Domain Predictions — View

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IPR033728

Source: InterPro

Description

IPR033728 is a Threonine-tRNA ligase catalytic core domain.

<p>Threonyl-tRNA synthetase (ThrRS) is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. ThrRS is a homodimer. This core domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. ThrRS has been assigned to class II based upon its structure and the presence of three characteristic sequence motifs in the core domain [[cite:PUB00003923], [cite:PUB00007363], [cite:PUB00080183], [cite:PUB00079875]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 12

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0001799.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: threonine--tRNA ligase-like isoform X2 [Cicer arietinum] gi\|502134625\|ref\|XP_004502185.1\|	Domains G3DSA:3.30.54.20 G3DSA:3.30.930.10 G3DSA:3.30.980.10 IPR002314 IPR002320 IPR006195 IPR012947 IPR018163 IPR033728 PF00587 PF07973 PR01047 PS50862 PTHR11451 PTHR11451:SF32 SM00863 SSF55186 SSF55681 TIGR00418 cd00771	20
Lj0g3v0274769.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: threonine--tRNA ligase-like isoform X2 [Cicer arietinum] gi\|502134625\|ref\|XP_004502185.1\|	Domains Coil G3DSA:3.30.54.20 G3DSA:3.30.930.10 G3DSA:3.30.980.10 IPR002314 IPR002320 IPR006195 IPR012947 IPR018163 IPR033728 PF00587 PF07973 PR01047 PS50862 PTHR11451 PTHR11451:SF32 SM00863 SSF55186 SSF55681 TIGR00418 cd00771	21
Lj0g3v0318599.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Glycine max] gi\|356497888\|ref\|XP_003517788.1\|	Domains G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR002314 IPR002320 IPR004154 IPR006195 IPR033728 PF00587 PR01047 PS50862 PTHR11451 PTHR11451:SF5 SSF52954 SSF55681 TIGR00418 cd00771	16
Lj2g3v1378840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: threonine--tRNA ligase, mitochondrial-like [Cicer arietinum] gi\|502093025\|ref\|XP_004489863.1\|	Domains G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR002314 IPR002320 IPR004154 IPR006195 IPR033728 PF00587 PF03129 PR01047 PS50862 PTHR11451 PTHR11451:SF5 SSF52954 SSF55681 TIGR00418 cd00771 cd00860	18
LotjaGi1g1v0067400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine--tRNA ligase; TAIR: AT5G26830.1 Threonyl-tRNA synthetase; Swiss-Prot: sp\|O04630\|SYTM1_ARATH Threonine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr\|A0A151TGM6\|A0A151TGM6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0067400_LC	Domains Coil G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR002314 IPR002320 IPR004154 IPR006195 IPR033728 IPR036621 PF00587 PF03129 PR01047 PS50862 PTHR11451 PTHR11451:SF46 SSF52954 SSF55681 TIGR00418 cd00771 cd00860	20
LotjaGi2g1v0318100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine--tRNA ligase; TAIR: AT5G26830.1 Threonyl-tRNA synthetase; Swiss-Prot: sp\|O04630\|SYTM1_ARATH Threonine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr\|A0A0S3T3W6\|A0A0S3T3W6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0318100	Domains G3DSA:3.10.20.30 G3DSA:3.30.930.10 G3DSA:3.30.980.10 G3DSA:3.40.50.800 IPR002314 IPR002320 IPR004095 IPR004154 IPR006195 IPR012675 IPR012676 IPR012947 IPR018163 IPR033728 IPR036621 MF_00184 PF00587 PF02824 PF03129 PF07973 PR01047 PS50862 PS51880 PTHR11451 PTHR11451:SF46 SM00863 SSF52954 SSF55186 SSF55681 SSF81271 SignalP-TM TIGR00418 cd00771 cd00860 cd01667	35
