTACAAGTTCCATGAGGATGAGCACGGCGAGGTTGTGGCGGAGAGCAAG AGGGCAGATTTGGAGCCGTACATGGGTTTGCATTACCCTGCCACGGACATCCCTCAGGCTTCGAGGTTTTTGTTCAAGCA GAATAGGGTTAGGATGATTGTGGATTGTCATGCTAGTCCTGTGGGTGTGGTTCAGGATGAGGCTCTGATGCAGCCTCTGT GTCTGGTGGGGTCCACGCTCCGTGCTCCTCACGGTTGCCATGCTCAGTACATGGCCAACATGGGTTCTATCGCGTCGTTG GTGATGGCGGTTATCATCAATGGGAATGATGATGACGCGGTTGGGGTTGGTGGCCGGAGCTCGATGAGGCTGTGGGGGCT TGTTGTTTGTCACCACACCTCTGCTAGGTGTATCCCTTTTCCGTTGAGGTATGCTTGTGAGTTCCTCATGCAGGCTTTTG GGCTGCAGCTGAACATGGAGCTTCAGATGGCGGCGCAGTCATTGGAGAAGCGAGTTTTGAGGACGCAGACCCTGTTGTGT GACATGCTTCTCAGGGACTCTCCTGCTGGGATTGTTACTCAGAGTCCTAGTATTATGGACCTGGTTAAGTGTGATGGCGC TGCGTTGTATTGCCAAGGGAGCTACTACCCTTTGGGTGTCACCCCGAGTGAGTCTCAGATAAGGGATATCATTGATTGGT TGTTGGCCTTTCATGGTGATTCCACGGGTTTGAGTACTGATAGTTTGGCTGATGCTGGGTACCCTGGGGCTTCTTCACTT GGGGATGCGGTTTGTGGCATGGCTGTTGCTTATATAACGGAGAAGGATTTTCTTTTCTGGTTCAGATCACACACGGCGAA GGAAATAAAATGGGGTGGTGCAAAGCATCACCCGGAGGATAAGGATGATGGGCAGCGGATGCATCCCCGTTCTTCCTTCA AGGCATTTTTAGAAGTGGTGAAGAGCCGTAGTTCGCCGTGGGATAATGCGGAGATGGATGCAATTCACTCTTTGCAGCTT ATCCTGCGGGACTCATTCAAGGAGGATGAACATAGCGATTCTAAGGCTGTTGTGAACACCCATCTGGCTGAGCTAGAGTT GCAAGGGGTGGATGAACTGAGTTCCGTGGCTAGAGAGATGGTTAGGTTGATAGAAACTGCCACTGCTCCCATATTTGCCG TTGATGTTGAGGGCCACATAAATGGGTGGAATGTAAAAGTTTCAGAATTGACAGGTCTCCCAGTTGAAGAGGCAATGGGG AAGTCCTTGGTTCGTGATCTTGTGTATAAGGAGTCTGAAGAAACTGTGGACAGGCTTCTTTCTCGTGCTTTAAAAGGTAC TTATTCTAAATCTCTAGTTTTGTGGCATATTCATTTAGTTTATTGGGTAGGAGAACACTGGTTAAACCACTAGGAAGGGC ATGCCAATGTTGCCATTTTTTGTTTGCCAAAATTCTATTTAAATTGCTAACCTGATGACTAGAAGTTTAGTTGGCTTATA AAATACTTTAACTGTAGTACACAGTCAAGTCGAAAGCAATAGTTTCTAACAAGATAAATAGCTACTTTTTTCAAATTCCT GAGCACAAACTAATGGATGCACACACAATCATGCAATTAATAGTCGAGTCTTTGGTAATTCAATAATGACTGCGATGTGG GCATAGATTTCAACTGTTTTACAATGCAAAACTAATGAAAAAAGAAAAAATAAGAAGATTGTGAAAATTTTCACGGTTCA ATCTAGTGTCTTTCCATGTTGGTTAGTTAGCAGTTTTATCTATTAGTCTTAAACTATATGGTTTACTTGGTTTGAGTAGG GGGAAGTGGGAAGATAAAAAAGTTGGAATCTTGCTTAGTATAACAGAAGTATGAAATGTTGGGAAATACAATGAACTCAT ATCTTGAGTTTACTTAGTTTAGCATTAGGAGAACTAAGTTGTTGATAATTGGTTGTACAACGGCATAACTTGAGTTTAAT TAGTACAGGTGAAGAAGATAAGAATGTTGAGATAAAATTGAGGACATTTGGCCCAGAACATCAAGATAAGGCAGTTTATG TAGTGGTGAATGCTTGCTCCAGCAAGGATTATACAAATAATATAGTTGGGGTGTGCTTTGTTGGTCAGGATGTCACTGGT CAAAAAGTTGTAATGGACAAATTCATTAACATACAAGGTGACTATAAAGCTATTGTACACAGCCCAAATCCACTGATCCC