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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0106299 |
| Transcript ID | Lj0g3v0106299.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable lysine-specific demethylase ELF6-like [Glycine max] gi|356533957|ref|XP_003535524.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 64 | 60 | 0 | – | |
| PANTHER | 5 | 64 | 60 | 0 | – | |
| SMART | 15 | 55 | 41 | 2.30E-15 | ||
| ProSiteProfiles | 16 | 57 | 42 | 14.34 | ||
| Pfam | 17 | 50 | 34 | 2.00E-15 | ||
| PANTHER | 104 | 199 | 96 | 0 | – | |
| PANTHER | 104 | 199 | 96 | 0 | – | |
| MobiDBLite | 112 | 134 | 23 | – | – | |
| MobiDBLite | 266 | 288 | 23 | – | – | |
| PANTHER | 291 | 1054 | 764 | 0 | – | |
| PANTHER | 291 | 1054 | 764 | 0 | – | |
| ProSiteProfiles | 294 | 463 | 170 | 34.537 | ||
| SMART | 294 | 463 | 170 | 2.40E-44 | ||
| SUPERFAMILY | 295 | 459 | 165 | 6.59E-26 | – | |
| Pfam | 328 | 446 | 119 | 1.40E-34 | ||
| MobiDBLite | 832 | 866 | 35 | – | – | |
| MobiDBLite | 1074 | 1154 | 81 | – | – | |
| PANTHER | 1110 | 1438 | 329 | 0 | – | |
| PANTHER | 1110 | 1438 | 329 | 0 | – | |
| MobiDBLite | 1354 | 1380 | 27 | – | – | |
| Gene3D | 1383 | 1406 | 24 | 1.00E-04 | ||
| SMART | 1386 | 1408 | 23 | 10 | ||
| SMART | 1409 | 1433 | 25 | 0.55 | ||
| ProSiteProfiles | 1409 | 1438 | 30 | 11.572 | ||
| SUPERFAMILY | 1410 | 1446 | 37 | 2.19E-05 | – | |
| ProSitePatterns | 1411 | 1433 | 23 | – | ||
| Gene3D | 1411 | 1437 | 27 | 3.70E-05 | ||
| Gene3D | 1438 | 1463 | 26 | 2.50E-09 | ||
| SMART | 1439 | 1463 | 25 | 0.0042 | ||
| ProSiteProfiles | 1439 | 1468 | 30 | 11.718 | ||
| ProSitePatterns | 1441 | 1463 | 23 | – | ||
| SUPERFAMILY | 1449 | 1492 | 44 | 1.52E-10 | – | |
| Gene3D | 1464 | 1492 | 29 | 2.60E-11 | ||
| PANTHER | 1464 | 1485 | 22 | 0 | – | |
| PANTHER | 1464 | 1485 | 22 | 0 | – | |
| SMART | 1469 | 1495 | 27 | 0.045 | ||
| ProSiteProfiles | 1469 | 1500 | 32 | 10.928 | ||
| ProSitePatterns | 1471 | 1495 | 25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of Lj0g3v0106299.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0106299.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.