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PF00152

Source: Pfam

Description

tRNA synthetases class II (D, K and N)

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000166
Molecular function Nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
Subterm of
GO:0004812
Molecular function Aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006418
Biological process TRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis.
Subterm of
Part of

Associated Lotus transcripts 35

Transcript Name Description Predicted domains Domain count
Lj0g3v0000769.1
– PREDICTED: asparagine--tRNA ligase, cytoplasmic 1-like [Cicer arietinum] gi|502138744|ref|XP_004503515.1|
Domains
7
Lj0g3v0190569.1
– PREDICTED: lysyl-tRNA synthetase-like [Glycine max] gi|356533832|ref|XP_003535462.1|
Domains
19
Lj0g3v0296079.1
– Asparaginyl-tRNA synthetase [Medicago truncatula] gi|357513179|ref|XP_003626878.1|
Domains
9
Lj0g3v0358409.1
– PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502162327|ref|XP_004512467.1|
Domains
17
Lj2g3v0878960.1
– PREDICTED: lysyl-tRNA synthetase-like [Glycine max] gi|356504551|ref|XP_003521059.1|
Domains
23
Lj2g3v3106130.1
– PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502125110|ref|XP_004498802.1|
Domains
20
Lj3g3v2656760.1
– PREDICTED: asparagine--tRNA ligase, cytoplasmic 1-like [Cicer arietinum] gi|502138744|ref|XP_004503515.1|
Domains
18
Lj4g3v1259110.1
– PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial-like [Cicer arietinum] gi|502152388|ref|XP_004508904.1|
Domains
17
Lj4g3v1259110.2
– PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial-like [Cicer arietinum] gi|502152388|ref|XP_004508904.1|
Domains
22
Lj4g3v2120450.1
– PREDICTED: lysyl-tRNA synthetase-like [Glycine max] gi|356533832|ref|XP_003535462.1|
Domains
24
Lj4g3v3020560.1
– PREDICTED: asparagine--tRNA ligase, cytoplasmic 1-like [Cicer arietinum] gi|502138744|ref|XP_004503515.1|
Domains
28
Lj4g3v3109640.1
– PREDICTED: aspartate--tRNA ligase-like isoform X1 [Cicer arietinum] gi|502138374|ref|XP_004503382.1|
Domains
31
Lj4g3v3109640.2
– PREDICTED: aspartate--tRNA ligase-like isoform X1 [Cicer arietinum] gi|502138374|ref|XP_004503382.1|
Domains
14
Lj5g3v0508080.1
– PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502125110|ref|XP_004498802.1|
Domains
20
LotjaGi2g1v0226400.1
– Lysine--tRNA ligase; TAIR: AT3G13490.1 Lysyl-tRNA synthetase, class II; Swiss-Prot: sp|Q9LJE2|SYKM_ARATH Lysine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151TGE1|A0A151TGE1_CAJCA Lysine--tRNA ligase; Found in the gene: LotjaGi2g1v0226400
Domains
22
LotjaGi2g1v0226400.2
– Lysine--tRNA ligase; TAIR: AT3G13490.1 Lysyl-tRNA synthetase, class II; Swiss-Prot: sp|Q9LJE2|SYKM_ARATH Lysine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072TKF3|A0A072TKF3_MEDTR Lysine--tRNA ligase; Found in the gene: LotjaGi2g1v0226400
Domains
13
LotjaGi2g1v0226400.3
– Lysine--tRNA ligase; TAIR: AT3G13490.1 Lysyl-tRNA synthetase, class II; Swiss-Prot: sp|Q9LJE2|SYKM_ARATH Lysine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072TKF3|A0A072TKF3_MEDTR Lysine--tRNA ligase; Found in the gene: LotjaGi2g1v0226400
Domains
15
LotjaGi3g1v0268500.1
– Asparagine-tRNA ligase; TAIR: AT3G07420.1 asparaginyl-tRNA synthetase 2; Swiss-Prot: sp|Q9SW95|SYNC2_ARATH Asparagine--tRNA ligase, cytoplasmic 2; TrEMBL-Plants: tr|G7LED0|G7LED0_MEDTR Asparagine-tRNA ligase; Found in the gene: LotjaGi3g1v0268500
Domains
7
LotjaGi3g1v0417100.1
– Asparagine--tRNA ligase; TAIR: AT5G56680.1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein; Swiss-Prot: sp|Q9SW96|SYNC1_ARATH Asparagine--tRNA ligase, cytoplasmic 1; TrEMBL-Plants: tr|I1K622|I1K622_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0417100
Domains
10
LotjaGi4g1v0203000.1
– Asparagine-tRNA ligase; TAIR: AT4G17300.2 Class II aminoacyl-tRNA and biotin synthetases superfamily protein; Swiss-Prot: sp|O48593|SYNO_ARATH Asparagine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7JIW4|G7JIW4_MEDTR Asparagine-tRNA ligase; Found in the gene: LotjaGi4g1v0203000
Domains
18
LotjaGi4g1v0203000.2