TCCCATTTTTGCATCGGATGATAACACATGTTGCTTAGAGTGGAACAATGCCATGGAAAAGCTCACTGGTTGGGGTCGTG CAGATGTCATTGGAAAATTGTTAGTAGGAGAGGTTTTTGGCAGCTGCTGTCAGTTAAAGGGTTCAGATGCTATAACAAAG TTTATGATTGTCTTGCACAATGCGCTTGGTGGACAAGATACAGATAAATTCCCTTTTTCATTTCTCGACCGGCATGGAAA ATATGTGCAAACTTTCTTGACTGCAAATAAGAGGGTTAGCATAGATGGTCAGATCATTGGGGCTTTTTGCTTTTTGCAAA TTGTGAGTCCTGAACTTCAACAGGCTCTGAAGGTCCAGAAACAACAAGAGAAGAATTGCTTTGCTAGGATGAAAGAGTTA GCTTATATTTGTCAAGAAGTAAAAAATCCCTTGAGCGGGATACGCTTTACAAACTCTCTTTTGGAGGCTACAGGCTTGAC GGATGAGCAAAAACAGTTTCTTGAGACTAGTGCTGCTTGTGAGAAGCAAATGTTAAAGATAATACGGGACGTTGATCTGG AAAGCATCGAGGATGGGTGAGTTTTCTAAGCAATCATTTAAAATCTTATAATTGTGGTGGAAGTGAATGTTAGTGTTGTA ATATTTGGCTATATAAATCTGGCATCCCTCATATGAAACCTGCTAGGCTTGAAACATGACGAATTGTAGGAAAATTCAAA GTTATATTGCATTGAAATAAACCTGGTTTAGTCATTAAGTTCACTACATCGTCTTTCCCCCATATAATAATATAGTCCTA CTCCTGATACTATTAGATAATACTGACTGGTTGATGATAAAGAATGAGAACATGAGAATTCTTTTGTCTGTTAATGATGG AAAGAAATAACAAGTAGAATAATACCTTGTGTTCTCGAGAATCTAAGTAAAGCATGCTGGTACATACTCTTGATGATCAT AACAAGATGAAGATCTAATCATGTATGTTATCGTACAATTTTATTAACTAACTAATTGTTTAATTGGTAGCTTTCTTTTC TTTTGATATTGTTCGTTATAACTGAGGTTAAAAAGTCTCAGTTGATGTTATTTAGAATTTTCTAGCATTCTGCAAAATTG TGTGAAAATTAACTTAATGCAGTCAATCCAAGGTCTTTTCAAATTCTTTATTTCTGATCGGTTTTGTCCCTATCCATGTT TAATCAATGTCATGAAGTTTTGTGATGTTTTGCTTTGATCTGACAAAATACAGCAACACCCTTGATTATCAGTAGTTTGT CAAAGGTCCATGTTTTATGTGTTTGCCAATGATGTGATTGTGCATCAATATCACTTGTCTTCTATGATTCTTTTAAATAG ACTATCTCAGACAAAGCTCCCATCAATCAGATATGTATACTGCCTTCTTGGCTGGATATGTAAACTTGGCGAATCATATC TAGCATTGAGTATAACATATCAATTCTATCCTAAATTACCAGGGTTTGCTAGTAGGTTGATACTTTCATGTTTTGAGGTC TTTGATAGTTAGCTCTAGCCTGCTTATTTGATTTAATGTCCTTCTAAACTTCCTGCTTTATTTCCTGTTGTTGTTAGGTC CCTGGAGCTTGAAAGGGGAGAATTCTTGCTTGGGAATGTCATAAATGCAGTAGTTAGTCAAGTAATGGTCTTGCTAAGAG AAAGAAATCTACAGTTGATTCGTGATATTCCTGAAGAAATCAAAACATTGGCTGTTTATGGTGATCAGTTGAGGATTCAA CAAGTATTGGCTGATTTCTTATCAAATGTTGTGCGGTATGCACCATCTCCAGATGGCTGGGTAGAGACTCATGTATACCC AAAAATAAAGCAAATTTCAGACGGGCTCACCCTTCTCCATGCTGAATTTCGGTACAGTGGCATGACCCTCATGTTATCTT CATTATTTTTTTCAATGGAATAAGGTTTTATGAATGATAGTTACATCTTTGGGTTACAAGAACCTCAGGTTTACTTACTG TTTTAATATGACAATGCAATATTTGAATATTCTGAACCATTGTAATGTAGGCTGTTCTAAAATTTGAATTTCCCATTTGA ACTCACCCTTAAGAAGGAAGATACCAATACCTTTTAATTAACCATTCAGTGACTAGTAAATTGTGGATTACTGAAAAGAC