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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0053660 |
| Transcript ID | Lj1g3v0053660.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cicer arietinum] gi|502159272|ref|XP_004511450.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 55 | 425 | 371 | 8.90E-87 | ||
| SUPERFAMILY | 56 | 418 | 363 | 9.88E-56 | ||
| SMART | 96 | 148 | 53 | 65 | ||
| PANTHER | 97 | 717 | 621 | 9.10E-200 | – | |
| PANTHER | 97 | 717 | 621 | 9.10E-200 | – | |
| CDD | 102 | 238 | 137 | 2.20E-14 | – | |
| ProSiteProfiles | 107 | 161 | 55 | 8.557 | ||
| SMART | 149 | 197 | 49 | 5.50E-05 | ||
| ProSiteProfiles | 160 | 210 | 51 | 10.657 | ||
| SMART | 199 | 239 | 41 | 2.90E-07 | ||
| Pfam | 206 | 238 | 33 | 2.70E-07 | ||
| CDD | 206 | 323 | 118 | 2.21E-22 | – | |
| ProSiteProfiles | 210 | 245 | 36 | 12.267 | ||
| Pfam | 241 | 280 | 40 | 1.80E-07 | ||
| SMART | 241 | 281 | 41 | 2.40E-06 | ||
| ProSiteProfiles | 252 | 294 | 43 | 9.537 | ||
| SMART | 283 | 323 | 41 | 1.8 | ||
| CDD | 289 | 401 | 113 | 3.03E-16 | – | |
| SMART | 325 | 365 | 41 | 0.014 | ||
| Pfam | 325 | 364 | 40 | 3.80E-05 | ||
| ProSiteProfiles | 336 | 378 | 43 | 10.867 | ||
| SMART | 366 | 406 | 41 | 5.4 | ||
| ProSiteProfiles | 377 | 419 | 43 | 9.887 | ||
| SUPERFAMILY | 452 | 517 | 66 | 9.88E-56 | ||
| Gene3D | 459 | 523 | 65 | 8.90E-87 | ||
| SMART | 481 | 521 | 41 | 22 | ||
| Gene3D | 545 | 650 | 106 | 1.50E-31 | – | |
| SUPERFAMILY | 545 | 646 | 102 | 1.10E-29 | ||
| Pfam | 546 | 646 | 101 | 8.70E-26 | ||
| ProSiteProfiles | 553 | 620 | 68 | 18.72 | ||
| SMART | 553 | 650 | 98 | 5.50E-24 | ||
| CDD | 650 | 696 | 47 | 4.39E-05 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v0053660.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0053660.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.