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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0318599 |
| Transcript ID | Lj0g3v0318599.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Glycine max] gi|356497888|ref|XP_003517788.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 345 | 345 | 1.00E-200 | – | |
| PANTHER | 1 | 345 | 345 | 1.00E-200 | – | |
| TIGRFAM | 2 | 345 | 344 | 3.00E-131 | ||
| CDD | 8 | 304 | 297 | 2.05E-170 | ||
| SUPERFAMILY | 8 | 291 | 284 | 1.51E-81 | – | |
| Gene3D | 8 | 295 | 288 | 5.10E-117 | – | |
| ProSiteProfiles | 33 | 299 | 267 | 18.254 | ||
| Pfam | 87 | 294 | 208 | 2.20E-32 | ||
| PRINTS | 94 | 122 | 29 | 3.10E-52 | ||
| PRINTS | 127 | 150 | 24 | 3.10E-52 | ||
| PRINTS | 228 | 256 | 29 | 3.10E-52 | ||
| PRINTS | 272 | 285 | 14 | 3.10E-52 | ||
| SUPERFAMILY | 292 | 345 | 54 | 1.03E-11 | ||
| Gene3D | 296 | 345 | 50 | 9.20E-14 | ||
| PRINTS | 299 | 311 | 13 | 3.10E-52 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Aminoacyl-tRNA ligase activity | Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP. | ||
| Molecular function | Threonine-tRNA ligase activity | Catalysis of the reaction: ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + L-threonyl-tRNA(Thr). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | TRNA aminoacylation for protein translation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis. | ||
| Biological process | Threonyl-tRNA aminoacylation | The process of coupling threonine to threonyl-tRNA, catalyzed by threonyl-tRNA synthetase. The threonyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a threonine-accetping tRNA. |
Expression pattern of Lj0g3v0318599.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0318599.1, powered by CORGI.
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