CTTCCCTGTGCCTCTCTGGCTGACCATAAAAAGAGGTTTACTATTAGCATCCCTTATGTTTACTTGACATTTCACATAAT TTTTCAAAGAGATTACAGAAAAGAAGATAAAGTTGCAAATGCATTGTATCATTCCAGTTCTTAGATGTATATATATTTAA CAACTTGTAGTTTAGTGCTAAAAGAATGGTGTTTTCTGTCTTATAATTTGGGTTGGGCCTAACTCTACCCCAAAAGCTAG CTTAGAGGTGAGGGTTGATCTACCCTATATAAGGATTTATTAGTCATATCTCTAGTTAAAACAAGACTTCTTAACACATC CATCATCACGCGCAGGACTGGACATCTGCGGGTGGTCCATCCATGTATGGGTGGATTCTAATACACAGATCTAGATAAAC TCTAATACTATATTAGAATTTGGTTTAGACCTAACTTTCTGTCTAGTCAATTTTCACCTGGTTATTATTTTCAATTGGAT ACTATTTGAGAATGTTTGTTTTCTATGTTTTGCGAAGGTTGGTATGCCCTGGTGAAGGTCTTCCTTCTGAATTGGTTCAA GACATGTTTCATAACAGTCGGTGGGTGACTCAAGAAGGCCTAGGGCTATGCATGAGCAGGAAGATTCTGAAGTTAATGAA CGGCGAAGTCCAATACATCAGGGAGGCAGAACGGTGCTACTTCTTTGTTCTACTTGAACTACCGGTGACACGCAGAAGCT CTAAAGGTGTTAACTAGGTATTTTGAAACTGTAAGATTAAAGCTCAGGCAGCACCTCTCATGTTGACTGATAGATAGATT GCTGTGTCATATGCTCGGATTACACTCACCAGACAAAGCAACATAAGGTACAACCATTAGAACAGACTGACCTGGCCAGT TATCCCTGTCACAATTAATTCTTTCAAATTTGGGTTGCTATTTTTGCACCCTGACAAAACATGTTCAGTGCGGCAAGAGT GGCTAGTTAATCTGTACCTAATTGTAACCTTAAATCTTACTGATAAACTAATGGGAGAGTAGATAAAGTGCTGTGTCACC GGTATGTGTACATCTTCATGGCCAAGTGGATTTACTGCAAAACAGTCCAGGCAAAGTGCTTACTGCATTAGCAGCTGCAA TGGAAACTGCTCTTTGGATTGATCTGCATTCATCTCCTGCTCTGTTCTGAAAGTAACAGCTTACACCACTTGTTTCCATG TTTACTAATAATTGTATAATCTCTATCTGCAACAATCCGCATTGTTGCTTTTCTACTCCCCTGTCCCTACTTTACTCTTC CACCATCACCTGTACATTCCTTCCTTCTCTGTAATAAAAGCTGGTTTATCTTGTATTTTTTTGGAACTTGGTGAAAGCTA GCCATTTCTGAATAACAAATGAATATGCATTTCTCTCTTTCTTTATCTGTACTGGTGTGTGGGTGTTTGCATATTCATTT TATTCTTCAGCACATTGATAGTTGAATTAGAACCCGTTTGGAAGCAGACCAAAGAACATTTATTGGAGCTAATCTAGTGT TATTTTTAGTAGATAAGCTCTAATAAGAGTGTTATTTGGTTCATATCCAAACGGGCTTAGTCACAACTGCCAGTCCAGAA AGCACTAGTTAGTGAGTGAATATCCATAGATAACTAAAAACCAGATGTTGTTTATGATCTTGAAAGCTTGGTAGTGTTTG TTCTTGAGTTCACCATTCAAATGTCACATGTTGGAAAATTGTCCAATCATTTTACATTGTCCCATGAGGTTATATATTTT GAGAGAATAAATATACTTTTAAAATATTTCGGTGTTGCGCTGGTTTCGAATTGAGGACTTGTTGGTTGGGTGAAATTTCC AAACCAGCAAACCACTTGGGAATCTGATATACTTTATAAATATTGAAATGTAATTATTTTACAAAAATAAGATGATTCAA ATTAAGATTGTGAAACAAGATGTTAATAGCATCTCCAATGTATGCAAAAGGCAGTAAGAATTGCCTGTGAAAATAACACA CATCAGCAGACACTGTAGCACTTTGAAAAGCACCATGAATATTGAGGTTCCTAAAACTTGCTTTTTTTCATACCATGCAG CATAATGAAAAGCTTCTGCGTTAACTTTATCTGGTTATGGAGTGGAGTCGATTATTTTTGTTGAAGAAAAGGTTGCACTA