LotjaGi2g1v0318100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine--tRNA ligase; TAIR: AT5G26830.1 Threonyl-tRNA synthetase; Swiss-Prot: sp\|O04630\|SYTM1_ARATH Threonine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr\|A0A0S3T3W6\|A0A0S3T3W6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0318100	Domains G3DSA:3.10.20.30 G3DSA:3.30.930.10 G3DSA:3.30.980.10 G3DSA:3.40.50.800 IPR002314 IPR002320 IPR004095 IPR004154 IPR006195 IPR012675 IPR012676 IPR012947 IPR018163 IPR033728 IPR036621 MF_00184 PF00587 PF02824 PF03129 PF07973 PR01047 PS50862 PS51880 PTHR11451 PTHR11451:SF46 SM00863 SSF52954 SSF55186 SSF55681 SSF81271 SignalP-TM TIGR00418 cd00771 cd00860 cd01667	35
LotjaGi2g1v0318100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine--tRNA ligase; TAIR: AT5G26830.1 Threonyl-tRNA synthetase; Swiss-Prot: sp\|O04630\|SYTM1_ARATH Threonine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr\|A0A0S3T3W6\|A0A0S3T3W6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0318100	Domains G3DSA:3.10.20.30 G3DSA:3.30.930.10 G3DSA:3.30.980.10 G3DSA:3.40.50.800 IPR002314 IPR002320 IPR004095 IPR004154 IPR006195 IPR012675 IPR012676 IPR012947 IPR018163 IPR033728 IPR036621 MF_00184 PF00587 PF02824 PF03129 PF07973 PR01047 PS50862 PS51880 PTHR11451 PTHR11451:SF46 SM00863 SSF52954 SSF55186 SSF55681 SSF81271 SignalP-TM TIGR00418 cd00771 cd00860 cd01667	35
LotjaGi6g1v0022700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine--tRNA ligase; TAIR: AT2G04842.1 threonyl-tRNA synthetase, putative / threonine-tRNA ligase; Swiss-Prot: sp\|F4IFC5\|SYTM2_ARATH Threonine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr\|G7J9I7\|G7J9I7_MEDTR Threonyl-tRNA synthetase/threonine-tRNA ligase, putative; Found in the gene: LotjaGi6g1v0022700	Domains G3DSA:3.30.54.20 G3DSA:3.30.930.10 G3DSA:3.30.980.10 G3DSA:3.40.50.800 IPR002314 IPR002320 IPR004154 IPR006195 IPR012947 IPR018163 IPR033728 IPR036621 MF_00184 PF00587 PF03129 PF07973 PR01047 PS50862 PTHR11451 PTHR11451:SF44 SM00863 SSF52954 SSF55186 SSF55681 TIGR00418 cd00771 cd00860	27
LotjaGi6g1v0022700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine--tRNA ligase; TAIR: AT2G04842.1 threonyl-tRNA synthetase, putative / threonine-tRNA ligase; Swiss-Prot: sp\|F4IFC5\|SYTM2_ARATH Threonine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr\|I1NAJ0\|I1NAJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0022700	Domains G3DSA:3.30.54.20 G3DSA:3.30.930.10 G3DSA:3.30.980.10 G3DSA:3.40.50.800 IPR002314 IPR002320 IPR004154 IPR006195 IPR012947 IPR018163 IPR033728 IPR036621 MF_00184 PF00587 PF03129 PF07973 PR01047 PS50862 PTHR11451 PTHR11451:SF44 SM00863 SSF52954 SSF55186 SSF55681 TIGR00418 cd00771 cd00860	27
LotjaGi6g1v0022700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine--tRNA ligase; TAIR: AT2G04842.1 threonyl-tRNA synthetase, putative / threonine-tRNA ligase; Swiss-Prot: sp\|F4IFC5\|SYTM2_ARATH Threonine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr\|I1NAJ0\|I1NAJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0022700	Domains G3DSA:3.30.54.20 G3DSA:3.30.930.10 G3DSA:3.30.980.10 G3DSA:3.40.50.800 IPR002314 IPR002320 IPR004154 IPR006195 IPR012947 IPR018163 IPR033728 IPR036621 MF_00184 PF00587 PF03129 PF07973 PR01047 PS50862 PTHR11451 PTHR11451:SF44 SM00863 SSF52954 SSF55186 SSF55681 TIGR00418 cd00771 cd00860	27
LotjaGi6g1v0022700.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine--tRNA ligase; TAIR: AT2G04842.1 threonyl-tRNA synthetase, putative / threonine-tRNA ligase; Swiss-Prot: sp\|F4IFC5\|SYTM2_ARATH Threonine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr\|I1NAJ0\|I1NAJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0022700	Domains G3DSA:3.30.54.20 G3DSA:3.30.930.10 G3DSA:3.30.980.10 G3DSA:3.40.50.800 IPR002314 IPR002320 IPR004154 IPR006195 IPR012947 IPR018163 IPR033728 IPR036621 MF_00184 PF00587 PF03129 PF07973 PR01047 PS50862 PTHR11451 PTHR11451:SF44 SM00863 SSF52954 SSF55186 SSF55681 TIGR00418 cd00771 cd00860	27

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00860	CDD	1	8.33