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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1500470 |
| Transcript ID | Lj1g3v1500470.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Cicer arietinum] gi|502133303|ref|XP_004501712.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 39 | 39 | – | – | |
| Phobius | 1 | 508 | 508 | – | – | |
| PANTHER | 1 | 371 | 371 | 3.40E-303 | – | |
| PANTHER | 1 | 371 | 371 | 3.40E-303 | – | |
| SUPERFAMILY | 44 | 160 | 117 | 6.06E-25 | – | |
| Gene3D | 45 | 163 | 119 | 3.00E-29 | – | |
| ProSiteProfiles | 51 | 108 | 58 | 10.278 | ||
| Pfam | 52 | 98 | 47 | 4.10E-07 | ||
| CDD | 53 | 165 | 113 | 1.01E-41 | – | |
| SMART | 54 | 102 | 49 | 8.10E-05 | ||
| Pfam | 113 | 156 | 44 | 4.40E-05 | ||
| ProSiteProfiles | 117 | 175 | 59 | 9.088 | ||
| SMART | 120 | 164 | 45 | 0.72 | ||
| Gene3D | 214 | 328 | 115 | 1.70E-24 | – | |
| ProSiteProfiles | 216 | 275 | 60 | 8.97 | ||
| Pfam | 221 | 266 | 46 | 0.0011 | ||
| CDD | 221 | 319 | 99 | 1.99E-43 | – | |
| SMART | 222 | 269 | 48 | 0.0076 | ||
| SUPERFAMILY | 222 | 334 | 113 | 3.79E-22 | – | |
| Pfam | 280 | 330 | 51 | 2.10E-04 | ||
| ProSiteProfiles | 284 | 345 | 62 | 9.639 | ||
| SMART | 287 | 335 | 49 | 10 | ||
| MobiDBLite | 361 | 392 | 32 | – | – | |
| SUPERFAMILY | 391 | 486 | 96 | 6.17E-17 | – | |
| Gene3D | 396 | 482 | 87 | 6.00E-21 | – | |
| ProSiteProfiles | 397 | 484 | 88 | 19.835 | ||
| Pfam | 399 | 482 | 84 | 3.60E-12 | ||
| SMART | 399 | 484 | 86 | 1.80E-15 | ||
| CDD | 400 | 483 | 84 | 4.14E-32 | – | |
| PANTHER | 420 | 531 | 112 | 3.40E-303 | – | |
| PANTHER | 420 | 531 | 112 | 3.40E-303 | – | |
| TMHMM | 507 | 529 | 23 | – | – | |
| Phobius | 509 | 529 | 21 | – | – | |
| Phobius | 530 | 532 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v1500470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1500470.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.