CACAATGGAAGTTCATGGCCAGGTACATCTTGCCAGATAAGTTACTTTACTTTTTTGCACATGTAGCTCCCTTGAAAAAG ATATTCCATTATTTGTTTCTTTACCTGTGACATGTAGTAACCCTGAAGTCTGAACAATGAACACATATATGCATGGTCTT AAATAGATAAACATTCCATGCTACTTAACATTCTTTGTACATTATATTTTACATAGTTTTCCTTGTGAATCATTTTAATT TGGACATGGATAATCTGCTTTAATGGGAGCAAAAAGGTCAACTAGTCCACATATATGGAAACTAACCCATGTGTGAAACC TTTTAAAATTACCTTTCCTCTCATAAAAATAGCATTTGTGTGAATATCAGCTAACTATAACATGAAGAAAGTTTCATCTC AATGACTCGATCCATAAAAAAGTCATGTTCACTTTTTGTCTCAAACTTAGTGTTAATGTTTATTGTTTGCACTGATTGAA TAACCATACCAAAATCACTTCTTCTTTAAACTATATTTCCAAAAACATGAAAACATATTCCCAAACACACATACATCGCC CAAGAGTAAATAAAAAAAGAGAAAAAGCTATATTGCTGATTTGTGTTATCTGCTTGGAAGTTCATGTCCAATTACTG
CDS sequence (LotjaGi6g1v0258900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCAGCAAGCAGAAGAGGAGGAGGAGGAGGAGGAAGTGGTTCTGGCTCAGTAGTAGAGCGAGGAAAGGAGGAGGA GAAGTTGAAGAGAGGCGGCGGCGGCGGAGGAGGAGAATCGGTTATGATGCGGAAAGCCATCGCACAGTACACCGAAGACG CGAGGCTTCACGCCGTGTACGAGCAGTCCGGCGAGTCTTTTGACTACTCCCACTCGCTTCGTGTCACGGTGGAGTCCGTC CCGGAGCAGCAGATAACCGCTTATCTTGCTAGAATTCAGCGCGGTGGTTACATCCAGCCGTTTGGTTGCATGATCGCCGT TGACGACCCGTCCTTCCGCCTCCTTGCTTACTCCGATAACGCCCGTGACATGCTCGGGATAACTCCGCAGTCGGTTCCTT CCATTGATGACGACTCGTCGTCTTCGTCGTTCGCGCTCGGCACCGATGTTCGTTCCTTGTTCTCTCCCTCCTCCGCGGTG CTTCTCGACAAGGCGTTCGCCGCCCGTGAGATCAGCCTCATGAACCCTCTCTGGATCCACTCTCGAACCTCCGGTAGGCC TTTCTACGGTATCCTCCACCGCGTTGATGTCGGTGTTGTTATCGATTTGGAGCCTGCTAGGTCAGACGACCCTGCGCTCT CCATCGCCGGCGCCGTACAGTCTCAGAAGCTCGCCGTTCGCGCGATCTCTCAGCTACAGTCGCTTCCCGGCGGTGATGTG AAGCTACTATGTGACGCGGTTGTGCAGAGTGTCCGGGAGCTTACTGGCTACGACAGGGTGATGGTTTACAAGTTCCATGA GGATGAGCACGGCGAGGTTGTGGCGGAGAGCAAGAGGGCAGATTTGGAGCCGTACATGGGTTTGCATTACCCTGCCACGG ACATCCCTCAGGCTTCGAGGTTTTTGTTCAAGCAGAATAGGGTTAGGATGATTGTGGATTGTCATGCTAGTCCTGTGGGT GTGGTTCAGGATGAGGCTCTGATGCAGCCTCTGTGTCTGGTGGGGTCCACGCTCCGTGCTCCTCACGGTTGCCATGCTCA GTACATGGCCAACATGGGTTCTATCGCGTCGTTGGTGATGGCGGTTATCATCAATGGGAATGATGATGACGCGGTTGGGG TTGGTGGCCGGAGCTCGATGAGGCTGTGGGGGCTTGTTGTTTGTCACCACACCTCTGCTAGGTGTATCCCTTTTCCGTTG AGGTATGCTTGTGAGTTCCTCATGCAGGCTTTTGGGCTGCAGCTGAACATGGAGCTTCAGATGGCGGCGCAGTCATTGGA GAAGCGAGTTTTGAGGACGCAGACCCTGTTGTGTGACATGCTTCTCAGGGACTCTCCTGCTGGGATTGTTACTCAGAGTC CTAGTATTATGGACCTGGTTAAGTGTGATGGCGCTGCGTTGTATTGCCAAGGGAGCTACTACCCTTTGGGTGTCACCCCG