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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1500470 |
| Transcript ID | Lj1g3v1500470.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Glycine max] gi|356508821|ref|XP_003523152.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 38 | 38 | 6.303 | ||
| Gene3D | 1 | 93 | 93 | 2.60E-22 | – | |
| PANTHER | 1 | 301 | 301 | 1.90E-274 | – | |
| Phobius | 1 | 438 | 438 | – | – | |
| SUPERFAMILY | 1 | 89 | 89 | 8.46E-18 | – | |
| PANTHER | 1 | 301 | 301 | 1.90E-274 | – | |
| Pfam | 43 | 86 | 44 | 3.50E-05 | ||
| ProSiteProfiles | 47 | 105 | 59 | 9.088 | ||
| SMART | 50 | 94 | 45 | 0.72 | ||
| Gene3D | 144 | 258 | 115 | 1.30E-24 | – | |
| ProSiteProfiles | 146 | 205 | 60 | 8.97 | ||
| CDD | 151 | 249 | 99 | 1.62E-43 | – | |
| Pfam | 151 | 196 | 46 | 9.10E-04 | ||
| SUPERFAMILY | 152 | 264 | 113 | 2.65E-22 | – | |
| SMART | 152 | 199 | 48 | 0.0076 | ||
| Pfam | 210 | 260 | 51 | 1.70E-04 | ||
| ProSiteProfiles | 214 | 275 | 62 | 9.639 | ||
| SMART | 217 | 265 | 49 | 10 | ||
| MobiDBLite | 291 | 322 | 32 | – | – | |
| SUPERFAMILY | 321 | 416 | 96 | 4.77E-17 | – | |
| Gene3D | 326 | 412 | 87 | 4.80E-21 | – | |
| ProSiteProfiles | 327 | 414 | 88 | 19.835 | ||
| SMART | 329 | 414 | 86 | 1.80E-15 | ||
| Pfam | 329 | 412 | 84 | 2.90E-12 | ||
| CDD | 330 | 413 | 84 | 4.11E-32 | – | |
| PANTHER | 350 | 461 | 112 | 1.90E-274 | – | |
| PANTHER | 350 | 461 | 112 | 1.90E-274 | – | |
| TMHMM | 437 | 459 | 23 | – | – | |
| Phobius | 439 | 459 | 21 | – | – | |
| Phobius | 460 | 462 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v1500470.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1500470.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.