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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0282319 |
| Transcript ID | Lj0g3v0282319.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like [Cicer arietinum] gi|502138638|ref|XP_004503478.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 285 | 285 | 1.40E-197 | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 9 | 9 | – | – | |
| PANTHER | 1 | 285 | 285 | 1.40E-197 | – | |
| SUPERFAMILY | 2 | 242 | 241 | 1.65E-11 | – | |
| Phobius | 10 | 18 | 9 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| Pfam | 22 | 51 | 30 | 1.50E-07 | ||
| Phobius | 24 | 342 | 319 | – | – | |
| ProSiteProfiles | 26 | 56 | 31 | 8.923 | ||
| Gene3D | 26 | 275 | 250 | 4.70E-16 | ||
| TIGRFAM | 28 | 53 | 26 | 3.00E-04 | ||
| ProSiteProfiles | 62 | 96 | 35 | 9.799 | ||
| Pfam | 64 | 93 | 30 | 3.60E-04 | ||
| TIGRFAM | 64 | 97 | 34 | 9.80E-05 | ||
| ProSiteProfiles | 97 | 127 | 31 | 10.271 | ||
| Pfam | 100 | 127 | 28 | 5.60E-06 | ||
| TIGRFAM | 100 | 132 | 33 | 6.60E-06 | ||
| ProSiteProfiles | 132 | 166 | 35 | 5.667 | ||
| Pfam | 161 | 217 | 57 | 0.0061 | ||
| ProSiteProfiles | 167 | 201 | 35 | 10.139 | ||
| TIGRFAM | 169 | 202 | 34 | 5.50E-05 | ||
| ProSiteProfiles | 207 | 241 | 35 | 7.761 | ||
| Pfam | 246 | 284 | 39 | 1.90E-08 | ||
| ProSiteProfiles | 246 | 280 | 35 | 10.918 | ||
| TIGRFAM | 250 | 282 | 33 | 4.30E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0282319.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0282319.1, powered by CORGI.
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