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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0116239 |
| Transcript ID | Lj0g3v0116239.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Uncharacterized protein isoform 2 [Theobroma cacao] gi|508701719|gb|EOX93615.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 48 | 48 | – | – | |
| SUPERFAMILY | 66 | 120 | 55 | 4.21E-08 | ||
| PANTHER | 67 | 453 | 387 | 1.20E-32 | – | |
| Gene3D | 67 | 118 | 52 | 4.50E-07 | ||
| PANTHER | 67 | 453 | 387 | 1.20E-32 | – | |
| SMART | 69 | 115 | 47 | 2.70E-04 | ||
| Coils | 116 | 136 | 21 | – | – | |
| MobiDBLite | 150 | 184 | 35 | – | – | |
| MobiDBLite | 201 | 226 | 26 | – | – | |
| MobiDBLite | 239 | 262 | 24 | – | – | |
| MobiDBLite | 276 | 334 | 59 | – | – | |
| MobiDBLite | 356 | 380 | 25 | – | – | |
| ProSiteProfiles | 387 | 447 | 61 | 7.178 | ||
| Gene3D | 388 | 450 | 63 | 1.30E-06 | ||
| SUPERFAMILY | 389 | 447 | 59 | 6.49E-07 | ||
| CDD | 395 | 447 | 53 | 1.97E-09 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of Lj0g3v0116239.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0116239.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.