AGTGAGTCTCAGATAAGGGATATCATTGATTGGTTGTTGGCCTTTCATGGTGATTCCACGGGTTTGAGTACTGATAGTTT GGCTGATGCTGGGTACCCTGGGGCTTCTTCACTTGGGGATGCGGTTTGTGGCATGGCTGTTGCTTATATAACGGAGAAGG ATTTTCTTTTCTGGTTCAGATCACACACGGCGAAGGAAATAAAATGGGGTGGTGCAAAGCATCACCCGGAGGATAAGGAT GATGGGCAGCGGATGCATCCCCGTTCTTCCTTCAAGGCATTTTTAGAAGTGGTGAAGAGCCGTAGTTCGCCGTGGGATAA TGCGGAGATGGATGCAATTCACTCTTTGCAGCTTATCCTGCGGGACTCATTCAAGGAGGATGAACATAGCGATTCTAAGG CTGTTGTGAACACCCATCTGGCTGAGCTAGAGTTGCAAGGGGTGGATGAACTGAGTTCCGTGGCTAGAGAGATGGTTAGG TTGATAGAAACTGCCACTGCTCCCATATTTGCCGTTGATGTTGAGGGCCACATAAATGGGTGGAATGTAAAAGTTTCAGA ATTGACAGGTCTCCCAGTTGAAGAGGCAATGGGGAAGTCCTTGGTTCGTGATCTTGTGTATAAGGAGTCTGAAGAAACTG TGGACAGGCTTCTTTCTCGTGCTTTAAAAGGTGAAGAAGATAAGAATGTTGAGATAAAATTGAGGACATTTGGCCCAGAA CATCAAGATAAGGCAGTTTATGTAGTGGTGAATGCTTGCTCCAGCAAGGATTATACAAATAATATAGTTGGGGTGTGCTT TGTTGGTCAGGATGTCACTGGTCAAAAAGTTGTAATGGACAAATTCATTAACATACAAGGTGACTATAAAGCTATTGTAC ACAGCCCAAATCCACTGATCCCTCCCATTTTTGCATCGGATGATAACACATGTTGCTTAGAGTGGAACAATGCCATGGAA AAGCTCACTGGTTGGGGTCGTGCAGATGTCATTGGAAAATTGTTAGTAGGAGAGGTTTTTGGCAGCTGCTGTCAGTTAAA GGGTTCAGATGCTATAACAAAGTTTATGATTGTCTTGCACAATGCGCTTGGTGGACAAGATACAGATAAATTCCCTTTTT CATTTCTCGACCGGCATGGAAAATATGTGCAAACTTTCTTGACTGCAAATAAGAGGGTTAGCATAGATGGTCAGATCATT GGGGCTTTTTGCTTTTTGCAAATTGTGAGTCCTGAACTTCAACAGGCTCTGAAGGTCCAGAAACAACAAGAGAAGAATTG CTTTGCTAGGATGAAAGAGTTAGCTTATATTTGTCAAGAAGTAAAAAATCCCTTGAGCGGGATACGCTTTACAAACTCTC TTTTGGAGGCTACAGGCTTGACGGATGAGCAAAAACAGTTTCTTGAGACTAGTGCTGCTTGTGAGAAGCAAATGTTAAAG ATAATACGGGACGTTGATCTGGAAAGCATCGAGGATGGGTCCCTGGAGCTTGAAAGGGGAGAATTCTTGCTTGGGAATGT CATAAATGCAGTAGTTAGTCAAGTAATGGTCTTGCTAAGAGAAAGAAATCTACAGTTGATTCGTGATATTCCTGAAGAAA TCAAAACATTGGCTGTTTATGGTGATCAGTTGAGGATTCAACAAGTATTGGCTGATTTCTTATCAAATGTTGTGCGGTAT GCACCATCTCCAGATGGCTGGGTAGAGACTCATGTATACCCAAAAATAAAGCAAATTTCAGACGGGCTCACCCTTCTCCA TGCTGAATTTCGGTTGGTATGCCCTGGTGAAGGTCTTCCTTCTGAATTGGTTCAAGACATGTTTCATAACAGTCGGTGGG TGACTCAAGAAGGCCTAGGGCTATGCATGAGCAGGAAGATTCTGAAGTTAATGAACGGCGAAGTCCAATACATCAGGGAG GCAGAACGGTGCTACTTCTTTGTTCTACTTGAACTACCGGTGACACGCAGAAGCTCTAAAGGTGTTAACTAG
