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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0053660 |
| Transcript ID | Lj1g3v0053660.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cicer arietinum] gi|502159272|ref|XP_004511450.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 25 | 25 | – | – | |
| SUPERFAMILY | 44 | 402 | 359 | 3.08E-55 | ||
| PANTHER | 52 | 695 | 644 | 1.60E-204 | – | |
| PANTHER | 52 | 695 | 644 | 1.60E-204 | – | |
| Gene3D | 54 | 403 | 350 | 6.90E-87 | ||
| SMART | 74 | 126 | 53 | 91 | ||
| CDD | 80 | 216 | 137 | 2.67E-14 | – | |
| ProSiteProfiles | 85 | 139 | 55 | 8.557 | ||
| SMART | 127 | 175 | 49 | 5.50E-05 | ||
| ProSiteProfiles | 138 | 188 | 51 | 10.657 | ||
| SMART | 177 | 217 | 41 | 2.90E-07 | ||
| CDD | 184 | 301 | 118 | 2.81E-22 | – | |
| Pfam | 184 | 216 | 33 | 2.60E-07 | ||
| ProSiteProfiles | 188 | 223 | 36 | 12.267 | ||
| Pfam | 219 | 258 | 40 | 1.80E-07 | ||
| SMART | 219 | 259 | 41 | 2.40E-06 | ||
| ProSiteProfiles | 230 | 272 | 43 | 9.537 | ||
| SMART | 261 | 301 | 41 | 1.8 | ||
| CDD | 267 | 379 | 113 | 3.74E-16 | – | |
| Pfam | 303 | 342 | 40 | 3.60E-05 | ||
| SMART | 303 | 343 | 41 | 0.014 | ||
| ProSiteProfiles | 314 | 356 | 43 | 10.867 | ||
| SMART | 344 | 384 | 41 | 5.4 | ||
| ProSiteProfiles | 355 | 397 | 43 | 9.887 | ||
| SUPERFAMILY | 429 | 500 | 72 | 6.47E-08 | ||
| Gene3D | 437 | 501 | 65 | 6.90E-87 | ||
| SMART | 459 | 499 | 41 | 22 | ||
| Gene3D | 523 | 628 | 106 | 1.50E-31 | – | |
| SUPERFAMILY | 523 | 624 | 102 | 1.02E-29 | ||
| Pfam | 524 | 624 | 101 | 8.30E-26 | ||
| SMART | 531 | 628 | 98 | 5.50E-24 | ||
| ProSiteProfiles | 531 | 598 | 68 | 18.72 | ||
| SUPERFAMILY | 575 | 602 | 28 | 6.47E-08 | ||
| CDD | 628 | 674 | 47 | 3.92E-05 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v0053660.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0053660.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.