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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0055049 |
| Transcript ID | Lj0g3v0055049.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: germin-like protein 5-1-like [Glycine max] gi|356572882|ref|XP_003554594.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 22 | 22 | – | – | |
| SignalP | 1 | 18 | 18 | – | – | |
| Phobius | 1 | 22 | 22 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 3 | 219 | 217 | 1.30E-160 | – | |
| PANTHER | 3 | 219 | 217 | 1.30E-160 | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| Phobius | 18 | 22 | 5 | – | – | |
| Phobius | 23 | 219 | 197 | – | – | |
| Gene3D | 23 | 214 | 192 | 5.70E-67 | ||
| SUPERFAMILY | 24 | 214 | 191 | 9.73E-46 | ||
| SMART | 60 | 209 | 150 | 1.90E-36 | ||
| Pfam | 63 | 209 | 147 | 2.20E-49 | ||
| ProSitePatterns | 104 | 117 | 14 | – | ||
| PRINTS | 109 | 129 | 21 | 3.90E-27 | ||
| PRINTS | 139 | 159 | 21 | 3.90E-27 | ||
| PRINTS | 172 | 187 | 16 | 3.90E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Manganese ion binding | Interacting selectively and non-covalently with manganese (Mn) ions. | ||
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of Lj0g3v0055049.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0055049.1, powered by CORGI.
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