Protein sequence (LotjaGi6g1v0258900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASASRRGGGGGGSGSGSVVERGKEEEKLKRGGGGGGGESVMMRKAIAQYTEDARLHAVYEQSGESFDYSHSLRVTVESV PEQQITAYLARIQRGGYIQPFGCMIAVDDPSFRLLAYSDNARDMLGITPQSVPSIDDDSSSSSFALGTDVRSLFSPSSAV LLDKAFAAREISLMNPLWIHSRTSGRPFYGILHRVDVGVVIDLEPARSDDPALSIAGAVQSQKLAVRAISQLQSLPGGDV KLLCDAVVQSVRELTGYDRVMVYKFHEDEHGEVVAESKRADLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVG VVQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDDAVGVGGRSSMRLWGLVVCHHTSARCIPFPL RYACEFLMQAFGLQLNMELQMAAQSLEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYCQGSYYPLGVTP SESQIRDIIDWLLAFHGDSTGLSTDSLADAGYPGASSLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKD DGQRMHPRSSFKAFLEVVKSRSSPWDNAEMDAIHSLQLILRDSFKEDEHSDSKAVVNTHLAELELQGVDELSSVAREMVR LIETATAPIFAVDVEGHINGWNVKVSELTGLPVEEAMGKSLVRDLVYKESEETVDRLLSRALKGEEDKNVEIKLRTFGPE HQDKAVYVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAME KLTGWGRADVIGKLLVGEVFGSCCQLKGSDAITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVSIDGQII GAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEATGLTDEQKQFLETSAACEKQMLK IIRDVDLESIEDGSLELERGEFLLGNVINAVVSQVMVLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRY APSPDGWVETHVYPKIKQISDGLTLLHAEFRLVCPGEGLPSELVQDMFHNSRWVTQEGLGLCMSRKILKLMNGEVQYIRE AERCYFFVLLELPVTRRSSKGVN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 40 | 40 | - | – | |
| PIRSF | 34 | 1141 | 1108 | 0.0 | ||
| PANTHER | 48 | 1140 | 1093 | 0.0 | – | |
| PANTHER | 48 | 1140 | 1093 | 0.0 | – | |
| Pfam | 87 | 206 | 120 | 1.8E-42 | ||
| SUPERFAMILY | 92 | 210 | 119 | 8.24E-26 | ||
| Gene3D | 92 | 342 | 251 | 4.2E-171 | – | |
| PRINTS | 154 | 176 | 23 | 1.5E-108 | ||
| Gene3D | 212 | 580 | 369 | 4.2E-171 | ||
| SUPERFAMILY | 219 | 416 | 198 | 9.25E-53 | – | |
| SMART | 239 | 429 | 191 | 2.1E-19 | ||
| ProSiteProfiles | 239 | 409 | 171 | 66.894 | ||
| Pfam | 240 | 419 | 180 | 6.3E-34 | ||
| PRINTS | 254 | 273 | 20 | 1.5E-108 | ||
| ProSitePatterns | 339 | 348 | 10 | - | ||
| PRINTS | 339 | 360 | 22 | 1.5E-108 | ||
| Gene3D | 424 | 597 | 174 | 4.2E-171 | ||
| SUPERFAMILY | 427 | 604 | 178 | 5.79E-57 | – | |
| Pfam | 432 | 607 | 176 | 5.4E-56 | ||
| PRINTS | 449 | 469 | 21 | 1.5E-108 | ||
| PRINTS | 534 | 553 | 20 | 1.5E-108 | ||
| PRINTS | 567 | 585 | 19 | 1.5E-108 | ||
| Gene3D | 632 | 756 | 125 | 1.1E-15 | – | |
| ProSiteProfiles | 634 | 705 | 72 | 23.012 | ||
| SMART | 636 | 703 | 68 | 3.5E-7 | ||
