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Lj0g3v0191649.1

Overview

Field Value
Gene ID Lj0g3v0191649
Transcript ID Lj0g3v0191649.1
Related isoforms 4
Lotus japonicus genome version MG20 v3.0
Description Os03g0747600 [Oryza sativa Japonica Group] gi|297601684|ref|NP_001051260.2|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 93 93 – –
MobiDBLite
mobidb-lite
119 140 22 – –
MobiDBLite
mobidb-lite
153 228 76 – –
Pfam
PF16135
236 307 72 7.20E-16
IPR032308
PANTHER
PTHR24098
238 645 408 8.90E-122 –
PANTHER
PTHR24098:SF9
238 645 408 8.90E-122 –
SUPERFAMILY
SSF57903
344 393 50 1.42E-10
IPR011011
Gene3D
G3DSA:3.30.40.10
346 393 48 6.80E-12
IPR013083
ProSiteProfiles
PS50016
350 394 45 9.009
IPR019787
SMART
SM00249
352 392 41 1.20E-07
IPR001965
ProSitePatterns
PS01359
353 391 39 –
IPR019786
SUPERFAMILY
SSF57903
392 425 34 6.42E-06
IPR011011
SMART
SM00249
393 437 45 4.9
IPR001965
Gene3D
G3DSA:3.30.40.10
394 425 32 1.00E-05
IPR013083
Gene3D
G3DSA:3.40.630.30
516 602 87 1.60E-07
IPR016181
SUPERFAMILY
SSF55729
526 618 93 2.23E-10
IPR016181
Pfam
PF00583
535 605 71 1.50E-04
IPR000182
CDD
cd04301
537 597 61 7.83E-06 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008080
Molecular function N-acetyltransferase activity Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj0g3v0191649.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0191649.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.