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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0343689 |
| Transcript ID | Lj0g3v0343689.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cicer arietinum] gi|502109543|ref|XP_004493669.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 8 | 49 | 42 | 0.0012 | ||
| CDD | 15 | 133 | 119 | 8.59E-23 | – | |
| SUPERFAMILY | 16 | 334 | 319 | 7.20E-49 | ||
| PANTHER | 16 | 456 | 441 | 2.60E-116 | – | |
| PANTHER | 16 | 456 | 441 | 2.60E-116 | – | |
| Gene3D | 16 | 235 | 220 | 4.00E-62 | ||
| Pfam | 18 | 48 | 31 | 3.80E-06 | ||
| ProSiteProfiles | 20 | 51 | 32 | 11.392 | ||
| SMART | 51 | 91 | 41 | 1.10E-06 | ||
| Pfam | 53 | 90 | 38 | 2.30E-05 | ||
| ProSiteProfiles | 62 | 104 | 43 | 9.572 | ||
| SMART | 93 | 133 | 41 | 10 | ||
| CDD | 98 | 211 | 114 | 5.67E-15 | – | |
| SMART | 135 | 175 | 41 | 16 | ||
| ProSiteProfiles | 146 | 188 | 43 | 10.062 | ||
| SMART | 176 | 216 | 41 | 6 | ||
| ProSiteProfiles | 187 | 229 | 43 | 11.322 | ||
| Gene3D | 269 | 333 | 65 | 4.00E-62 | ||
| SMART | 291 | 331 | 41 | 8.8 | ||
| SUPERFAMILY | 342 | 454 | 113 | 5.49E-29 | ||
| Gene3D | 352 | 456 | 105 | 2.10E-31 | – | |
| Pfam | 354 | 456 | 103 | 2.40E-25 | ||
| ProSiteProfiles | 361 | 428 | 68 | 18.617 | ||
| SMART | 361 | 458 | 98 | 1.90E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0343689.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0343689.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.