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GO:0030532
Overview
| Field | Value |
|---|---|
| Namespace | Cellular component |
| Short description | Small nuclear ribonucleoprotein complex |
| Full defintion | A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs. |
| Subterm of |
Relationships
The relationship of GO:0030532 with other GO terms.
| Relationship type | GO terms |
|---|---|
| Is a | |
| Regulates | n.a. |
| Part of | n.a. |
| Positively regulates | n.a. |
| Negatively regulates | n.a. |
Ancestor tree
A force layout showing the ancestor tree for GO:0030532, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.
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Additional data
This table contains additional metadata associated with the GO entry's definition field.
| Field | Value |
|---|---|
| GOC | mah |
| ISBN |
Associated Lotus transcripts 6
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| Transcript | Name | Description | GO terms | GO count |
|---|---|---|---|---|
| – | Small nuclear ribonucleoprotein-like protein [Medicago truncatula] gi|357521399|ref|XP_003630988.1| | 2 | ||
| – | PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like [Cucumis sativus] gi|449457536|ref|XP_004146504.1| | 2 | ||
| – | Small nuclear ribonucleoprotein; TAIR: AT2G47640.2 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9VI10|SMD2_DROME Probable small nuclear ribonucleoprotein Sm D2; TrEMBL-Plants: tr|G7LBH6|G7LBH6_MEDTR Small nuclear ribonucleoprotein; Found in the gene: LotjaGi4g1v0349000 | 2 | ||
| – | Small nuclear ribonucleoprotein; TAIR: AT2G47640.2 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9VI10|SMD2_DROME Probable small nuclear ribonucleoprotein Sm D2; TrEMBL-Plants: tr|G7LBH6|G7LBH6_MEDTR Small nuclear ribonucleoprotein; Found in the gene: LotjaGi4g1v0349000 | 2 | ||
| – | Small nuclear ribonucleoprotein family protein; TAIR: AT2G47640.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q18786|SMD2_CAEEL Probable small nuclear ribonucleoprotein Sm D2; TrEMBL-Plants: tr|A0A0A0KUK4|A0A0A0KUK4_CUCSA Uncharacterized protein; Found in the gene: LotjaGi4g1v0458800 | 2 | ||
| – | Small nuclear ribonucleoprotein family protein; TAIR: AT2G47640.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9VI10|SMD2_DROME Probable small nuclear ribonucleoprotein Sm D2; TrEMBL-Plants: tr|A0A0A0KUK4|A0A0A0KUK4_CUCSA Uncharacterized protein; Found in the gene: LotjaGi4g1v0458800 | 2 |
Co-occuring GO terms 1
A list of co-occurring GO terms within the L. japonicus gene space:
| GO term | Namespace | Name | Observations | Saturation (%) |
|---|---|---|---|---|
| Cellular component | Small nuclear ribonucleoprotein complex | 1 | 16.67 |