| Pfam | 637 | 752 | 116 | 2.8E-22 | ||
| PRINTS | 637 | 653 | 17 | 1.5E-108 | ||
| SUPERFAMILY | 639 | 748 | 110 | 6.28E-13 | ||
| TIGRFAM | 641 | 756 | 116 | 1.9E-10 | ||
| CDD | 645 | 752 | 108 | 2.3486E-7 | ||
| PRINTS | 656 | 671 | 16 | 1.5E-108 | ||
| PRINTS | 730 | 747 | 18 | 1.5E-108 | ||
| PRINTS | 750 | 770 | 21 | 1.5E-108 | ||
| SMART | 767 | 837 | 71 | 0.56 | ||
| Pfam | 768 | 887 | 120 | 1.3E-21 | ||
| ProSiteProfiles | 768 | 820 | 53 | 12.711 | ||
| CDD | 779 | 887 | 109 | 4.10694E-6 | ||
| Gene3D | 781 | 890 | 110 | 2.2E-8 | – | |
| SUPERFAMILY | 782 | 886 | 105 | 1.68E-9 | ||
| Gene3D | 891 | 971 | 81 | 2.7E-6 | – | |
| SUPERFAMILY | 901 | 965 | 65 | 5.89E-5 | ||
| CDD | 909 | 965 | 57 | 4.61471E-9 | ||
| SMART | 909 | 973 | 65 | 3.6E-12 | ||
| Pfam | 912 | 973 | 62 | 1.6E-10 | ||
| ProSiteProfiles | 916 | 1136 | 221 | 38.523 | ||
| Gene3D | 972 | 1138 | 167 | 6.6E-15 | ||
| SUPERFAMILY | 984 | 1132 | 149 | 1.34E-14 | ||
| CDD | 1020 | 1132 | 113 | 4.61793E-62 | – | |
| Pfam | 1021 | 1125 | 105 | 3.3E-8 | ||
| SMART | 1021 | 1136 | 116 | 7.5E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphorelay sensor kinase activity | Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Biological process | Detection of visible light | The series of events in which a visible light stimulus is received by a cell and converted into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm. | ||
| Biological process | Red, far-red light phototransduction | The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm. | ||
| Molecular function | Photoreceptor activity | The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation. | ||
| Biological process | Protein-tetrapyrrole linkage | The covalent linking of a tetrapyrrole to a protein. | ||
| Biological process | Protein-chromophore linkage | The covalent or noncovalent attachment of a chromophore to a protein. | ||
| Molecular function | Protein homodimerization activity | Interacting selectively and non-covalently with an identical protein to form a homodimer. |
Expression pattern of LotjaGi6g1v0258900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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