– Asparagine-tRNA ligase; TAIR: AT4G17300.1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein; Swiss-Prot: sp|O48593|SYNO_ARATH Asparagine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7JIW4|G7JIW4_MEDTR Asparagine-tRNA ligase; Found in the gene: LotjaGi4g1v0203000
Domains
9
LotjaGi4g1v0302800.2
– Lysine--tRNA ligase; TAIR: AT3G11710.1 lysyl-tRNA synthetase 1; Swiss-Prot: sp|Q9ZPI1|SYKC_ARATH Lysine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1LZI3|I1LZI3_SOYBN Lysine--tRNA ligase; Found in the gene: LotjaGi4g1v0302800
Domains
24
LotjaGi4g1v0302800.3
– Lysine--tRNA ligase; TAIR: AT3G11710.1 lysyl-tRNA synthetase 1; Swiss-Prot: sp|Q9ZPI1|SYKC_ARATH Lysine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1L9B1|I1L9B1_SOYBN Lysine--tRNA ligase; Found in the gene: LotjaGi4g1v0302800
Domains
24
LotjaGi4g1v0302800.4
– Lysine--tRNA ligase; TAIR: AT3G11710.1 lysyl-tRNA synthetase 1; Swiss-Prot: sp|Q6F2U9|SYK_ORYSJ Lysine--tRNA ligase; TrEMBL-Plants: tr|A0A1J7IH24|A0A1J7IH24_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0302800
Domains
13
LotjaGi4g1v0442400.1
– Asparagine--tRNA ligase; TAIR: AT5G56680.1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein; Swiss-Prot: sp|Q9SW96|SYNC1_ARATH Asparagine--tRNA ligase, cytoplasmic 1; TrEMBL-Plants: tr|I1K622|I1K622_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0442400
Domains
10
LotjaGi4g1v0442400.2
– Asparagine--tRNA ligase; TAIR: AT5G56680.1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein; Swiss-Prot: sp|Q9SW96|SYNC1_ARATH Asparagine--tRNA ligase, cytoplasmic 1; TrEMBL-Plants: tr|V7CQ72|V7CQ72_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0442400
Domains
25
LotjaGi4g1v0454600.1
– Aspartate--tRNA ligase; TAIR: AT4G33760.1 tRNA synthetase class II (D, K and N) family protein; Swiss-Prot: sp|F4JJT9|SYDM_ARATH Aspartate--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151T3C0|A0A151T3C0_CAJCA Aspartyl-tRNA synthetase; Found in the gene: LotjaGi4g1v0454600
Domains
30
LotjaGi4g1v0454600.2
– Aspartate--tRNA ligase; TAIR: AT4G33760.1 tRNA synthetase class II (D, K and N) family protein; Swiss-Prot: sp|F4JJT9|SYDM_ARATH Aspartate--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151T3C0|A0A151T3C0_CAJCA Aspartyl-tRNA synthetase; Found in the gene: LotjaGi4g1v0454600
Domains
28
LotjaGi5g1v0052700.1
– Aspartate-tRNA ligase; TAIR: AT4G31180.1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein; Swiss-Prot: sp|Q9M084|SYDC2_ARATH Aspartate--tRNA ligase 2, cytoplasmic; TrEMBL-Plants: tr|I1M984|I1M984_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0052700
Domains
20
LotjaGi5g1v0052700.2
– Aspartate-tRNA ligase; TAIR: AT4G31180.1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein; Swiss-Prot: sp|Q9M084|SYDC2_ARATH Aspartate--tRNA ligase 2, cytoplasmic; TrEMBL-Plants: tr|A0A0L9V226|A0A0L9V226_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0052700
Domains
11
LotjaGi6g1v0240700.1
– Lysine--tRNA ligase; TAIR: AT3G11710.1 lysyl-tRNA synthetase 1; Swiss-Prot: sp|Q9ZPI1|SYKC_ARATH Lysine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1LZI3|I1LZI3_SOYBN Lysine--tRNA ligase; Found in the gene: LotjaGi6g1v0240700
Domains
30
LotjaGi6g1v0240700.2
– Lysine--tRNA ligase; TAIR: AT3G11710.1 lysyl-tRNA synthetase 1; Swiss-Prot: sp|Q9ZPI1|SYKC_ARATH Lysine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1LZI3|I1LZI3_SOYBN Lysine--tRNA ligase; Found in the gene: LotjaGi6g1v0240700
Domains
22
LotjaGi6g1v0240700.3
– Lysine--tRNA ligase; TAIR: AT3G11710.1 lysyl-tRNA synthetase 1; Swiss-Prot: sp|Q9ZPI1|SYKC_ARATH Lysine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1LZI3|I1LZI3_SOYBN Lysine--tRNA ligase; Found in the gene: LotjaGi6g1v0240700
Domains
24
LotjaGi6g1v0240700.4
– Lysine--tRNA ligase; TAIR: AT3G11710.1 lysyl-tRNA synthetase 1; Swiss-Prot: sp|Q6F2U9|SYK_ORYSJ Lysine--tRNA ligase; TrEMBL-Plants: tr|I1LZI3|I1LZI3_SOYBN Lysine--tRNA ligase; Found in the gene: LotjaGi6g1v0240700
Domains
11
LotjaGi6g1v0240700.5
– Lysine--tRNA ligase; TAIR: AT3G11710.1 lysyl-tRNA synthetase 1; Swiss-Prot: sp|Q9ZPI1|SYKC_ARATH Lysine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1LZI3|I1LZI3_SOYBN Lysine--tRNA ligase; Found in the gene: LotjaGi6g1v0240700
Domains
24

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 2.86