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Lj0g3v0241709.1

Overview

Field Value
Gene ID Lj0g3v0241709
Transcript ID Lj0g3v0241709.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: receptor-like serine/threonine-protein kinase At4g25390-like [Cicer arietinum] gi|502119504|ref|XP_004496642.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 19 19 – –
ProSiteProfiles
PS51257
1 26 26 5 –
TMHMM
TMhelix
15 34 20 – –
Phobius
TRANSMEMBRANE
20 36 17 – –
Gene3D
G3DSA:2.60.120.200
22 77 56 2.40E-06
IPR013320
PANTHER
PTHR27003:SF86
26 221 196 9.30E-108 –
PANTHER
PTHR27003
26 221 196 9.30E-108 –
Phobius
CYTOPLASMIC_DOMAIN
37 311 275 – –
SUPERFAMILY
SSF56112
43 223 181 3.78E-42
IPR011009
ProSiteProfiles
PS50011
67 311 245 22.619
IPR000719
SMART
SM00220
67 284 218 1.20E-07
IPR000719
Pfam
PF07714
70 223 154 2.40E-24
IPR001245
Gene3D
G3DSA:3.30.200.20
78 132 55 1.80E-12 –
Gene3D
G3DSA:1.10.510.10
133 222 90 3.30E-20 –
ProSitePatterns
PS00108
190 202 13 –
IPR008271
MobiDBLite
mobidb-lite
227 248 22 – –
MobiDBLite
mobidb-lite
253 272 20 – –
MobiDBLite
mobidb-lite
292 311 20 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0241709.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0241709.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.