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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0072849 |
| Transcript ID | Lj0g3v0072849.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: F-box protein At3g54460-like [Glycine max] gi|356541572|ref|XP_003539248.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 233 | 275 | 43 | 3.40E-09 | ||
| ProSiteProfiles | 236 | 288 | 53 | 10.822 | ||
| Gene3D | 236 | 274 | 39 | 2.80E-08 | – | |
| Pfam | 239 | 281 | 43 | 1.20E-07 | ||
| SMART | 242 | 282 | 41 | 5.00E-08 | ||
| SUPERFAMILY | 273 | 301 | 29 | 7.97E-08 | ||
| PANTHER | 274 | 367 | 94 | 2.40E-154 | – | |
| PANTHER | 274 | 367 | 94 | 2.40E-154 | – | |
| SMART | 280 | 858 | 579 | 1.30E-13 | ||
| Gene3D | 281 | 301 | 21 | 1.60E-17 | ||
| Pfam | 287 | 930 | 644 | 1.80E-96 | ||
| Gene3D | 339 | 366 | 28 | 1.60E-17 | ||
| SUPERFAMILY | 340 | 366 | 27 | 7.97E-08 | ||
| MobiDBLite | 436 | 458 | 23 | – | – | |
| ProSiteProfiles | 533 | 584 | 52 | 13.35 | ||
| Pfam | 538 | 581 | 44 | 3.70E-14 | ||
| ProSiteProfiles | 692 | 847 | 156 | 10.427 | ||
| PANTHER | 705 | 946 | 242 | 2.40E-154 | – | |
| PANTHER | 705 | 946 | 242 | 2.40E-154 | – | |
| Gene3D | 713 | 835 | 123 | 1.60E-17 | ||
| SUPERFAMILY | 715 | 887 | 173 | 1.01E-21 | ||
| CDD | 718 | 829 | 112 | 5.40E-07 | – | |
| SUPERFAMILY | 789 | 831 | 43 | 1.90E-33 | ||
| PANTHER | 1010 | 1049 | 40 | 2.40E-154 | – | |
| PANTHER | 1010 | 1049 | 40 | 2.40E-154 | – | |
| ProSitePatterns | 1025 | 1034 | 10 | – | ||
| PANTHER | 1085 | 1109 | 25 | 2.40E-154 | – | |
| PANTHER | 1085 | 1109 | 25 | 2.40E-154 | – | |
| SUPERFAMILY | 1087 | 1111 | 25 | 1.90E-33 | ||
| Gene3D | 1093 | 1112 | 20 | 7.50E-10 | ||
| CDD | 1125 | 1253 | 129 | 1.13E-11 | – | |
| ProSiteProfiles | 1141 | 1299 | 159 | 10.917 | ||
| Pfam | 1152 | 1253 | 102 | 1.10E-09 | ||
| PANTHER | 1155 | 1275 | 121 | 2.40E-154 | – | |
| PANTHER | 1155 | 1275 | 121 | 2.40E-154 | – | |
| SUPERFAMILY | 1157 | 1308 | 152 | 1.90E-33 | ||
| Gene3D | 1158 | 1290 | 133 | 7.50E-10 | ||
| SMART | 1171 | 1253 | 83 | 7.40E-07 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of Lj0g3v0072849.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0072849.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.