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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0020179 |
| Transcript ID | Lj0g3v0020179.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| PANTHER | 2 | 232 | 231 | 0 | – | |
| PANTHER | 2 | 232 | 231 | 0 | – | |
| Phobius | 5 | 16 | 12 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 17 | 28 | 12 | – | – | |
| Phobius | 29 | 989 | 961 | – | – | |
| Gene3D | 30 | 325 | 296 | 5.90E-70 | ||
| Pfam | 33 | 73 | 41 | 8.50E-11 | ||
| SUPERFAMILY | 81 | 445 | 365 | 4.16E-60 | – | |
| SMART | 101 | 125 | 25 | 17 | ||
| Pfam | 151 | 209 | 59 | 6.60E-08 | ||
| SMART | 173 | 196 | 24 | 4.5 | ||
| PANTHER | 252 | 295 | 44 | 0 | – | |
| PANTHER | 252 | 295 | 44 | 0 | – | |
| SMART | 293 | 315 | 23 | 83 | ||
| Pfam | 318 | 378 | 61 | 1.00E-06 | ||
| Gene3D | 326 | 568 | 243 | 5.20E-40 | ||
| SMART | 365 | 387 | 23 | 25 | ||
| SUPERFAMILY | 390 | 556 | 167 | 6.97E-24 | ||
| PANTHER | 393 | 789 | 397 | 0 | – | |
| PANTHER | 393 | 789 | 397 | 0 | – | |
| SMART | 514 | 536 | 23 | 160 | ||
| Gene3D | 569 | 752 | 184 | 5.60E-39 | ||
| SUPERFAMILY | 578 | 760 | 183 | 1.63E-57 | ||
| SMART | 633 | 657 | 25 | 360 | ||
| Pfam | 635 | 694 | 60 | 1.20E-06 | ||
| PANTHER | 813 | 1041 | 229 | 0 | – | |
| PANTHER | 813 | 1041 | 229 | 0 | – | |
| Gene3D | 848 | 961 | 114 | 7.50E-28 | ||
| SUPERFAMILY | 853 | 962 | 110 | 1.63E-57 | ||
| SMART | 895 | 919 | 25 | 80 | ||
| Phobius | 990 | 1013 | 24 | – | – | |
| TMHMM | 991 | 1013 | 23 | – | – | |
| Phobius | 1014 | 1054 | 41 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0020179.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0020179.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.