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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0219689 |
| Transcript ID | Lj0g3v0219689.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Glucan 1,3-beta-glucosidase [Medicago truncatula] gi|357463267|ref|XP_003601915.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 8 | 8 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 9 | 20 | 12 | – | – | |
| TMHMM | 12 | 31 | 20 | – | – | |
| PANTHER | 18 | 507 | 490 | 5.60E-229 | – | |
| PANTHER | 18 | 507 | 490 | 5.60E-229 | ||
| Phobius | 21 | 25 | 5 | – | – | |
| Phobius | 26 | 513 | 488 | – | – | |
| Gene3D | 33 | 69 | 37 | 3.40E-125 | ||
| SUPERFAMILY | 34 | 70 | 37 | 3.96E-84 | ||
| SUPERFAMILY | 69 | 181 | 113 | 2.73E-24 | ||
| Gene3D | 70 | 179 | 110 | 1.20E-20 | – | |
| Pfam | 86 | 180 | 95 | 1.60E-05 | ||
| Gene3D | 202 | 504 | 303 | 3.40E-125 | ||
| SUPERFAMILY | 202 | 504 | 303 | 3.96E-84 | ||
| Pfam | 226 | 488 | 263 | 1.30E-26 | ||
| ProSitePatterns | 336 | 345 | 10 | – | ||
| Phobius | 514 | 532 | 19 | – | – | |
| Phobius | 533 | 533 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Biological process | Actin filament organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. | ||
| Molecular function | Protein binding, bridging | The binding activity of a molecule that brings together two or more protein molecules, or a protein and another macromolecule or complex, through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way. | ||
| Molecular function | Actin filament binding | Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits. |
Expression pattern of Lj0g3v0219689.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0219689.2, powered by CORGI.
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