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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0188449 |
| Transcript ID | Lj0g3v0188449.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: U-box domain-containing protein 4-like [Cicer arietinum] gi|502129552|ref|XP_004500342.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 29 | 320 | 292 | 2.00E-292 | – | |
| PANTHER | 29 | 320 | 292 | 2.00E-292 | – | |
| Coils | 179 | 209 | 31 | – | – | |
| SUPERFAMILY | 225 | 313 | 89 | 9.08E-28 | – | |
| ProSiteProfiles | 235 | 309 | 75 | 40.241 | ||
| Gene3D | 235 | 307 | 73 | 4.40E-29 | ||
| Pfam | 236 | 306 | 71 | 1.00E-20 | ||
| SMART | 239 | 302 | 64 | 8.60E-31 | ||
| MobiDBLite | 312 | 392 | 81 | – | – | |
| MobiDBLite | 405 | 519 | 115 | – | – | |
| PANTHER | 467 | 835 | 369 | 2.00E-292 | – | |
| PANTHER | 467 | 835 | 369 | 2.00E-292 | – | |
| Gene3D | 520 | 826 | 307 | 2.70E-78 | ||
| SMART | 536 | 580 | 45 | 280 | ||
| CDD | 553 | 662 | 110 | 2.18E-19 | – | |
| SUPERFAMILY | 553 | 825 | 273 | 1.39E-48 | ||
| SMART | 582 | 622 | 41 | 7.20E-08 | ||
| Pfam | 584 | 621 | 38 | 1.30E-10 | ||
| ProSiteProfiles | 593 | 635 | 43 | 14.857 | ||
| Pfam | 623 | 662 | 40 | 5.00E-06 | ||
| SMART | 623 | 663 | 41 | 0.0025 | ||
| SMART | 664 | 704 | 41 | 0.25 | ||
| Pfam | 666 | 703 | 38 | 8.30E-06 | ||
| CDD | 671 | 827 | 157 | 3.63E-07 | – | |
| ProSiteProfiles | 675 | 717 | 43 | 10.272 | ||
| SMART | 705 | 744 | 40 | 0.0046 | ||
| ProSiteProfiles | 716 | 757 | 42 | 10.657 | ||
| SMART | 745 | 785 | 41 | 6.7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of Lj0g3v0188449.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0188449.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.