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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1548700 |
| Transcript ID | Lj1g3v1548700.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: BEACH domain-containing protein lvsC-like [Cicer arietinum] gi|502133135|ref|XP_004501660.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 30 | 30 | – | – | |
| Phobius | 31 | 47 | 17 | – | – | |
| Phobius | 48 | 88 | 41 | – | – | |
| Phobius | 89 | 109 | 21 | – | – | |
| Phobius | 110 | 1155 | 1046 | – | – | |
| PANTHER | 514 | 1552 | 1039 | 0 | – | |
| PANTHER | 514 | 1552 | 1039 | 0 | – | |
| Gene3D | 655 | 737 | 83 | 6.10E-09 | ||
| SUPERFAMILY | 783 | 844 | 62 | 1.90E-07 | ||
| Gene3D | 784 | 838 | 55 | 6.10E-09 | ||
| SUPERFAMILY | 888 | 1079 | 192 | 6.51E-20 | ||
| Gene3D | 893 | 1080 | 188 | 6.50E-13 | ||
| Pfam | 899 | 1070 | 172 | 5.00E-08 | – | |
| Gene3D | 1110 | 1111 | 2 | 6.10E-09 | ||
| Pfam | 1141 | 1420 | 280 | 1.00E-77 | ||
| Phobius | 1156 | 1174 | 19 | – | – | |
| Gene3D | 1156 | 1175 | 20 | 6.10E-09 | ||
| SUPERFAMILY | 1161 | 1242 | 82 | 1.90E-07 | ||
| Phobius | 1175 | 2488 | 1314 | – | – | |
| SUPERFAMILY | 1361 | 1463 | 103 | 1.90E-07 | ||
| Gene3D | 1393 | 1467 | 75 | 6.10E-09 | ||
| SUPERFAMILY | 1543 | 1591 | 49 | 1.90E-07 | ||
| Gene3D | 1544 | 1588 | 45 | 6.10E-09 | ||
| PANTHER | 1587 | 2116 | 530 | 0 | – | |
| PANTHER | 1587 | 2116 | 530 | 0 | – | |
| Pfam | 2014 | 2109 | 96 | 7.70E-12 | – | |
| PANTHER | 2149 | 2243 | 95 | 0 | – | |
| PANTHER | 2149 | 2243 | 95 | 0 | – | |
| MobiDBLite | 2164 | 2209 | 46 | – | – | |
| SUPERFAMILY | 2213 | 2255 | 43 | 1.11E-18 | ||
| Gene3D | 2213 | 2254 | 42 | 9.10E-20 | ||
| CDD | 2214 | 2369 | 156 | 3.15E-18 | – | |
| PANTHER | 2299 | 3058 | 760 | 0 | – | |
| PANTHER | 2299 | 3058 | 760 | 0 | – | |
| Gene3D | 2303 | 2362 | 60 | 9.10E-20 | ||
| SUPERFAMILY | 2304 | 2367 | 64 | 1.11E-18 | ||
| Pfam | 2310 | 2365 | 56 | 1.00E-11 | ||
| ProSiteProfiles | 2390 | 2680 | 291 | 120.36 | ||
| SUPERFAMILY | 2397 | 2680 | 284 | 2.88E-123 | ||
| Gene3D | 2399 | 2680 | 282 | 8.60E-132 | ||
| SMART | 2402 | 2680 | 279 | 1.30E-197 | ||
| Pfam | 2404 | 2680 | 277 | 1.20E-124 | ||
| CDD | 2405 | 2680 | 276 | 8.18E-145 | ||
| Phobius | 2489 | 2506 | 18 | – | – | |
| Phobius | 2507 | 3060 | 554 | – | – | |
| SUPERFAMILY | 2787 | 3049 | 263 | 1.83E-40 | ||
| Gene3D | 2790 | 3043 | 254 | 3.80E-44 | ||
| SMART | 2813 | 2852 | 40 | 1.20E-06 | ||
| Pfam | 2816 | 2851 | 36 | 3.00E-05 | ||
| ProSiteProfiles | 2820 | 3050 | 231 | 14.397 | ||
| ProSiteProfiles | 2820 | 2861 | 42 | 13.616 | ||
| ProSitePatterns | 2839 | 2853 | 15 | – | ||
| SMART | 2878 | 2917 | 40 | 0.0081 | ||
| Pfam | 2881 | 2914 | 34 | 0.019 | ||
| SMART | 2920 | 2960 | 41 | 1.2 | ||
| SMART | 2962 | 3000 | 39 | 23 | ||
| SMART | 3003 | 3041 | 39 | 1.4 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v1548700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1548700.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.