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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0112960 |
| Transcript ID | Lj1g3v0112960.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Leucine-rich repeat protein kinase family protein isoform 1 [Theobroma cacao] gi|508713910|gb|EOY05807.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 41 | 41 | – | – | |
| Gene3D | 25 | 276 | 252 | 5.10E-39 | ||
| SUPERFAMILY | 43 | 274 | 232 | 1.57E-32 | – | |
| SMART | 83 | 105 | 23 | 260 | ||
| PANTHER | 112 | 351 | 240 | 0 | – | |
| PANTHER | 112 | 351 | 240 | 0 | – | |
| SMART | 179 | 198 | 20 | 33 | – | |
| SMART | 179 | 202 | 24 | 0.022 | ||
| SMART | 179 | 204 | 26 | 24 | – | |
| ProSiteProfiles | 181 | 202 | 22 | 8.374 | ||
| PRINTS | 182 | 195 | 14 | 6.00E-05 | – | |
| SMART | 202 | 221 | 20 | 77 | – | |
| Pfam | 207 | 262 | 56 | 8.20E-07 | ||
| SMART | 225 | 246 | 22 | 18 | – | |
| SMART | 225 | 244 | 20 | 15 | – | |
| PRINTS | 225 | 238 | 14 | 6.00E-05 | – | |
| SMART | 225 | 248 | 24 | 2.4 | ||
| ProSiteProfiles | 227 | 248 | 22 | 8.906 | ||
| SMART | 249 | 270 | 22 | 670 | – | |
| SMART | 249 | 275 | 27 | 68 | ||
| ProSiteProfiles | 251 | 272 | 22 | 6.957 | ||
| PANTHER | 441 | 502 | 62 | 0 | – | |
| PANTHER | 441 | 502 | 62 | 0 | – | |
| PANTHER | 518 | 660 | 143 | 0 | – | |
| PANTHER | 518 | 660 | 143 | 0 | – | |
| Pfam | 656 | 737 | 82 | 2.80E-13 | – | |
| SUPERFAMILY | 682 | 740 | 59 | 5.89E-05 | – | |
| PANTHER | 688 | 767 | 80 | 0 | – | |
| PANTHER | 688 | 767 | 80 | 0 | – | |
| SMART | 788 | 1108 | 321 | 1.70E-37 | ||
| ProSiteProfiles | 788 | 1101 | 314 | 34.76 | ||
| SUPERFAMILY | 800 | 1101 | 302 | 5.26E-53 | ||
| Gene3D | 802 | 880 | 79 | 5.40E-06 | – | |
| PANTHER | 813 | 1105 | 293 | 0 | – | |
| PANTHER | 813 | 1105 | 293 | 0 | – | |
| Pfam | 816 | 1099 | 284 | 9.30E-42 | ||
| Gene3D | 881 | 1099 | 219 | 1.30E-44 | – | |
| ProSitePatterns | 921 | 933 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v0112960.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0112960.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.